RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 DGUOKQ16854 277 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 SPIN4Q56A73 249 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 RNASE12Q5GAN4 147 aaKnown RBP5.22□□□□□ -1.57
LRP6-203ENST00000538239 TTC23Q5W5X9 447 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 RPS27LQ71UM5 84 aaKnown RBP5.22□□□□□ -1.57
LRP6-203ENST00000538239 LRRTM3Q86VH5 581 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 TRAM1L1Q8N609 369 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 GSTCDQ8NEC7 633 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 TCEAL4Q96EI5 215 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 ZCCHC3Q9NUD5 404 aaKnown RBP5.22□□□□□ -1.57
LRP6-203ENST00000538239 ACSL5Q9ULC5 683 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 RNF11Q9Y3C5 154 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 NOX1Q9Y5S8 564 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.22□□□□□ -1.57
LRP6-203ENST00000538239 H7BY64 318 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 MAP2K7O14733 419 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 IDH3BO43837 385 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 HCN1O60741 890 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 SHOX2O60902 331 aaPredicted RBP5.22□□□□□ -1.57
LRP6-203ENST00000538239 COQ9O75208 318 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 NME6O75414 186 aaPredicted RBP5.22□□□□□ -1.57
LRP6-203ENST00000538239 CHRM1P11229 460 aaPredicted RBP5.22□□□□□ -1.57
LRP6-203ENST00000538239 ACRV1P26436 265 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 GNALP38405 381 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 DNASE1L1P49184 302 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 ARFIP1P53367 373 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 PER3P56645 1201 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 ELAVL3Q14576 367 aaKnown RBP5.22□□□□□ -1.57
LRP6-203ENST00000538239 ANKRD26P1Q6NSI1 321 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 AGTRAPQ6RW13 159 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 ABRAXAS1Q6UWZ7 409 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 CXXC5Q7LFL8 322 aaKnown RBP5.22□□□□□ -1.57
LRP6-203ENST00000538239 TRPV1Q8NER1 839 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 KBTBD7Q8WVZ9 684 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 RIT1Q92963 219 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 GLYATL1Q969I3 302 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 PRAP1Q96NZ9 151 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 HEBP1Q9NRV9 189 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 CYTH4Q9UIA0 394 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 PRPF19Q9UMS4 504 aaKnown RBP5.22□□□□□ -1.57
LRP6-203ENST00000538239 IGKV6-21A0A0C4DH24 114 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 A0A1B0GW55 424 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 TULP3O75386 442 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 OAS1P00973 400 aaKnown RBP5.22□□□□□ -1.57
LRP6-203ENST00000538239 DUX4L2P0CJ85 424 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 DUX4L3P0CJ86 424 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 DUX4L4P0CJ87 422 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 DUX4L5P0CJ88 424 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 DUX4L6P0CJ89 424 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 DUX4L7P0CJ90 424 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 IMPDH1P20839 514 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 DRD1P21728 446 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 OTX2P32243 289 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 CRISP3P54108 245 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 KCNJ2P63252 427 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 ELF3P78545 371 aaPredicted RBP5.22□□□□□ -1.57
LRP6-203ENST00000538239 KRR1Q13601 381 aaKnown RBP5.22□□□□□ -1.57
LRP6-203ENST00000538239 SLC9B1Q4ZJI4 515 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 FRG2Q64ET8 278 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 HPS6Q86YV9 775 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 OR4F6Q8NGB9 312 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 SLC35B2Q8TB61 432 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 SNX33Q8WV41 574 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 DDX1Q92499 740 aaKnown RBP5.22□□□□□ -1.57
LRP6-203ENST00000538239 TOP1MTQ969P6 601 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 FRG2BQ96QU4 278 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 IFT27Q9BW83 186 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 OR8D2Q9GZM6 311 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 NMUR2Q9GZQ4 415 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 R3HDMLQ9H3Y0 253 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 SLC35C2Q9NQQ7 365 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 GRHL1Q9NZI5 618 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 EHD3Q9NZN3 535 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 DUX4Q9UBX2 424 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 FEZF1A0PJY2 475 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 DYTNA2CJ06 578 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 FADS2P1A8MWK0 482 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 CCNB2O95067 398 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 FADS2O95864 444 aaKnown RBP5.22□□□□□ -1.57
LRP6-203ENST00000538239 IGFBP5P24593 272 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 RING1Q06587 406 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 SMU1Q2TAY7 513 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 PTCHD3Q3KNS1 767 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 KLHL17Q6TDP4 642 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 CILP2Q8IUL8 1156 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 RASSF5Q8WWW0 418 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 EZH1Q92800 747 aaPredicted RBP5.22□□□□□ -1.57
LRP6-203ENST00000538239 UHRF1Q96T88 793 aaPredicted RBP5.22□□□□□ -1.57
LRP6-203ENST00000538239 C17orf62Q9BQA9 187 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 MTG2Q9H4K7 406 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 PHF11Q9UIL8 331 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 H0YGN5 161 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 MED26O95402 600 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 RCVRNP35243 200 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 RPL26P61254 145 aaKnown RBP5.22□□□□□ -1.57
LRP6-203ENST00000538239 MAPK14Q16539 360 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 DEFB133Q30KQ1 61 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 OR4F3Q6IEY1 312 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 CHST14Q8NCH0 376 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 UBASH3BQ8TF42 649 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms