RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 SULT1C3Q6IMI6 304 aa16.65■□□□□ 0.26
CLN6-202ENST00000538696 TRPM8Q7Z2W7 1104 aa16.65■□□□□ 0.26
CLN6-202ENST00000538696 AMIGO1Q86WK6 493 aa16.65■□□□□ 0.26
CLN6-202ENST00000538696 OR4E2Q8NGC2 313 aa16.65■□□□□ 0.26
CLN6-202ENST00000538696 OR2L8Q8NGY9 312 aa16.65■□□□□ 0.26
CLN6-202ENST00000538696 RSC1A1Q92681 617 aa16.65■□□□□ 0.26
CLN6-202ENST00000538696 FBXL8Q96CD0 374 aa16.65■□□□□ 0.26
CLN6-202ENST00000538696 CCDC138Q96M89 665 aa16.65■□□□□ 0.26
CLN6-202ENST00000538696 CCDC3Q9BQI4 270 aa16.65■□□□□ 0.26
CLN6-202ENST00000538696 RAB11FIP5Q9BXF6 653 aa16.65■□□□□ 0.26
CLN6-202ENST00000538696 ZBTB26Q9HCK0 441 aa16.65■□□□□ 0.26
CLN6-202ENST00000538696 SEMA4BQ9NPR2 832 aaPredicted RBP16.65■□□□□ 0.26
CLN6-202ENST00000538696 STOX2Q9P2F5 926 aaPredicted RBP16.65■□□□□ 0.26
CLN6-202ENST00000538696 HEY2Q9UBP5 337 aa16.65■□□□□ 0.26
CLN6-202ENST00000538696 FIS1Q9Y3D6 152 aa16.65■□□□□ 0.26
CLN6-202ENST00000538696 IGHV1OR21-1A0A087WYE8 117 aa16.64■□□□□ 0.25
CLN6-202ENST00000538696 FAM221BA6H8Z2 402 aa16.64■□□□□ 0.25
CLN6-202ENST00000538696 PABPN1LA6NDY0 278 aaKnown RBP16.64■□□□□ 0.25
CLN6-202ENST00000538696 BTN3A3O00478 584 aa16.64■□□□□ 0.25
CLN6-202ENST00000538696 E2F3O00716 465 aa16.64■□□□□ 0.25
CLN6-202ENST00000538696 UBXN7O94888 489 aa16.64■□□□□ 0.25
CLN6-202ENST00000538696 SLC16A8O95907 504 aa16.64■□□□□ 0.25
CLN6-202ENST00000538696 ANXA5P08758 320 aa16.64■□□□□ 0.25
CLN6-202ENST00000538696 TYRP1P17643 537 aa16.64■□□□□ 0.25
CLN6-202ENST00000538696 CSRP1P21291 193 aaKnown RBP16.64■□□□□ 0.25
CLN6-202ENST00000538696 ALDH4A1P30038 563 aa16.64■□□□□ 0.25
CLN6-202ENST00000538696 PLA2G5P39877 138 aa16.64■□□□□ 0.25
CLN6-202ENST00000538696 HK2P52789 917 aa16.64■□□□□ 0.25
CLN6-202ENST00000538696 PNLIPRP1P54315 467 aa16.64■□□□□ 0.25
CLN6-202ENST00000538696 LCP2Q13094 533 aa16.64■□□□□ 0.25
CLN6-202ENST00000538696 TUBB3Q13509 450 aa16.64■□□□□ 0.25
CLN6-202ENST00000538696 FASTKQ14296 549 aaKnown RBP16.64■□□□□ 0.25
CLN6-202ENST00000538696 CYP2A13Q16696 494 aa16.64■□□□□ 0.25
CLN6-202ENST00000538696 ZXDCQ2QGD7 858 aaPredicted RBP16.64■□□□□ 0.25
CLN6-202ENST00000538696 GLRX5Q86SX6 157 aa16.64■□□□□ 0.25
CLN6-202ENST00000538696 ALYREFQ86V81 257 aaKnown RBP16.64■□□□□ 0.25
CLN6-202ENST00000538696 LINC01555Q8NAE3 123 aa16.64■□□□□ 0.25
CLN6-202ENST00000538696 AGAP11Q8TF27 550 aa16.64■□□□□ 0.25
CLN6-202ENST00000538696 ZNF480Q8WV37 535 aa16.64■□□□□ 0.25
CLN6-202ENST00000538696 FAM122AQ96E09 287 aa16.64■□□□□ 0.25
CLN6-202ENST00000538696 TWSG1Q9GZX9 223 aa16.64■□□□□ 0.25
CLN6-202ENST00000538696 SRMSQ9H3Y6 488 aa16.64■□□□□ 0.25
CLN6-202ENST00000538696 MID1IP1Q9NPA3 183 aa16.64■□□□□ 0.25
CLN6-202ENST00000538696 TOR4AQ9NXH8 423 aa16.64■□□□□ 0.25
CLN6-202ENST00000538696 TNPO3Q9Y5L0 923 aaKnown RBP16.64■□□□□ 0.25
CLN6-202ENST00000538696 CEP250Q9BV73 2442 aa16.63■□□□□ 0.25
CLN6-202ENST00000538696 A0A1B0GTL3 188 aa16.63■□□□□ 0.25
CLN6-202ENST00000538696 OR6C74A6NCV1 312 aa16.63■□□□□ 0.25
CLN6-202ENST00000538696 HDAC3O15379 428 aa16.63■□□□□ 0.25
CLN6-202ENST00000538696 DIAPH2O60879 1101 aa16.63■□□□□ 0.25
CLN6-202ENST00000538696 RPLP0P05388 317 aaKnown RBP16.63■□□□□ 0.25
CLN6-202ENST00000538696 JUNP05412 331 aaKnown RBP16.63■□□□□ 0.25
CLN6-202ENST00000538696 PROS1P07225 676 aa16.63■□□□□ 0.25
CLN6-202ENST00000538696 GP1BAP07359 652 aa16.63■□□□□ 0.25
CLN6-202ENST00000538696 PEBP1P30086 187 aaKnown RBP16.63■□□□□ 0.25
CLN6-202ENST00000538696 CSF2RBP32927 897 aa16.63■□□□□ 0.25
CLN6-202ENST00000538696 CAPZBP47756 277 aa16.63■□□□□ 0.25
CLN6-202ENST00000538696 NAA20P61599 178 aa16.63■□□□□ 0.25
CLN6-202ENST00000538696 SH3BP2P78314 561 aa16.63■□□□□ 0.25
CLN6-202ENST00000538696 DMTNQ08495 405 aa16.63■□□□□ 0.25
CLN6-202ENST00000538696 ARHGAP19Q14CB8 494 aa16.63■□□□□ 0.25
CLN6-202ENST00000538696 TRIP6Q15654 476 aaKnown RBP16.63■□□□□ 0.25
CLN6-202ENST00000538696 PDCD2Q16342 344 aaPredicted RBP16.63■□□□□ 0.25
CLN6-202ENST00000538696 RBBP7Q16576 425 aa16.63■□□□□ 0.25
CLN6-202ENST00000538696 SLC9B1Q4ZJI4 515 aa16.63■□□□□ 0.25
CLN6-202ENST00000538696 CDKL4Q5MAI5 379 aa16.63■□□□□ 0.25
CLN6-202ENST00000538696 NKAIN2Q5VXU1 208 aa16.63■□□□□ 0.25
CLN6-202ENST00000538696 EPGNQ6UW88 154 aa16.63■□□□□ 0.25
CLN6-202ENST00000538696 GOLGA7Q7Z5G4 137 aa16.63■□□□□ 0.25
CLN6-202ENST00000538696 SYVN1Q86TM6 617 aa16.63■□□□□ 0.25
CLN6-202ENST00000538696 OOSP2Q86WS3 158 aa16.63■□□□□ 0.25
CLN6-202ENST00000538696 LRRC56Q8IYG6 542 aaPredicted RBP16.63■□□□□ 0.25
CLN6-202ENST00000538696 ADGRF3Q8IZF5 1079 aa16.63■□□□□ 0.25
CLN6-202ENST00000538696 RAB42Q8N4Z0 105 aa16.63■□□□□ 0.25
CLN6-202ENST00000538696 C2orf73Q8N5S3 287 aaPredicted RBP16.63■□□□□ 0.25
CLN6-202ENST00000538696 FITM2Q8N6M3 262 aa16.63■□□□□ 0.25
CLN6-202ENST00000538696 PPFIBP2Q8ND30 876 aa16.63■□□□□ 0.25
CLN6-202ENST00000538696 OR10G6Q8NH81 332 aa16.63■□□□□ 0.25
CLN6-202ENST00000538696 HMGCLL1Q8TB92 370 aa16.63■□□□□ 0.25
CLN6-202ENST00000538696 CCT6BQ92526 530 aa16.63■□□□□ 0.25
CLN6-202ENST00000538696 PRR11Q96HE9 360 aaPredicted RBP16.63■□□□□ 0.25
CLN6-202ENST00000538696 MYLK2Q9H1R3 596 aa16.63■□□□□ 0.25
CLN6-202ENST00000538696 SLC32A1Q9H598 525 aa16.63■□□□□ 0.25
CLN6-202ENST00000538696 OR6C2Q9NZP2 312 aa16.63■□□□□ 0.25
CLN6-202ENST00000538696 CDV3Q9UKY7 258 aaKnown RBP16.63■□□□□ 0.25
CLN6-202ENST00000538696 TRAF6Q9Y4K3 522 aa16.63■□□□□ 0.25
CLN6-202ENST00000538696 A0A1W2PPV9 198 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 A0A1W2PQM1 296 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 OR5K3A6NET4 321 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 SLCO1B7G3V0H7 640 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 DUX1O43812 170 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 CCNT2O60583 730 aaKnown RBP16.62■□□□□ 0.25
CLN6-202ENST00000538696 SKAP2O75563 359 aaPredicted RBP16.62■□□□□ 0.25
CLN6-202ENST00000538696 RFPL3O75679 317 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 DCTN3O75935 186 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 CHRM5P08912 532 aaPredicted RBP16.62■□□□□ 0.25
CLN6-202ENST00000538696 AMD1P17707 334 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 CD1CP29017 333 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 SERPINB3P29508 390 aa16.62■□□□□ 0.25
CLN6-202ENST00000538696 PRDX3P30048 256 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms