RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 GOLGA8MH3BSY2 632 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 ZNF185O15231 689 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 SLC16A5O15375 505 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 NIPSNAP2O75323 286 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 AVILO75366 819 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 KLF7O75840 302 aaPredicted RBP9.95□□□□□ -0.82
CDCA3-208ENST00000540683 CAPN1P07384 714 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 TPBGLP0DKB5 382 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 ERGP11308 486 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 ARNTP27540 789 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 PEBP1P30086 187 aaKnown RBP9.95□□□□□ -0.82
CDCA3-208ENST00000540683 MAGEA3P43357 314 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 CLCN7P51798 805 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 VSX2P58304 361 aaPredicted RBP9.95□□□□□ -0.82
CDCA3-208ENST00000540683 NFKB2Q00653 900 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 PRDX1Q06830 199 aaKnown RBP9.95□□□□□ -0.82
CDCA3-208ENST00000540683 GRB7Q14451 532 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 MYBPC3Q14896 1274 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 ZIC1Q15915 447 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 DCAF10Q5QP82 559 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 WASHC2DQ5SRD0 308 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 C1orf189Q5VU69 101 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 TTC27Q6P3X3 843 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 CES3Q6UWW8 571 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 CENPUQ71F23 418 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 RNF44Q7L0R7 432 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 REXO1L1PQ8IX06 675 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 MYO1HQ8N1T3 1032 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 SLC35F6Q8N357 371 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 GALNT16Q8N428 558 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 ZADH2Q8N4Q0 377 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 NAT8LQ8N9F0 302 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 GALNT11Q8NCW6 608 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 OR2A1Q8NGT9 310 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 LKAAEAR1Q8TD35 194 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 ATL1Q8WXF7 558 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 ASB11Q8WXH4 323 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 COL26A1Q96A83 441 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 THAP11Q96EK4 314 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 MS4A14Q96JA4 679 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 CABS1Q96KC9 395 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 CCDC138Q96M89 665 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 ZNF285Q96NJ3 590 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 MIPEPQ99797 713 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 PLCD4Q9BRC7 762 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 DPH7Q9BTV6 452 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 TRIM4Q9C037 500 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 ZNF304Q9HCX3 659 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 P4HTMQ9NXG6 502 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 DHCR7Q9UBM7 475 aaKnown RBP9.95□□□□□ -0.82
CDCA3-208ENST00000540683 CDC23Q9UJX2 597 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 SAR1BQ9Y6B6 198 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 SPTBP11277 2137 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 PCM1Q15154 2024 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 ZCWPW2A0A1B0GU75 182 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 TCRBV7S3A2A0A539 114 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 OR2A25A4D2G3 310 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 ARHGEF33A8MVX0 844 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 GOLGA8KD6RF30 607 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 GOLGA8TH3BQL2 631 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 GFYI3L273 518 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 HAX1O00165 279 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 DNALI1O14645 258 aaPredicted RBP9.94□□□□□ -0.82
CDCA3-208ENST00000540683 PRICKLE3O43900 615 aaPredicted RBP9.94□□□□□ -0.82
CDCA3-208ENST00000540683 SYF2O95926 243 aaKnown RBP9.94□□□□□ -0.82
CDCA3-208ENST00000540683 ICAM2P13598 275 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 CXCR2P25025 360 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 SLC1A2P43004 574 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 BDKRB1P46663 353 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 CD97P48960 835 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 AP1S2P56377 157 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 ARL4CP56559 192 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 RPS15AP62244 130 aaKnown RBP9.94□□□□□ -0.82
CDCA3-208ENST00000540683 DR1Q01658 176 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 TSTA3Q13630 321 aaPredicted RBP9.94□□□□□ -0.82
CDCA3-208ENST00000540683 ATP1A4Q13733 1029 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 CRYMQ14894 314 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 RBBP7Q16576 425 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 ACSBG2Q5FVE4 666 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 RNASEH2BQ5TBB1 312 aaKnown RBP9.94□□□□□ -0.82
CDCA3-208ENST00000540683 PRAMEF17Q5VTA0 474 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 AGAP7PQ5VUJ5 663 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 ICE2Q659A1 982 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 IGFL3Q6UXB1 125 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 UBE2R2Q712K3 238 aaPredicted RBP9.94□□□□□ -0.82
CDCA3-208ENST00000540683 TAX1BP1Q86VP1 789 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 IQCKQ8N0W5 287 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 C2orf73Q8N5S3 287 aaPredicted RBP9.94□□□□□ -0.82
CDCA3-208ENST00000540683 CPT1CQ8TCG5 803 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 MIEF2Q96C03 454 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 SIGLEC10Q96LC7 697 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 AGAP4Q96P64 663 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 IL17FQ96PD4 163 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 NAPGQ99747 312 aaPredicted RBP9.94□□□□□ -0.82
CDCA3-208ENST00000540683 HAUS8Q9BT25 410 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 PPANQ9NQ55 473 aaKnown RBP9.94□□□□□ -0.82
CDCA3-208ENST00000540683 CCDC177Q9NQR7 707 aaPredicted RBP9.94□□□□□ -0.82
CDCA3-208ENST00000540683 ZC3H7BQ9UGR2 993 aaKnown RBP9.94□□□□□ -0.82
CDCA3-208ENST00000540683 NEU2Q9Y3R4 380 aa9.94□□□□□ -0.82
CDCA3-208ENST00000540683 NFS1Q9Y697 457 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms