RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 HLA-DPA1P20036 260 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 MST1P26927 711 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 NDUFS1P28331 727 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 PRDX3P30048 256 aaKnown RBP4.42□□□□□ -1.7
SNHG1-214ENST00000540865 MTIF2P46199 727 aaKnown RBP4.42□□□□□ -1.7
SNHG1-214ENST00000540865 LMAN1P49257 510 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 GPR85P60893 370 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 RPL7AP62424 266 aaKnown RBP4.42□□□□□ -1.7
SNHG1-214ENST00000540865 ARG2P78540 354 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 SRSF3P84103 164 aaKnown RBP4.42□□□□□ -1.7
SNHG1-214ENST00000540865 PRR5P85299 388 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 ITKQ08881 620 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 TMEM115Q12893 351 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-214ENST00000540865 XRCC4Q13426 336 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 GTF2H3Q13889 308 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 GALNT3Q14435 633 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 IHHQ14623 411 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 PCOLCEQ15113 449 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 SKOR2Q2VWA4 1001 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-214ENST00000540865 NKAIN1Q4KMZ8 207 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 PPP6R3Q5H9R7 873 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-214ENST00000540865 C1orf189Q5VU69 101 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 DNAJC24Q6P3W2 148 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 DCUN1D2Q6PH85 259 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 PAQR3Q6TCH7 311 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 TMCO3Q6UWJ1 677 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 KIRREL2Q6UWL6 708 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 Q6ZPB1 254 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-214ENST00000540865 LINC00696Q6ZRV3 163 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 CDHR3Q6ZTQ4 885 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 CXXC5Q7LFL8 322 aaKnown RBP4.42□□□□□ -1.7
SNHG1-214ENST00000540865 MTDHQ86UE4 582 aaKnown RBP4.42□□□□□ -1.7
SNHG1-214ENST00000540865 AMZ2Q86W34 360 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 PRIMA1Q86XR5 153 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 TRAPPC5Q8IUR0 188 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 CREBRFQ8IUR6 639 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 ATPAF2Q8N5M1 289 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 GPR26Q8NDV2 337 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 LPCAT1Q8NF37 534 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 BRSK1Q8TDC3 778 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 PHF10Q8WUB8 498 aaKnown RBP4.42□□□□□ -1.7
SNHG1-214ENST00000540865 SLC20A1Q8WUM9 679 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 HAS2Q92819 552 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 THOC3Q96J01 351 aaKnown RBP4.42□□□□□ -1.7
SNHG1-214ENST00000540865 MAGED4Q96JG8 741 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 MCEEQ96PE7 176 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 VPS35Q96QK1 796 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 KCNJ15Q99712 375 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 TMEM121Q9BTD3 319 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 SNRNP25Q9BV90 132 aaKnown RBP4.42□□□□□ -1.7
SNHG1-214ENST00000540865 KRTAP9-3Q9BYQ3 159 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 CHRNA10Q9GZZ6 450 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 KIR3DX1Q9H7L2 352 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 ZWILCHQ9H900 591 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 MRM3Q9HC36 420 aaKnown RBP4.42□□□□□ -1.7
SNHG1-214ENST00000540865 PCDH9Q9HC56 1237 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 NT5MQ9NPB1 228 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 CCM2LQ9NUG4 571 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-214ENST00000540865 IMP3Q9NV31 184 aaKnown RBP4.42□□□□□ -1.7
SNHG1-214ENST00000540865 HAUS2Q9NVX0 235 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 FAM53CQ9NYF3 392 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 DTLQ9NZJ0 730 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 CWC15Q9P013 229 aaKnown RBP4.42□□□□□ -1.7
SNHG1-214ENST00000540865 KCNN3Q9UGI6 736 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 AMACRQ9UHK6 382 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 TINAGQ9UJW2 476 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 CDC23Q9UJX2 597 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 CDYLQ9Y232 598 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 ZNF835Q9Y2P0 537 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 MEMO1Q9Y316 297 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 ATP6V1DQ9Y5K8 247 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 HS3ST3B1Q9Y662 390 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 COLEC10Q9Y6Z7 277 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 MDC1Q14676 2089 aaKnown RBP4.42□□□□□ -1.7
SNHG1-214ENST00000540865 MXRA5Q9NR99 2828 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 PIKFYVEQ9Y2I7 2098 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 C17orf113A0A1B0GUU1 675 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 KLHL33A6NCF5 533 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 E9PLN8 166 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 ZSCAN9O15535 394 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-214ENST00000540865 PRAMEF2O60811 474 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 ALOX12BO75342 701 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 POP7O75817 140 aaKnown RBP4.41□□□□□ -1.7
SNHG1-214ENST00000540865 OR2B3O76000 313 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 USP1O94782 785 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 KLHL18O94889 574 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 ZRANB2O95218 330 aaKnown RBP eCLIP4.41□□□□□ -1.73e-9■■■■■ 27.5
SNHG1-214ENST00000540865 CRTAMO95727 393 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 MLYCDO95822 493 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 ONECUT2O95948 504 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 HSP90AA1P07900 732 aaKnown RBP4.41□□□□□ -1.7
SNHG1-214ENST00000540865 MYBL2P10244 700 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 PIM1P11309 404 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-214ENST00000540865 COL6A2P12110 1019 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 ST6GAL1P15907 406 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 UGT1A4P22310 534 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 FDXRP22570 491 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 GRK2P25098 689 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 SERPINB6P35237 376 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 GRK3P35626 688 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms