RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 HMOX2P30519 316 aa13.67□□□□□ -0.22
CD4-208ENST00000538827 PKNOX1P55347 436 aa13.67□□□□□ -0.22
CD4-208ENST00000538827 TAP2Q03519 686 aa13.67□□□□□ -0.22
CD4-208ENST00000538827 TRAF3Q13114 568 aa13.67□□□□□ -0.22
CD4-208ENST00000538827 PDCD2Q16342 344 aaPredicted RBP13.67□□□□□ -0.22
CD4-208ENST00000538827 C14orf28Q4W4Y0 310 aa13.67□□□□□ -0.22
CD4-208ENST00000538827 CLEC6AQ6EIG7 209 aa13.67□□□□□ -0.22
CD4-208ENST00000538827 CGB2Q6NT52 195 aa13.67□□□□□ -0.22
CD4-208ENST00000538827 METTL2BQ6P1Q9 378 aaKnown RBP13.67□□□□□ -0.22
CD4-208ENST00000538827 SPATA21Q7Z572 469 aa13.67□□□□□ -0.22
CD4-208ENST00000538827 AMIGO1Q86WK6 493 aa13.67□□□□□ -0.22
CD4-208ENST00000538827 ARL14Q8N4G2 192 aa13.67□□□□□ -0.22
CD4-208ENST00000538827 LINC01555Q8NAE3 123 aa13.67□□□□□ -0.22
CD4-208ENST00000538827 OR4F6Q8NGB9 312 aa13.67□□□□□ -0.22
CD4-208ENST00000538827 RFWD2Q8NHY2 731 aa13.67□□□□□ -0.22
CD4-208ENST00000538827 KCNA7Q96RP8 456 aa13.67□□□□□ -0.22
CD4-208ENST00000538827 MENTQ9BUN1 341 aa13.67□□□□□ -0.22
CD4-208ENST00000538827 SGPP1Q9BX95 441 aa13.67□□□□□ -0.22
CD4-208ENST00000538827 TRIM55Q9BYV6 548 aa13.67□□□□□ -0.22
CD4-208ENST00000538827 ACTR8Q9H981 624 aa13.67□□□□□ -0.22
CD4-208ENST00000538827 TNFRSF12AQ9NP84 129 aa13.67□□□□□ -0.22
CD4-208ENST00000538827 INTS7Q9NVH2 962 aaKnown RBP13.67□□□□□ -0.22
CD4-208ENST00000538827 PSD3Q9NYI0 1048 aa13.67□□□□□ -0.22
CD4-208ENST00000538827 ZDHHC2Q9UIJ5 367 aa13.67□□□□□ -0.22
CD4-208ENST00000538827 DCTN4Q9UJW0 460 aa13.67□□□□□ -0.22
CD4-208ENST00000538827 PCM1Q15154 2024 aa13.67□□□□□ -0.22
CD4-208ENST00000538827 GSAPA4D1B5 854 aa13.66□□□□□ -0.22
CD4-208ENST00000538827 ISM1B1AKI9 464 aa13.66□□□□□ -0.22
CD4-208ENST00000538827 NDUFAB1O14561 156 aa13.66□□□□□ -0.22
CD4-208ENST00000538827 AZIN1O14977 448 aa13.66□□□□□ -0.22
CD4-208ENST00000538827 DFNA5O60443 496 aa13.66□□□□□ -0.22
CD4-208ENST00000538827 ESRRBO95718 433 aa13.66□□□□□ -0.22
CD4-208ENST00000538827 PRDX3P30048 256 aaKnown RBP13.66□□□□□ -0.22
CD4-208ENST00000538827 RPL14P50914 215 aaKnown RBP13.66□□□□□ -0.22
CD4-208ENST00000538827 SH3BP2P78314 561 aa13.66□□□□□ -0.22
CD4-208ENST00000538827 IRF8Q02556 426 aa13.66□□□□□ -0.22
CD4-208ENST00000538827 CHIT1Q13231 466 aa13.66□□□□□ -0.22
CD4-208ENST00000538827 XKR6Q5GH73 641 aa13.66□□□□□ -0.22
CD4-208ENST00000538827 LETMD1Q6P1Q0 360 aa13.66□□□□□ -0.22
CD4-208ENST00000538827 LCTLQ6UWM7 567 aa13.66□□□□□ -0.22
CD4-208ENST00000538827 TMEM26Q6ZUK4 368 aa13.66□□□□□ -0.22
CD4-208ENST00000538827 MILR1Q7Z6M3 343 aa13.66□□□□□ -0.22
CD4-208ENST00000538827 WDR75Q8IWA0 830 aaKnown RBP13.66□□□□□ -0.22
CD4-208ENST00000538827 RBM12BQ8IXT5 1001 aaKnown RBP13.66□□□□□ -0.22
CD4-208ENST00000538827 LRRC56Q8IYG6 542 aaPredicted RBP13.66□□□□□ -0.22
CD4-208ENST00000538827 SLC25A45Q8N413 288 aa13.66□□□□□ -0.22
CD4-208ENST00000538827 MINDY1Q8N5J2 469 aa13.66□□□□□ -0.22
CD4-208ENST00000538827 ARL10Q8N8L6 244 aa13.66□□□□□ -0.22
CD4-208ENST00000538827 CDYL2Q8N8U2 506 aa13.66□□□□□ -0.22
CD4-208ENST00000538827 PIWIL2Q8TC59 973 aaKnown RBP13.66□□□□□ -0.22
CD4-208ENST00000538827 BCAS4Q8TDM0 211 aa13.66□□□□□ -0.22
CD4-208ENST00000538827 ZNF473Q8WTR7 871 aaKnown RBP13.66□□□□□ -0.22
CD4-208ENST00000538827 SLC5A11Q8WWX8 675 aa13.66□□□□□ -0.22
CD4-208ENST00000538827 PPP1R36Q96LQ0 422 aa13.66□□□□□ -0.22
CD4-208ENST00000538827 OR4K3Q96R72 315 aa13.66□□□□□ -0.22
CD4-208ENST00000538827 CCT8L2Q96SF2 557 aa13.66□□□□□ -0.22
CD4-208ENST00000538827 MIPEPQ99797 713 aa13.66□□□□□ -0.22
CD4-208ENST00000538827 HAUS8Q9BT25 410 aa13.66□□□□□ -0.22
CD4-208ENST00000538827 TBC1D10AQ9BXI6 508 aa13.66□□□□□ -0.22
CD4-208ENST00000538827 SLC40A1Q9NP59 571 aa13.66□□□□□ -0.22
CD4-208ENST00000538827 SH2B3Q9UQQ2 575 aa13.66□□□□□ -0.22
CD4-208ENST00000538827 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.66□□□□□ -0.22
CD4-208ENST00000538827 USH1CQ9Y6N9 552 aa13.66□□□□□ -0.22
CD4-208ENST00000538827 A0A1B0GTL3 188 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 OR6C74A6NCV1 312 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 RHPN2P1A8MT19 583 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 C1QTNF9BB2RNN3 333 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 FFAR3O14843 346 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 GPR42O15529 346 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 SNRNP200O75643 2136 aaKnown RBP13.65□□□□□ -0.22
CD4-208ENST00000538827 CCNDBP1O95273 360 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 FAM107AO95990 144 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 ENO1P06733 434 aaKnown RBP13.65□□□□□ -0.22
CD4-208ENST00000538827 CHRM5P08912 532 aaPredicted RBP13.65□□□□□ -0.22
CD4-208ENST00000538827 C1QTNF9P0C862 333 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 CDH1P12830 882 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 HGFP14210 728 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 EPORP19235 508 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 POLR2CP19387 275 aaPredicted RBP13.65□□□□□ -0.22
CD4-208ENST00000538827 FOXA1P55317 472 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 ERVPABLB-1P60509 514 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 GALNT1Q10472 559 aaPredicted RBP13.65□□□□□ -0.22
CD4-208ENST00000538827 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.65□□□□□ -0.22
CD4-208ENST00000538827 KANK2Q63ZY3 851 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 ARMC6Q6NXE6 501 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 ADCK2Q7Z695 626 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 C17orf64Q86WR6 236 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 OOSP2Q86WS3 158 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 SLC35F3Q8IY50 421 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 KIRREL3Q8IZU9 778 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 SAP25Q8TEE9 199 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 NEIL2Q969S2 332 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 GRAMD1AQ96CP6 724 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 PRR11Q96HE9 360 aaPredicted RBP13.65□□□□□ -0.22
CD4-208ENST00000538827 FAR2Q96K12 515 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 SLC38A3Q99624 504 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 PCBD2Q9H0N5 130 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 SPHK1Q9NYA1 384 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 NLGN3Q9NZ94 848 aa13.65□□□□□ -0.22
CD4-208ENST00000538827 GPRC5BQ9NZH0 403 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms