RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 PPP1R32Q7Z5V6 425 aa20.06■□□□□ 0.8
CHFR-217ENST00000540537 CLEC1AQ8NC01 280 aa20.06■□□□□ 0.8
CHFR-217ENST00000540537 INPP5DQ92835 1189 aa20.06■□□□□ 0.8
CHFR-217ENST00000540537 PKP4Q99569 1192 aa20.06■□□□□ 0.8
CHFR-217ENST00000540537 DPH7Q9BTV6 452 aa20.06■□□□□ 0.8
CHFR-217ENST00000540537 SLC6A20Q9NP91 592 aa20.06■□□□□ 0.8
CHFR-217ENST00000540537 ASIC3Q9UHC3 531 aa20.06■□□□□ 0.8
CHFR-217ENST00000540537 DOPEY2Q9Y3R5 2298 aa20.06■□□□□ 0.8
CHFR-217ENST00000540537 A0A0J9YVX5 310 aa20.05■□□□□ 0.8
CHFR-217ENST00000540537 DNALI1O14645 258 aaPredicted RBP20.05■□□□□ 0.8
CHFR-217ENST00000540537 NRP2O60462 931 aa20.05■□□□□ 0.8
CHFR-217ENST00000540537 KLHL41O60662 606 aa20.05■□□□□ 0.8
CHFR-217ENST00000540537 SORBS2O94875 1100 aaKnown RBP20.05■□□□□ 0.8
CHFR-217ENST00000540537 TCP1P17987 556 aaKnown RBP20.05■□□□□ 0.8
CHFR-217ENST00000540537 PGAM1P18669 254 aa20.05■□□□□ 0.8
CHFR-217ENST00000540537 PNLIPRP1P54315 467 aa20.05■□□□□ 0.8
CHFR-217ENST00000540537 FOXL2P58012 376 aa20.05■□□□□ 0.8
CHFR-217ENST00000540537 MPP1Q00013 466 aa20.05■□□□□ 0.8
CHFR-217ENST00000540537 CUL1Q13616 776 aa20.05■□□□□ 0.8
CHFR-217ENST00000540537 PTK6Q13882 451 aa20.05■□□□□ 0.8
CHFR-217ENST00000540537 VWA5B1Q5TIE3 1220 aa20.05■□□□□ 0.8
CHFR-217ENST00000540537 SUSD1Q6UWL2 747 aa20.05■□□□□ 0.8
CHFR-217ENST00000540537 COX15Q7KZN9 410 aa20.05■□□□□ 0.8
CHFR-217ENST00000540537 PCGF5Q86SE9 256 aa20.05■□□□□ 0.8
CHFR-217ENST00000540537 KCNMB4Q86W47 210 aa20.05■□□□□ 0.8
CHFR-217ENST00000540537 ATCAYQ86WG3 371 aa20.05■□□□□ 0.8
CHFR-217ENST00000540537 CD200R1Q8TD46 325 aa20.05■□□□□ 0.8
CHFR-217ENST00000540537 ASB11Q8WXH4 323 aa20.05■□□□□ 0.8
CHFR-217ENST00000540537 GPR21Q99679 349 aa20.05■□□□□ 0.8
CHFR-217ENST00000540537 ZFYVE21Q9BQ24 234 aa20.05■□□□□ 0.8
CHFR-217ENST00000540537 PLCD4Q9BRC7 762 aa20.05■□□□□ 0.8
CHFR-217ENST00000540537 ACAT2Q9BWD1 397 aa20.05■□□□□ 0.8
CHFR-217ENST00000540537 DDX47Q9H0S4 455 aaKnown RBP20.05■□□□□ 0.8
CHFR-217ENST00000540537 MRPS30Q9NP92 439 aaKnown RBP20.05■□□□□ 0.8
CHFR-217ENST00000540537 C5AR2Q9P296 337 aa20.05■□□□□ 0.8
CHFR-217ENST00000540537 PCYOX1Q9UHG3 505 aa20.05■□□□□ 0.8
CHFR-217ENST00000540537 NXT1Q9UKK6 140 aaKnown RBP20.05■□□□□ 0.8
CHFR-217ENST00000540537 COL12A1Q99715 3063 aa20.05■□□□□ 0.8
CHFR-217ENST00000540537 LRRK2Q5S007 2527 aa20.05■□□□□ 0.8
CHFR-217ENST00000540537 MDC1Q14676 2089 aaKnown RBP20.04■□□□□ 0.8
CHFR-217ENST00000540537 LOC105369274A0A096LPK9 316 aa20.04■□□□□ 0.8
CHFR-217ENST00000540537 LOC102723532A0A0G2JNH3 316 aa20.04■□□□□ 0.8
CHFR-217ENST00000540537 HYKKA2RU49 373 aa20.04■□□□□ 0.8
CHFR-217ENST00000540537 TTLL8A6PVC2 850 aa20.04■□□□□ 0.8
CHFR-217ENST00000540537 EIF3FO00303 357 aaPredicted RBP20.04■□□□□ 0.8
CHFR-217ENST00000540537 HAUS5O94927 633 aa20.04■□□□□ 0.8
CHFR-217ENST00000540537 CCNDBP1O95273 360 aa20.04■□□□□ 0.8
CHFR-217ENST00000540537 TTC4O95801 387 aa20.04■□□□□ 0.8
CHFR-217ENST00000540537 SLC16A8O95907 504 aa20.04■□□□□ 0.8
CHFR-217ENST00000540537 MMP11P24347 488 aa20.04■□□□□ 0.8
CHFR-217ENST00000540537 YBX1P67809 324 aaKnown RBP20.04■□□□□ 0.8
CHFR-217ENST00000540537 CRYMQ14894 314 aa20.04■□□□□ 0.8
CHFR-217ENST00000540537 NKG7Q16617 165 aa20.04■□□□□ 0.8
CHFR-217ENST00000540537 HSP90AA5PQ58FG0 334 aa20.04■□□□□ 0.8
CHFR-217ENST00000540537 CYHR1Q6ZMK1 362 aa20.04■□□□□ 0.8
CHFR-217ENST00000540537 OR4N4Q8N0Y3 316 aa20.04■□□□□ 0.8
CHFR-217ENST00000540537 GALNT16Q8N428 558 aa20.04■□□□□ 0.8
CHFR-217ENST00000540537 GABPB2Q8TAK5 448 aaPredicted RBP20.04■□□□□ 0.8
CHFR-217ENST00000540537 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.04■□□□□ 0.8
CHFR-217ENST00000540537 SPSB2Q99619 263 aa20.04■□□□□ 0.8
CHFR-217ENST00000540537 AARSD1Q9BTE6 412 aaKnown RBP20.04■□□□□ 0.8
CHFR-217ENST00000540537 IARS2Q9NSE4 1012 aaKnown RBP20.04■□□□□ 0.8
CHFR-217ENST00000540537 GFYI3L273 518 aa20.03■□□□□ 0.8
CHFR-217ENST00000540537 AGPSO00116 658 aa20.03■□□□□ 0.8
CHFR-217ENST00000540537 VPS26AO75436 327 aa20.03■□□□□ 0.8
CHFR-217ENST00000540537 SKIV2L2P42285 1042 aaKnown RBP20.03■□□□□ 0.8
CHFR-217ENST00000540537 SOX8P57073 446 aa20.03■□□□□ 0.8
CHFR-217ENST00000540537 PRDX1Q06830 199 aaKnown RBP20.03■□□□□ 0.8
CHFR-217ENST00000540537 DHX9Q08211 1270 aaKnown RBP20.03■□□□□ 0.8
CHFR-217ENST00000540537 MYBPC3Q14896 1274 aa20.03■□□□□ 0.8
CHFR-217ENST00000540537 ICE2Q659A1 982 aa20.03■□□□□ 0.8
CHFR-217ENST00000540537 JMJD6Q6NYC1 403 aaPredicted RBP20.03■□□□□ 0.8
CHFR-217ENST00000540537 PRMT9Q6P2P2 845 aa20.03■□□□□ 0.8
CHFR-217ENST00000540537 FBXO42Q6P3S6 717 aa20.03■□□□□ 0.8
CHFR-217ENST00000540537 PAQR7Q86WK9 346 aa20.03■□□□□ 0.8
CHFR-217ENST00000540537 TMEM151BQ8IW70 566 aa20.03■□□□□ 0.8
CHFR-217ENST00000540537 RBMXL3Q8N7X1 1067 aaKnown RBP20.03■□□□□ 0.8
CHFR-217ENST00000540537 C2CD4AQ8NCU7 369 aaPredicted RBP20.03■□□□□ 0.8
CHFR-217ENST00000540537 CPT1CQ8TCG5 803 aa20.03■□□□□ 0.8
CHFR-217ENST00000540537 ZNF480Q8WV37 535 aa20.03■□□□□ 0.8
CHFR-217ENST00000540537 EBNA1BP2Q99848 306 aaKnown RBP20.03■□□□□ 0.8
CHFR-217ENST00000540537 NAT9Q9BTE0 207 aa20.03■□□□□ 0.8
CHFR-217ENST00000540537 UTP6Q9NYH9 597 aaKnown RBP20.03■□□□□ 0.8
CHFR-217ENST00000540537 CTSFQ9UBX1 484 aa20.03■□□□□ 0.8
CHFR-217ENST00000540537 ZC3H7BQ9UGR2 993 aaKnown RBP20.03■□□□□ 0.8
CHFR-217ENST00000540537 TAC3Q9UHF0 121 aa20.03■□□□□ 0.8
CHFR-217ENST00000540537 PRRC2CQ9Y520 2896 aaKnown RBP20.03■□□□□ 0.8
CHFR-217ENST00000540537 IGKV1-8A0A0C4DH67 115 aa20.02■□□□□ 0.8
CHFR-217ENST00000540537 E7ENX8 843 aa20.02■□□□□ 0.8
CHFR-217ENST00000540537 H0YGG7 62 aa20.02■□□□□ 0.8
CHFR-217ENST00000540537 ZBTB14O43829 449 aa20.02■□□□□ 0.8
CHFR-217ENST00000540537 ALPPP05187 535 aa20.02■□□□□ 0.8
CHFR-217ENST00000540537 EIF2S1P05198 315 aaKnown RBP20.02■□□□□ 0.8
CHFR-217ENST00000540537 ERVK-10P10266 1014 aa20.02■□□□□ 0.8
CHFR-217ENST00000540537 OR1D4P47884 311 aa20.02■□□□□ 0.8
CHFR-217ENST00000540537 EMP3P54852 163 aa20.02■□□□□ 0.8
CHFR-217ENST00000540537 ARF3P61204 181 aaPredicted RBP20.02■□□□□ 0.8
CHFR-217ENST00000540537 ABATP80404 500 aa20.02■□□□□ 0.8
CHFR-217ENST00000540537 TAP2Q03519 686 aa20.02■□□□□ 0.8
CHFR-217ENST00000540537 TSTA3Q13630 321 aaPredicted RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms