RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 RBMXL3Q8N7X1 1067 aaKnown RBP21.24■□□□□ 0.99
SCARB1-206ENST00000539320 CALML6Q8TD86 181 aa21.24■□□□□ 0.99
SCARB1-206ENST00000539320 ZDHHC19Q8WVZ1 309 aaPredicted RBP21.24■□□□□ 0.99
SCARB1-206ENST00000539320 KCNJ9Q92806 393 aa21.24■□□□□ 0.99
SCARB1-206ENST00000539320 SPSB2Q99619 263 aa21.24■□□□□ 0.99
SCARB1-206ENST00000539320 DPH7Q9BTV6 452 aa21.24■□□□□ 0.99
SCARB1-206ENST00000539320 MFRPQ9BY79 579 aa21.24■□□□□ 0.99
SCARB1-206ENST00000539320 SLC6A20Q9NP91 592 aa21.24■□□□□ 0.99
SCARB1-206ENST00000539320 C20orf96Q9NUD7 363 aaPredicted RBP21.24■□□□□ 0.99
SCARB1-206ENST00000539320 LUZP4Q9P127 313 aa21.24■□□□□ 0.99
SCARB1-206ENST00000539320 KLHL42Q9P2K6 505 aa21.24■□□□□ 0.99
SCARB1-206ENST00000539320 ANKMY1Q9P2S6 941 aa21.24■□□□□ 0.99
SCARB1-206ENST00000539320 CTSFQ9UBX1 484 aa21.24■□□□□ 0.99
SCARB1-206ENST00000539320 NXT1Q9UKK6 140 aaKnown RBP21.24■□□□□ 0.99
SCARB1-206ENST00000539320 MED16Q9Y2X0 877 aa21.24■□□□□ 0.99
SCARB1-206ENST00000539320 NUP210LQ5VU65 1888 aa21.24■□□□□ 0.99
SCARB1-206ENST00000539320 ZNF839A8K0R7 811 aa21.23■□□□□ 0.99
SCARB1-206ENST00000539320 VPS4BO75351 444 aa21.23■□□□□ 0.99
SCARB1-206ENST00000539320 ALPPP05187 535 aa21.23■□□□□ 0.99
SCARB1-206ENST00000539320 MMP11P24347 488 aa21.23■□□□□ 0.99
SCARB1-206ENST00000539320 RPA3P35244 121 aaPredicted RBP21.23■□□□□ 0.99
SCARB1-206ENST00000539320 HSD17B2P37059 387 aa21.23■□□□□ 0.99
SCARB1-206ENST00000539320 TSTA3Q13630 321 aaPredicted RBP21.23■□□□□ 0.99
SCARB1-206ENST00000539320 NKG7Q16617 165 aa21.23■□□□□ 0.99
SCARB1-206ENST00000539320 SUSD1Q6UWL2 747 aa21.23■□□□□ 0.99
SCARB1-206ENST00000539320 PPIL6Q8IXY8 311 aa21.23■□□□□ 0.99
SCARB1-206ENST00000539320 FAM26EQ8N5C1 309 aa21.23■□□□□ 0.99
SCARB1-206ENST00000539320 GALNT11Q8NCW6 608 aa21.23■□□□□ 0.99
SCARB1-206ENST00000539320 PNPLA2Q96AD5 504 aa21.23■□□□□ 0.99
SCARB1-206ENST00000539320 NACC2Q96BF6 587 aa21.23■□□□□ 0.99
SCARB1-206ENST00000539320 PKP4Q99569 1192 aa21.23■□□□□ 0.99
SCARB1-206ENST00000539320 ZFYVE21Q9BQ24 234 aa21.23■□□□□ 0.99
SCARB1-206ENST00000539320 MRPS30Q9NP92 439 aaKnown RBP21.23■□□□□ 0.99
SCARB1-206ENST00000539320 SLAMF7Q9NQ25 335 aa21.23■□□□□ 0.99
SCARB1-206ENST00000539320 CDC23Q9UJX2 597 aa21.23■□□□□ 0.99
SCARB1-206ENST00000539320 VPS4AQ9UN37 437 aa21.23■□□□□ 0.99
SCARB1-206ENST00000539320 MAP4K5Q9Y4K4 846 aa21.23■□□□□ 0.99
SCARB1-206ENST00000539320 NAV2Q8IVL1 2488 aa21.23■□□□□ 0.99
SCARB1-206ENST00000539320 MAST4O15021 2626 aa21.23■□□□□ 0.99
SCARB1-206ENST00000539320 HEATR5BQ9P2D3 2071 aa21.22■□□□□ 0.99
SCARB1-206ENST00000539320 LOC105369274A0A096LPK9 316 aa21.22■□□□□ 0.99
SCARB1-206ENST00000539320 LOC102723532A0A0G2JNH3 316 aa21.22■□□□□ 0.99
SCARB1-206ENST00000539320 AGPSO00116 658 aa21.22■□□□□ 0.99
SCARB1-206ENST00000539320 ZSCAN12O43309 604 aa21.22■□□□□ 0.99
SCARB1-206ENST00000539320 CCNDBP1O95273 360 aa21.22■□□□□ 0.99
SCARB1-206ENST00000539320 MPC1LP0DKB6 136 aa21.22■□□□□ 0.99
SCARB1-206ENST00000539320 ERVK-10P10266 1014 aa21.22■□□□□ 0.99
SCARB1-206ENST00000539320 ENO3P13929 434 aaPredicted RBP21.22■□□□□ 0.99
SCARB1-206ENST00000539320 OR1D4P47884 311 aa21.22■□□□□ 0.99
SCARB1-206ENST00000539320 PNLIPRP1P54315 467 aa21.22■□□□□ 0.99
SCARB1-206ENST00000539320 YBX1P67809 324 aaKnown RBP21.22■□□□□ 0.99
SCARB1-206ENST00000539320 CUL1Q13616 776 aa21.22■□□□□ 0.99
SCARB1-206ENST00000539320 ZNF549Q6P9A3 640 aa21.22■□□□□ 0.99
SCARB1-206ENST00000539320 OR4N4Q8N0Y3 316 aa21.22■□□□□ 0.99
SCARB1-206ENST00000539320 DTWD1Q8N5C7 304 aa21.22■□□□□ 0.99
SCARB1-206ENST00000539320 Q8NA96 180 aa21.22■□□□□ 0.99
SCARB1-206ENST00000539320 FBXO15Q8NCQ5 510 aaPredicted RBP21.22■□□□□ 0.99
SCARB1-206ENST00000539320 SIGLEC10Q96LC7 697 aa21.22■□□□□ 0.99
SCARB1-206ENST00000539320 FAM167BQ9BTA0 163 aa21.22■□□□□ 0.99
SCARB1-206ENST00000539320 TAC3Q9UHF0 121 aa21.22■□□□□ 0.99
SCARB1-206ENST00000539320 FBXL4Q9UKA2 621 aa21.22■□□□□ 0.99
SCARB1-206ENST00000539320 SNX12Q9UMY4 172 aa21.22■□□□□ 0.99
SCARB1-206ENST00000539320 COMMD10Q9Y6G5 202 aa21.22■□□□□ 0.99
SCARB1-206ENST00000539320 CNTRLQ7Z7A1 2325 aa21.22■□□□□ 0.99
SCARB1-206ENST00000539320 ESPL1Q14674 2120 aa21.22■□□□□ 0.99
SCARB1-206ENST00000539320 HYKKA2RU49 373 aa21.21■□□□□ 0.99
SCARB1-206ENST00000539320 MASP2O00187 686 aa21.21■□□□□ 0.99
SCARB1-206ENST00000539320 CES2O00748 559 aa21.21■□□□□ 0.99
SCARB1-206ENST00000539320 VPS26AO75436 327 aa21.21■□□□□ 0.99
SCARB1-206ENST00000539320 MED26O95402 600 aa21.21■□□□□ 0.99
SCARB1-206ENST00000539320 EIF2S1P05198 315 aaKnown RBP21.21■□□□□ 0.99
SCARB1-206ENST00000539320 UQCRFS1P47985 274 aa21.21■□□□□ 0.99
SCARB1-206ENST00000539320 MPP1Q00013 466 aa21.21■□□□□ 0.99
SCARB1-206ENST00000539320 SRSF1Q07955 248 aaKnown RBP eCLIP21.21■□□□□ 0.99
SCARB1-206ENST00000539320 PPP1R7Q15435 360 aa21.21■□□□□ 0.99
SCARB1-206ENST00000539320 INPP5JQ15735 1006 aaPredicted RBP21.21■□□□□ 0.99
SCARB1-206ENST00000539320 PRR30Q53SZ7 412 aaPredicted RBP21.21■□□□□ 0.99
SCARB1-206ENST00000539320 RNASEH2BQ5TBB1 312 aaKnown RBP21.21■□□□□ 0.99
SCARB1-206ENST00000539320 PRMT9Q6P2P2 845 aa21.21■□□□□ 0.99
SCARB1-206ENST00000539320 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.21■□□□□ 0.99
SCARB1-206ENST00000539320 CD200R1Q8TD46 325 aa21.21■□□□□ 0.99
SCARB1-206ENST00000539320 C10orf90Q96M02 699 aa21.21■□□□□ 0.99
SCARB1-206ENST00000539320 GPR21Q99679 349 aa21.21■□□□□ 0.99
SCARB1-206ENST00000539320 PLCD4Q9BRC7 762 aa21.21■□□□□ 0.99
SCARB1-206ENST00000539320 SOX17Q9H6I2 414 aaPredicted RBP21.21■□□□□ 0.99
SCARB1-206ENST00000539320 ZNF552Q9H707 407 aaPredicted RBP21.21■□□□□ 0.99
SCARB1-206ENST00000539320 ATP13A2Q9NQ11 1180 aa21.21■□□□□ 0.99
SCARB1-206ENST00000539320 ZC3H7BQ9UGR2 993 aaKnown RBP21.21■□□□□ 0.99
SCARB1-206ENST00000539320 FBXO5Q9UKT4 447 aa21.21■□□□□ 0.99
SCARB1-206ENST00000539320 MAU2Q9Y6X3 613 aa21.21■□□□□ 0.99
SCARB1-206ENST00000539320 IPO13O94829 963 aaKnown RBP21.2■□□□□ 0.98
SCARB1-206ENST00000539320 SLC16A8O95907 504 aa21.2■□□□□ 0.98
SCARB1-206ENST00000539320 PGAM1P18669 254 aa21.2■□□□□ 0.98
SCARB1-206ENST00000539320 SOX8P57073 446 aa21.2■□□□□ 0.98
SCARB1-206ENST00000539320 AIMP2Q13155 320 aaKnown RBP21.2■□□□□ 0.98
SCARB1-206ENST00000539320 MUM1Q2TAK8 710 aa21.2■□□□□ 0.98
SCARB1-206ENST00000539320 PRTGQ2VWP7 1150 aa21.2■□□□□ 0.98
SCARB1-206ENST00000539320 ICE2Q659A1 982 aa21.2■□□□□ 0.98
SCARB1-206ENST00000539320 SHISA6Q6ZSJ9 500 aa21.2■□□□□ 0.98
SCARB1-206ENST00000539320 KCNMB4Q86W47 210 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms