RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 CACNA1IQ9P0X4 2223 aa23.72■■□□□ 1.39
TTC3-225ENST00000540756 TRBV23OR9-2A0A075B6M9 112 aa23.71■■□□□ 1.39
TTC3-225ENST00000540756 KCNJ13O60928 360 aa23.71■■□□□ 1.39
TTC3-225ENST00000540756 SH3BGRLO75368 114 aa23.71■■□□□ 1.39
TTC3-225ENST00000540756 RSL1D1O76021 490 aaKnown RBP23.71■■□□□ 1.39
TTC3-225ENST00000540756 EZRP15311 586 aaKnown RBP23.71■■□□□ 1.39
TTC3-225ENST00000540756 CAPN3P20807 821 aa23.71■■□□□ 1.39
TTC3-225ENST00000540756 PCDH1Q08174 1060 aa23.71■■□□□ 1.39
TTC3-225ENST00000540756 REP15Q6BDI9 236 aa23.71■■□□□ 1.39
TTC3-225ENST00000540756 ULK2Q8IYT8 1036 aa23.71■■□□□ 1.39
TTC3-225ENST00000540756 KYQ8NBH2 561 aa23.71■■□□□ 1.39
TTC3-225ENST00000540756 A0A1W2PPV9 198 aa23.71■■□□□ 1.39
TTC3-225ENST00000540756 MAOBP27338 520 aa23.71■■□□□ 1.39
TTC3-225ENST00000540756 ACTR1BP42025 376 aa23.71■■□□□ 1.39
TTC3-225ENST00000540756 RABIFP47224 123 aa23.71■■□□□ 1.39
TTC3-225ENST00000540756 ACTR1AP61163 376 aa23.71■■□□□ 1.39
TTC3-225ENST00000540756 PTGR1Q14914 329 aa23.71■■□□□ 1.39
TTC3-225ENST00000540756 KIAA0040Q15053 153 aa23.71■■□□□ 1.39
TTC3-225ENST00000540756 CYP2A13Q16696 494 aa23.71■■□□□ 1.39
TTC3-225ENST00000540756 PRAMEF14Q5SWL7 426 aa23.71■■□□□ 1.39
TTC3-225ENST00000540756 PRAMEF13Q5VWM6 474 aa23.71■■□□□ 1.39
TTC3-225ENST00000540756 CYP20A1Q6UW02 462 aa23.71■■□□□ 1.39
TTC3-225ENST00000540756 RETREG3Q86VR2 466 aa23.71■■□□□ 1.39
TTC3-225ENST00000540756 NRROSQ86YC3 692 aa23.71■■□□□ 1.39
TTC3-225ENST00000540756 ZNF740Q8NDX6 193 aa23.71■■□□□ 1.39
TTC3-225ENST00000540756 PROKR1Q8TCW9 393 aa23.71■■□□□ 1.39
TTC3-225ENST00000540756 SLC5A11Q8WWX8 675 aa23.71■■□□□ 1.39
TTC3-225ENST00000540756 APIPQ96GX9 242 aa23.71■■□□□ 1.39
TTC3-225ENST00000540756 DENND2DQ9H6A0 471 aaPredicted RBP23.71■■□□□ 1.39
TTC3-225ENST00000540756 EFCAB1Q9HAE3 211 aa23.71■■□□□ 1.39
TTC3-225ENST00000540756 SLC52A3Q9NQ40 469 aa23.71■■□□□ 1.39
TTC3-225ENST00000540756 GEMIN8Q9NWZ8 242 aaKnown RBP23.71■■□□□ 1.39
TTC3-225ENST00000540756 GPRC5BQ9NZH0 403 aa23.71■■□□□ 1.39
TTC3-225ENST00000540756 THEGQ9P2T0 379 aa23.71■■□□□ 1.39
TTC3-225ENST00000540756 TAC3Q9UHF0 121 aa23.71■■□□□ 1.39
TTC3-225ENST00000540756 BAIAP2L1Q9UHR4 511 aa23.71■■□□□ 1.39
TTC3-225ENST00000540756 DYRK1BQ9Y463 629 aa23.71■■□□□ 1.39
TTC3-225ENST00000540756 GOLGA4Q13439 2230 aaKnown RBP23.7■■□□□ 1.39
TTC3-225ENST00000540756 EML5Q05BV3 1969 aa23.7■■□□□ 1.38
TTC3-225ENST00000540756 TNFRSF10CO14798 259 aa23.7■■□□□ 1.38
TTC3-225ENST00000540756 MGRN1O60291 552 aa23.7■■□□□ 1.38
TTC3-225ENST00000540756 PDE5AO76074 875 aa23.7■■□□□ 1.38
TTC3-225ENST00000540756 THEGLP0DJG4 465 aa23.7■■□□□ 1.38
TTC3-225ENST00000540756 DPP6P42658 865 aa23.7■■□□□ 1.38
TTC3-225ENST00000540756 WDR60Q8WVS4 1066 aa23.7■■□□□ 1.38
TTC3-225ENST00000540756 MRGBPQ9NV56 204 aa23.7■■□□□ 1.38
TTC3-225ENST00000540756 C1orf109Q9NX04 203 aa23.7■■□□□ 1.38
TTC3-225ENST00000540756 SNRNP200O75643 2136 aaKnown RBP23.69■■□□□ 1.38
TTC3-225ENST00000540756 H0YIV9 168 aa23.69■■□□□ 1.38
TTC3-225ENST00000540756 PI15O43692 258 aa23.69■■□□□ 1.38
TTC3-225ENST00000540756 ETHE1O95571 254 aa23.69■■□□□ 1.38
TTC3-225ENST00000540756 CELA2BP08218 269 aaPredicted RBP23.69■■□□□ 1.38
TTC3-225ENST00000540756 CDH1P12830 882 aa23.69■■□□□ 1.38
TTC3-225ENST00000540756 HNF4AP41235 474 aa23.69■■□□□ 1.38
TTC3-225ENST00000540756 CASP2P42575 452 aa23.69■■□□□ 1.38
TTC3-225ENST00000540756 EIF2B5Q13144 721 aaKnown RBP23.69■■□□□ 1.38
TTC3-225ENST00000540756 E2F2Q14209 437 aa23.69■■□□□ 1.38
TTC3-225ENST00000540756 SLBPQ14493 270 aaKnown RBP eCLIP23.69■■□□□ 1.38
TTC3-225ENST00000540756 KRT33BQ14525 404 aa23.69■■□□□ 1.38
TTC3-225ENST00000540756 SF1Q15637 639 aaKnown RBP23.69■■□□□ 1.38
TTC3-225ENST00000540756 MMEL1Q495T6 779 aa23.69■■□□□ 1.38
TTC3-225ENST00000540756 SCUBE1Q8IWY4 988 aa23.69■■□□□ 1.38
TTC3-225ENST00000540756 UBALD2Q8IYN6 164 aa23.69■■□□□ 1.38
TTC3-225ENST00000540756 OR7G3Q8NG95 312 aa23.69■■□□□ 1.38
TTC3-225ENST00000540756 VPS33AQ96AX1 596 aa23.69■■□□□ 1.38
TTC3-225ENST00000540756 SLC25A23Q9BV35 468 aa23.69■■□□□ 1.38
TTC3-225ENST00000540756 NOP53Q9NZM5 478 aaKnown RBP23.69■■□□□ 1.38
TTC3-225ENST00000540756 DMTF1Q9Y222 760 aa23.69■■□□□ 1.38
TTC3-225ENST00000540756 SIT1Q9Y3P8 196 aa23.69■■□□□ 1.38
TTC3-225ENST00000540756 HEATR5BQ9P2D3 2071 aa23.69■■□□□ 1.38
TTC3-225ENST00000540756 ANKRD28O15084 1053 aa23.69■■□□□ 1.38
TTC3-225ENST00000540756 NRP2O60462 931 aa23.69■■□□□ 1.38
TTC3-225ENST00000540756 SLC22A3O75751 556 aa23.69■■□□□ 1.38
TTC3-225ENST00000540756 MTHFD1P11586 935 aaKnown RBP23.69■■□□□ 1.38
TTC3-225ENST00000540756 PCNAP12004 261 aa23.69■■□□□ 1.38
TTC3-225ENST00000540756 TBL3Q12788 808 aaKnown RBP23.69■■□□□ 1.38
TTC3-225ENST00000540756 LRP8Q14114 963 aa23.69■■□□□ 1.38
TTC3-225ENST00000540756 PDCD4Q53EL6 469 aaKnown RBP23.69■■□□□ 1.38
TTC3-225ENST00000540756 BLOC1S3Q6QNY0 202 aa23.69■■□□□ 1.38
TTC3-225ENST00000540756 SFTPA2Q8IWL1 248 aa23.69■■□□□ 1.38
TTC3-225ENST00000540756 OR52E1Q8NGJ3 308 aa23.69■■□□□ 1.38
TTC3-225ENST00000540756 MRPL1Q9BYD6 325 aaKnown RBP23.69■■□□□ 1.38
TTC3-225ENST00000540756 AASDHPPTQ9NRN7 309 aa23.69■■□□□ 1.38
TTC3-225ENST00000540756 ZNF624Q9P2J8 865 aaPredicted RBP23.69■■□□□ 1.38
TTC3-225ENST00000540756 SLC7A8Q9UHI5 535 aa23.69■■□□□ 1.38
TTC3-225ENST00000540756 DLGAP4Q9Y2H0 992 aa23.69■■□□□ 1.38
TTC3-225ENST00000540756 MAGEB17A8MXT2 336 aa23.68■■□□□ 1.38
TTC3-225ENST00000540756 CFLARO15519 480 aa23.68■■□□□ 1.38
TTC3-225ENST00000540756 PDGFBP01127 241 aaPredicted RBP23.68■■□□□ 1.38
TTC3-225ENST00000540756 C1GALT1C1LP0DN25 315 aa23.68■■□□□ 1.38
TTC3-225ENST00000540756 ART3Q13508 389 aa23.68■■□□□ 1.38
TTC3-225ENST00000540756 FZD2Q14332 565 aa23.68■■□□□ 1.38
TTC3-225ENST00000540756 ARHGAP19Q14CB8 494 aa23.68■■□□□ 1.38
TTC3-225ENST00000540756 MAPRE2Q15555 327 aa23.68■■□□□ 1.38
TTC3-225ENST00000540756 ATG9BQ674R7 924 aa23.68■■□□□ 1.38
TTC3-225ENST00000540756 NXPE4Q6UWF7 544 aa23.68■■□□□ 1.38
TTC3-225ENST00000540756 ZFAND4Q86XD8 727 aa23.68■■□□□ 1.38
TTC3-225ENST00000540756 HUS1BQ8NHY5 278 aa23.68■■□□□ 1.38
TTC3-225ENST00000540756 CUEDC1Q9NWM3 386 aaPredicted RBP23.68■■□□□ 1.38
TTC3-225ENST00000540756 CEP192Q8TEP8 1941 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms