RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 PTSQ03393 145 aa12.7□□□□□ -0.38
DNMT1-203ENST00000540357 KLHL22Q53GT1 634 aa12.7□□□□□ -0.38
DNMT1-203ENST00000540357 MS4A13Q5J8X5 152 aa12.7□□□□□ -0.38
DNMT1-203ENST00000540357 GPRIN1Q7Z2K8 1008 aa12.7□□□□□ -0.38
DNMT1-203ENST00000540357 MRPS31Q92665 395 aaKnown RBP12.7□□□□□ -0.38
DNMT1-203ENST00000540357 TMEM246Q9BRR3 403 aa12.7□□□□□ -0.38
DNMT1-203ENST00000540357 C11orf16Q9NQ32 467 aa12.7□□□□□ -0.38
DNMT1-203ENST00000540357 SMPD4Q9NXE4 827 aa12.7□□□□□ -0.38
DNMT1-203ENST00000540357 MAP10Q9P2G4 905 aa12.7□□□□□ -0.38
DNMT1-203ENST00000540357 SLC27A5Q9Y2P5 690 aa12.7□□□□□ -0.38
DNMT1-203ENST00000540357 LOC730098B7Z3J9 87 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 PSKH1P11801 424 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 MYL9P24844 172 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 CD52P31358 61 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 PTGR1Q14914 329 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 PROX2Q3B8N5 592 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 PRAMEF19Q5SWL8 479 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 CDK20Q8IZL9 346 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 KLHL6Q8WZ60 621 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 KHSRPQ92945 711 aaKnown RBP eCLIP12.69□□□□□ -0.38
DNMT1-203ENST00000540357 UBXN10Q96LJ8 280 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 KCTD7Q96MP8 289 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 PCDHGB5Q9Y5G0 923 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 ATAD5Q96QE3 1844 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 FAM47E-STBD1D6RA91 191 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 ARVCFO00192 962 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 CPNE3O75131 537 aaKnown RBP12.69□□□□□ -0.38
DNMT1-203ENST00000540357 RPS17P08708 135 aaKnown RBP12.69□□□□□ -0.38
DNMT1-203ENST00000540357 SLC2A2P11168 524 aaPredicted RBP12.69□□□□□ -0.38
DNMT1-203ENST00000540357 ZNF24P17028 368 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 HTR1BP28222 390 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 HNMTP50135 292 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 PNLIPRP1P54315 467 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 PTPRCAPQ14761 206 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 ERAP2Q6P179 960 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 C16orf62Q7Z3J2 963 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 ZSWIM9Q86XI8 627 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 DCP2Q8IU60 420 aaKnown RBP12.69□□□□□ -0.38
DNMT1-203ENST00000540357 LRRC20Q8TCA0 184 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 ASZ1Q8WWH4 475 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 FUBP1Q96AE4 644 aaKnown RBP12.69□□□□□ -0.38
DNMT1-203ENST00000540357 SEC14L4Q9UDX3 406 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 A0A1B0GTW7 788 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 A0A1B0GVM2 712 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 C1QAP02745 245 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 NKX2-5P52952 324 aaPredicted RBP12.69□□□□□ -0.38
DNMT1-203ENST00000540357 EPHB3P54753 998 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 KRT78Q8N1N4 520 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 GEMIN6Q8WXD5 167 aaKnown RBP12.69□□□□□ -0.38
DNMT1-203ENST00000540357 UFD1Q92890 307 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 NACC2Q96BF6 587 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 RIMKLBQ9ULI2 386 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 SCML2Q9UQR0 700 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 CKMP06732 381 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 TCEA1P23193 301 aaKnown RBP12.69□□□□□ -0.38
DNMT1-203ENST00000540357 NSG1P42857 185 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 OXA1LQ15070 435 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 C14orf80Q86SX3 495 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 TRIB3Q96RU7 358 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 SMURF1Q9HCE7 757 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 PCDHGB6Q9Y5F9 930 aa12.69□□□□□ -0.38
DNMT1-203ENST00000540357 SULT1C4O75897 302 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 GSRP00390 522 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 CBSLP0DN79 551 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 CBSP35520 551 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 ST3GAL4Q11206 333 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 SCARB2Q14108 478 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 KDELC1Q6UW63 502 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 DNAJB7Q7Z6W7 309 aaPredicted RBP12.68□□□□□ -0.38
DNMT1-203ENST00000540357 OXR1Q8N573 874 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 TRPV1Q8NER1 839 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 CYP2S1Q96SQ9 504 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 NSUN3Q9H649 340 aaKnown RBP12.68□□□□□ -0.38
DNMT1-203ENST00000540357 DHRS7Q9Y394 339 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 TRIM64CA6NLI5 447 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 TLR4O00206 839 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 NDUFB5O43674 189 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 IL7P13232 177 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 ACVRL1P37023 503 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 ABRAXAS2Q15018 415 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 SNAPC1Q16533 368 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 VMACQ2NL98 169 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 HKDC1Q2TB90 917 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 WSCD2Q2TBF2 565 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.68□□□□□ -0.38
DNMT1-203ENST00000540357 ZNF467Q7Z7K2 595 aaPredicted RBP12.68□□□□□ -0.38
DNMT1-203ENST00000540357 VMP1Q96GC9 406 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 SPATA9Q9BWV2 254 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 ARNT2Q9HBZ2 717 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 PAK6Q9NQU5 681 aaPredicted RBP12.68□□□□□ -0.38
DNMT1-203ENST00000540357 SEMA3GQ9NS98 782 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 DCAF13Q9NV06 445 aaKnown RBP12.68□□□□□ -0.38
DNMT1-203ENST00000540357 MAP4K5Q9Y4K4 846 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 CLDN24A6NM45 220 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 SOBPA7XYQ1 873 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 SRPRAP08240 638 aaKnown RBP12.68□□□□□ -0.38
DNMT1-203ENST00000540357 NR2F1P10589 423 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 GGT5P36269 586 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 CLCN4P51793 760 aa12.68□□□□□ -0.38
DNMT1-203ENST00000540357 GPR33Q49SQ1 333 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms