RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 FABP12A6NFH5 140 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 SAP18O00422 153 aaKnown RBP6.33□□□□□ -1.4
LSAMP-207ENST00000539563 TPST2O60704 377 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 KLK1P06870 262 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 CXCR1P25024 350 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 VLDLRP98155 873 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 TIGD6Q17RP2 521 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 SYPL2Q5VXT5 272 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 ZNF776Q68DI1 518 aaPredicted RBP6.33□□□□□ -1.4
LSAMP-207ENST00000539563 THOC6Q86W42 341 aaKnown RBP6.33□□□□□ -1.4
LSAMP-207ENST00000539563 KLK6Q92876 244 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 C1orf74Q96LT6 269 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 HBEGFQ99075 208 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 RNF121Q9H920 327 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 ABCB9Q9NP78 766 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 WRAP73Q9P2S5 460 aaPredicted RBP6.33□□□□□ -1.4
LSAMP-207ENST00000539563 CIDEBQ9UHD4 219 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 PHF24Q9UPV7 400 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 TELO2Q9Y4R8 837 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 PCDHGB2Q9Y5G2 931 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 COL1A1P02452 1464 aaPredicted RBP6.33□□□□□ -1.4
LSAMP-207ENST00000539563 LCHNA4D1U4 455 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 VSTM5A8MXK1 200 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 CCL22O00626 93 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 ENTPD6O75354 484 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 RCBTB2O95199 551 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 CHRNA1P02708 482 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 EBLN1P0CF75 366 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 NR2C1P13056 603 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 ZNF12P17014 697 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 ARF5P84085 180 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 SP140Q13342 867 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 ZNF792Q3KQV3 632 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 CRTC2Q53ET0 693 aaPredicted RBP6.33□□□□□ -1.4
LSAMP-207ENST00000539563 PLEKHS1Q5SXH7 462 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 SLC9A4Q6AI14 798 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 OLFML1Q6UWY5 402 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 GKN2Q86XP6 184 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 KAT2AQ92830 837 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 CEP295NLQ96MC4 621 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 ERMAPQ96PL5 475 aaPredicted RBP6.33□□□□□ -1.4
LSAMP-207ENST00000539563 TRIB3Q96RU7 358 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 CERS4Q9HA82 394 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 B3GAT2Q9NPZ5 323 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 PIGVQ9NUD9 493 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 LYARQ9NX58 379 aaKnown RBP6.33□□□□□ -1.4
LSAMP-207ENST00000539563 TVP23BQ9NYZ1 205 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 PTTG2Q9NZH5 202 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 ACTR3BQ9P1U1 418 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 HS3ST4Q9Y661 456 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 LRRC37A3O60309 1634 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 NEMP2A6NFY4 417 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 AGPSO00116 658 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 FZD9O00144 591 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 ZNF432O94892 652 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 YAP1P46937 504 aaKnown RBP6.33□□□□□ -1.4
LSAMP-207ENST00000539563 GALNT2Q10471 571 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 RNASE12Q5GAN4 147 aaKnown RBP6.33□□□□□ -1.4
LSAMP-207ENST00000539563 SLC8B1Q6J4K2 584 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 TMCO2Q7Z6W1 182 aaPredicted RBP6.33□□□□□ -1.4
LSAMP-207ENST00000539563 SLC51AQ86UW1 340 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 RASGRP3Q8IV61 690 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 FANCFQ9NPI8 374 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 TUBA8Q9NY65 449 aaPredicted RBP6.33□□□□□ -1.4
LSAMP-207ENST00000539563 METTL21EPA6NDL7 271 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 NDUFS4O43181 175 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 PEX2P28328 305 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 CHRNA4P43681 627 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 BTN3A2P78410 334 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 LYSMD3Q7Z3D4 306 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 GALNTL5Q7Z4T8 443 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 CAND1Q86VP6 1230 aaKnown RBP6.32□□□□□ -1.4
LSAMP-207ENST00000539563 IQCF2Q8IXL9 164 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 OR9A1PQ8NGU1 263 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 SETD6Q8TBK2 473 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 CCDC107Q8WV48 283 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 TP53INP1Q96A56 240 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 MNTQ99583 582 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 POLR2J2Q9GZM3 115 aaKnown RBP6.32□□□□□ -1.4
LSAMP-207ENST00000539563 POLR2J3Q9H1A7 115 aaKnown RBP6.32□□□□□ -1.4
LSAMP-207ENST00000539563 C12orf65Q9H3J6 166 aaKnown RBP6.32□□□□□ -1.4
LSAMP-207ENST00000539563 FAM120CQ9NX05 1096 aaKnown RBP6.32□□□□□ -1.4
LSAMP-207ENST00000539563 ACSL5Q9ULC5 683 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 SPIN1Q9Y657 262 aaPredicted RBP6.32□□□□□ -1.4
LSAMP-207ENST00000539563 PHRF1Q9P1Y6 1649 aaKnown RBP6.32□□□□□ -1.4
LSAMP-207ENST00000539563 SNED1Q8TER0 1413 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 UGT1A9O60656 530 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 RAB36O95755 333 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 EPOP01588 193 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 H1F0P07305 194 aaKnown RBP6.32□□□□□ -1.4
LSAMP-207ENST00000539563 AHCYP23526 432 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 IL1R2P27930 398 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 HSD11B1P28845 292 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 ABATP80404 500 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 KHDC1Q4VXA5 237 aaKnown RBP6.32□□□□□ -1.4
LSAMP-207ENST00000539563 C10orf62Q5T681 223 aaPredicted RBP6.32□□□□□ -1.4
LSAMP-207ENST00000539563 PRPF38BQ5VTL8 546 aaKnown RBP6.32□□□□□ -1.4
LSAMP-207ENST00000539563 PGBD2Q6P3X8 592 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 SMARCD3Q6STE5 483 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 MMAAQ8IVH4 418 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms