RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 GP5P40197 560 aa16.2■□□□□ 0.18
CD9-209ENST00000540891 PRDX1Q06830 199 aaKnown RBP16.2■□□□□ 0.18
CD9-209ENST00000540891 CDC20Q12834 499 aa16.2■□□□□ 0.18
CD9-209ENST00000540891 TSTA3Q13630 321 aaPredicted RBP16.2■□□□□ 0.18
CD9-209ENST00000540891 PTCHD3Q3KNS1 767 aa16.2■□□□□ 0.18
CD9-209ENST00000540891 GLE1Q53GS7 698 aaKnown RBP16.2■□□□□ 0.18
CD9-209ENST00000540891 ZC3H12BQ5HYM0 836 aaKnown RBP16.2■□□□□ 0.18
CD9-209ENST00000540891 ATP1A1-AS1Q5TC04 95 aa16.2■□□□□ 0.18
CD9-209ENST00000540891 ICE2Q659A1 982 aa16.2■□□□□ 0.18
CD9-209ENST00000540891 ZNF425Q6IV72 752 aa16.2■□□□□ 0.18
CD9-209ENST00000540891 RHBDD2Q6NTF9 364 aa16.2■□□□□ 0.18
CD9-209ENST00000540891 FBXO42Q6P3S6 717 aa16.2■□□□□ 0.18
CD9-209ENST00000540891 TLDC1Q6P9B6 456 aa16.2■□□□□ 0.18
CD9-209ENST00000540891 FAM198BQ6UWH4 519 aa16.2■□□□□ 0.18
CD9-209ENST00000540891 RNF44Q7L0R7 432 aa16.2■□□□□ 0.18
CD9-209ENST00000540891 PAQR7Q86WK9 346 aa16.2■□□□□ 0.18
CD9-209ENST00000540891 CEP112Q8N8E3 955 aa16.2■□□□□ 0.18
CD9-209ENST00000540891 CCDC138Q96M89 665 aa16.2■□□□□ 0.18
CD9-209ENST00000540891 GPR22Q99680 433 aa16.2■□□□□ 0.18
CD9-209ENST00000540891 DPH7Q9BTV6 452 aa16.2■□□□□ 0.18
CD9-209ENST00000540891 CAB39LQ9H9S4 337 aa16.2■□□□□ 0.18
CD9-209ENST00000540891 MRPS30Q9NP92 439 aaKnown RBP16.2■□□□□ 0.18
CD9-209ENST00000540891 KCND3Q9UK17 655 aa16.2■□□□□ 0.18
CD9-209ENST00000540891 AP1M2Q9Y6Q5 423 aa16.2■□□□□ 0.18
CD9-209ENST00000540891 IGSF10Q6WRI0 2623 aa16.19■□□□□ 0.18
CD9-209ENST00000540891 KATNA1O75449 491 aa16.19■□□□□ 0.18
CD9-209ENST00000540891 FAM155BO75949 473 aa16.19■□□□□ 0.18
CD9-209ENST00000540891 ITGB2P05107 769 aa16.19■□□□□ 0.18
CD9-209ENST00000540891 KLK3P07288 261 aaPredicted RBP16.19■□□□□ 0.18
CD9-209ENST00000540891 HBQ1P09105 142 aa16.19■□□□□ 0.18
CD9-209ENST00000540891 PRKAR1AP10644 381 aa16.19■□□□□ 0.18
CD9-209ENST00000540891 STX2P32856 288 aa16.19■□□□□ 0.18
CD9-209ENST00000540891 RPS18P62269 152 aaKnown RBP16.19■□□□□ 0.18
CD9-209ENST00000540891 TBPL1P62380 186 aa16.19■□□□□ 0.18
CD9-209ENST00000540891 TBR1Q16650 682 aa16.19■□□□□ 0.18
CD9-209ENST00000540891 PPP1R3AQ16821 1122 aa16.19■□□□□ 0.18
CD9-209ENST00000540891 CRTC2Q53ET0 693 aaPredicted RBP16.19■□□□□ 0.18
CD9-209ENST00000540891 FRMPD2BQ6IN97 320 aa16.19■□□□□ 0.18
CD9-209ENST00000540891 AGTRAPQ6RW13 159 aa16.19■□□□□ 0.18
CD9-209ENST00000540891 SBSNQ6UWP8 590 aa16.19■□□□□ 0.18
CD9-209ENST00000540891 RELL1Q8IUW5 271 aa16.19■□□□□ 0.18
CD9-209ENST00000540891 CTAGE3PQ8IX95 158 aa16.19■□□□□ 0.18
CD9-209ENST00000540891 PPM1NQ8N819 430 aa16.19■□□□□ 0.18
CD9-209ENST00000540891 EXTL1Q92935 676 aa16.19■□□□□ 0.18
CD9-209ENST00000540891 GBP5Q96PP8 586 aa16.19■□□□□ 0.18
CD9-209ENST00000540891 PLCD4Q9BRC7 762 aa16.19■□□□□ 0.18
CD9-209ENST00000540891 FAM129AQ9BZQ8 928 aa16.19■□□□□ 0.18
CD9-209ENST00000540891 ATG10Q9H0Y0 220 aa16.19■□□□□ 0.18
CD9-209ENST00000540891 POPDC3Q9HBV1 291 aa16.19■□□□□ 0.18
CD9-209ENST00000540891 ABCF3Q9NUQ8 709 aa16.19■□□□□ 0.18
CD9-209ENST00000540891 NINJ2Q9NZG7 142 aa16.19■□□□□ 0.18
CD9-209ENST00000540891 DHCR7Q9UBM7 475 aaKnown RBP16.19■□□□□ 0.18
CD9-209ENST00000540891 LOC105369274A0A096LPK9 316 aa16.18■□□□□ 0.18
CD9-209ENST00000540891 LOC102723532A0A0G2JNH3 316 aa16.18■□□□□ 0.18
CD9-209ENST00000540891 A0A0J9YVX5 310 aa16.18■□□□□ 0.18
CD9-209ENST00000540891 CDC7O00311 574 aa16.18■□□□□ 0.18
CD9-209ENST00000540891 FURINP09958 794 aa16.18■□□□□ 0.18
CD9-209ENST00000540891 PTPN4P29074 926 aa16.18■□□□□ 0.18
CD9-209ENST00000540891 ABATP80404 500 aa16.18■□□□□ 0.18
CD9-209ENST00000540891 POU4F1Q01851 419 aa16.18■□□□□ 0.18
CD9-209ENST00000540891 C1orf189Q5VU69 101 aa16.18■□□□□ 0.18
CD9-209ENST00000540891 C16orf46Q6P387 395 aa16.18■□□□□ 0.18
CD9-209ENST00000540891 OR4N4Q8N0Y3 316 aa16.18■□□□□ 0.18
CD9-209ENST00000540891 NKAPQ8N5F7 415 aaKnown RBP16.18■□□□□ 0.18
CD9-209ENST00000540891 LSM14AQ8ND56 463 aaKnown RBP16.18■□□□□ 0.18
CD9-209ENST00000540891 LRRN4CLQ8ND94 238 aa16.18■□□□□ 0.18
CD9-209ENST00000540891 IFT81Q8WYA0 676 aa16.18■□□□□ 0.18
CD9-209ENST00000540891 WBP1Q96G27 269 aa16.18■□□□□ 0.18
CD9-209ENST00000540891 SELENOSQ9BQE4 189 aa16.18■□□□□ 0.18
CD9-209ENST00000540891 SGPP1Q9BX95 441 aa16.18■□□□□ 0.18
CD9-209ENST00000540891 GPR87Q9BY21 358 aa16.18■□□□□ 0.18
CD9-209ENST00000540891 SLC7A5P2Q9GIP4 190 aa16.18■□□□□ 0.18
CD9-209ENST00000540891 ACTL8Q9H568 366 aa16.18■□□□□ 0.18
CD9-209ENST00000540891 CCDC177Q9NQR7 707 aaPredicted RBP16.18■□□□□ 0.18
CD9-209ENST00000540891 STARD5Q9NSY2 213 aa16.18■□□□□ 0.18
CD9-209ENST00000540891 CUEDC1Q9NWM3 386 aaPredicted RBP16.18■□□□□ 0.18
CD9-209ENST00000540891 TXNDC16Q9P2K2 825 aa16.18■□□□□ 0.18
CD9-209ENST00000540891 ANKMY1Q9P2S6 941 aa16.18■□□□□ 0.18
CD9-209ENST00000540891 MTRF1LQ9UGC7 380 aaKnown RBP16.18■□□□□ 0.18
CD9-209ENST00000540891 SH2B3Q9UQQ2 575 aa16.18■□□□□ 0.18
CD9-209ENST00000540891 ATMQ13315 3056 aa16.18■□□□□ 0.18
CD9-209ENST00000540891 FER1L5A0AVI2 2057 aa16.17■□□□□ 0.18
CD9-209ENST00000540891 FITM1A5D6W6 292 aa16.17■□□□□ 0.18
CD9-209ENST00000540891 NPEPPSL1A6NEC2 478 aa16.17■□□□□ 0.18
CD9-209ENST00000540891 PHGDHO43175 533 aaKnown RBP16.17■□□□□ 0.18
CD9-209ENST00000540891 SRPX2O60687 465 aaPredicted RBP16.17■□□□□ 0.18
CD9-209ENST00000540891 CREG1O75629 220 aa16.17■□□□□ 0.18
CD9-209ENST00000540891 CCNDBP1O95273 360 aa16.17■□□□□ 0.18
CD9-209ENST00000540891 MED26O95402 600 aa16.17■□□□□ 0.18
CD9-209ENST00000540891 HIST1H2AGP0C0S8 130 aaPredicted RBP16.17■□□□□ 0.18
CD9-209ENST00000540891 HIST1H2ADP20671 130 aa16.17■□□□□ 0.18
CD9-209ENST00000540891 ITGAXP20702 1163 aa16.17■□□□□ 0.18
CD9-209ENST00000540891 NFKB2Q00653 900 aa16.17■□□□□ 0.18
CD9-209ENST00000540891 ILF2Q12905 390 aaKnown RBP16.17■□□□□ 0.18
CD9-209ENST00000540891 ERV3-1Q14264 604 aa16.17■□□□□ 0.18
CD9-209ENST00000540891 USP10Q14694 798 aaKnown RBP16.17■□□□□ 0.18
CD9-209ENST00000540891 NAA25Q14CX7 972 aa16.17■□□□□ 0.18
CD9-209ENST00000540891 ZKSCAN8Q15776 578 aaPredicted RBP16.17■□□□□ 0.18
CD9-209ENST00000540891 GRTP1Q5TC63 336 aa16.17■□□□□ 0.18
CD9-209ENST00000540891 PROKR1Q8TCW9 393 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms