RNA–Protein interactions for RNA: ENST00000538485.6

EFCAB11-202, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2 BASIC

Gene EFCAB11, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-202ENST00000538485 KRT6BP04259 564 aa18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 PRR35P0CG20 571 aa18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 XRCC1P18887 633 aaPredicted RBP18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 KRT6CP48668 564 aa18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 NEK2P51955 445 aa18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 TBCCQ15814 346 aa18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 RNF165Q6ZSG1 346 aa18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 C11orf74Q86VG3 221 aa18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 SFRP1Q8N474 314 aa18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 SLC37A2Q8TED4 501 aa18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 MAGEB10Q96LZ2 347 aaPredicted RBP18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 HAUS8Q9BT25 410 aa18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 ELOVL6Q9H5J4 265 aa18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 ZNF385DQ9H6B1 395 aa18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 CPNE7Q9UBL6 633 aa18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 SNX6Q9UNH7 406 aa18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 PI4KAP42356 2102 aa18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 TNRC6BQ9UPQ9 1833 aaKnown RBP18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 A0A1B0GVT2 93 aa18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 UBDO15205 165 aa18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 PDYNP01213 254 aa18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 ALDOCP09972 364 aaKnown RBP18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 T-ENOLP0DO92 83 aa18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 HNF4AP41235 474 aa18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 LACTB2Q53H82 288 aaPredicted RBP18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 FRG2Q64ET8 278 aa18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 ATG9BQ674R7 924 aa18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 GRHL2Q6ISB3 625 aa18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 TRIM46Q7Z4K8 759 aa18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 FBXL6Q8N531 539 aa18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 OR4E2Q8NGC2 313 aa18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 LMX1AQ8TE12 382 aa18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 SELENOMQ8WWX9 145 aa18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 LCN9Q8WX39 176 aa18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 WDR34Q96EX3 536 aa18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 PTCD3Q96EY7 689 aaKnown RBP18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 FRG2BQ96QU4 278 aa18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 ARL8BQ9NVJ2 186 aa18.82■□□□□ 0.6
EFCAB11-202ENST00000538485 CABIN1Q9Y6J0 2220 aa18.81■□□□□ 0.6
EFCAB11-202ENST00000538485 KIR2DS5A0A0G2JLQ3 304 aa18.81■□□□□ 0.6
EFCAB11-202ENST00000538485 A0A0G2JNG1 304 aa18.81■□□□□ 0.6
EFCAB11-202ENST00000538485 OR5K4A6NMS3 321 aa18.81■□□□□ 0.6
EFCAB11-202ENST00000538485 H0YIV9 168 aa18.81■□□□□ 0.6
EFCAB11-202ENST00000538485 KIR2DS3K7RE56 304 aa18.81■□□□□ 0.6
EFCAB11-202ENST00000538485 KDM1AO60341 852 aa18.81■□□□□ 0.6
EFCAB11-202ENST00000538485 VPS4BO75351 444 aa18.81■□□□□ 0.6
EFCAB11-202ENST00000538485 C1GALT1C1LP0DN25 315 aa18.81■□□□□ 0.6
EFCAB11-202ENST00000538485 HNRNPKP61978 463 aaKnown RBP eCLIP18.81■□□□□ 0.6
EFCAB11-202ENST00000538485 UBE2IP63279 158 aaKnown RBP18.81■□□□□ 0.6
EFCAB11-202ENST00000538485 GPR18Q14330 331 aa18.81■□□□□ 0.6
EFCAB11-202ENST00000538485 KIR2DS5Q14953 304 aa18.81■□□□□ 0.6
EFCAB11-202ENST00000538485 NXPE4Q6UWF7 544 aa18.81■□□□□ 0.6
EFCAB11-202ENST00000538485 AMIGO1Q86WK6 493 aa18.81■□□□□ 0.6
EFCAB11-202ENST00000538485 TRIM48Q8IWZ4 208 aa18.81■□□□□ 0.6
EFCAB11-202ENST00000538485 OR2A1Q8NGT9 310 aa18.81■□□□□ 0.6
EFCAB11-202ENST00000538485 WDR20Q8TBZ3 569 aa18.81■□□□□ 0.6
EFCAB11-202ENST00000538485 ZDHHC1Q8WTX9 485 aa18.81■□□□□ 0.6
EFCAB11-202ENST00000538485 NELL1Q92832 810 aa18.81■□□□□ 0.6
EFCAB11-202ENST00000538485 PCBD2Q9H0N5 130 aa18.81■□□□□ 0.6
EFCAB11-202ENST00000538485 EHD1Q9H4M9 534 aa18.81■□□□□ 0.6
EFCAB11-202ENST00000538485 RIC8BQ9NVN3 520 aa18.81■□□□□ 0.6
EFCAB11-202ENST00000538485 GEMIN8Q9NWZ8 242 aaKnown RBP18.81■□□□□ 0.6
EFCAB11-202ENST00000538485 COPG1Q9Y678 874 aaKnown RBP18.81■□□□□ 0.6
EFCAB11-202ENST00000538485 A0A1B0GTW7 788 aa18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 LSM1O15116 133 aaKnown RBP18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 YY2O15391 372 aa18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 VIPP01282 170 aa18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 CDH1P12830 882 aa18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 LBPP18428 481 aa18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 HMGCS1Q01581 520 aa18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 DMTNQ08495 405 aa18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 KRT72Q14CN4 511 aa18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 C6orf136Q5SQH8 315 aa18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 C17orf64Q86WR6 236 aa18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 HOMEZQ8IX15 550 aa18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 CPSF7Q8N684 471 aaKnown RBP18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 ZNF548Q8NEK5 533 aaPredicted RBP18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 SPNS1Q9H2V7 528 aa18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 POT1Q9NUX5 634 aa18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 SPHK1Q9NYA1 384 aa18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 OR6C2Q9NZP2 312 aa18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 SPASTQ9UBP0 616 aa18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 PILRBQ9UKJ0 227 aa18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 SLC12A4Q9UP95 1085 aa18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 HEATR5BQ9P2D3 2071 aa18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 SNRNP200O75643 2136 aaKnown RBP18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 B4DGG1 531 aa18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 ANKRD65E5RJM6 399 aa18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 AQP9O43315 295 aa18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 PRICKLE3O43900 615 aaPredicted RBP18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 SDC3O75056 442 aa18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 GNSP15586 552 aa18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 CD1EP15812 388 aa18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 PEBP1P30086 187 aaKnown RBP18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 SHMT2P34897 504 aa18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 MEF2AQ02078 507 aaPredicted RBP18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 TEAD4Q15561 434 aa18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 KIF19Q2TAC6 998 aa18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 ATP6AP1LQ52LC2 224 aa18.8■□□□□ 0.6
EFCAB11-202ENST00000538485 ADNP2Q6IQ32 1131 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms