RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 OTULINQ96BN8 352 aa7□□□□□ -1.29
MSH6-209ENST00000538136 MSANTD3Q96H12 275 aa7□□□□□ -1.29
MSH6-209ENST00000538136 THUMPD3Q9BV44 507 aaKnown RBP7□□□□□ -1.29
MSH6-209ENST00000538136 LDHAL6BQ9BYZ2 381 aaPredicted RBP7□□□□□ -1.29
MSH6-209ENST00000538136 KCNH6Q9H252 994 aa7□□□□□ -1.29
MSH6-209ENST00000538136 ACTR10Q9NZ32 417 aa7□□□□□ -1.29
MSH6-209ENST00000538136 ADA2Q9NZK5 511 aa7□□□□□ -1.29
MSH6-209ENST00000538136 MID2Q9UJV3 735 aa7□□□□□ -1.29
MSH6-209ENST00000538136 SLC13A4Q9UKG4 626 aa7□□□□□ -1.29
MSH6-209ENST00000538136 PCDHGA2Q9Y5H1 932 aa7□□□□□ -1.29
MSH6-209ENST00000538136 FUCA1P04066 466 aa7□□□□□ -1.29
MSH6-209ENST00000538136 KLK1P06870 262 aa7□□□□□ -1.29
MSH6-209ENST00000538136 MLNP12872 115 aa7□□□□□ -1.29
MSH6-209ENST00000538136 PRDX3P30048 256 aaKnown RBP7□□□□□ -1.29
MSH6-209ENST00000538136 AQP5P55064 265 aa7□□□□□ -1.29
MSH6-209ENST00000538136 PPP2R2AP63151 447 aa7□□□□□ -1.29
MSH6-209ENST00000538136 EIF2B5Q13144 721 aaKnown RBP7□□□□□ -1.29
MSH6-209ENST00000538136 WASHC2DQ5SRD0 308 aa7□□□□□ -1.29
MSH6-209ENST00000538136 CCNYL2Q5T2Q4 361 aa7□□□□□ -1.29
MSH6-209ENST00000538136 TMEM26Q6ZUK4 368 aa7□□□□□ -1.29
MSH6-209ENST00000538136 THOC6Q86W42 341 aaKnown RBP7□□□□□ -1.29
MSH6-209ENST00000538136 SLC22A18ASQ8N1D0 253 aa7□□□□□ -1.29
MSH6-209ENST00000538136 SLC25A45Q8N413 288 aa7□□□□□ -1.29
MSH6-209ENST00000538136 AGBL5Q8NDL9 886 aa7□□□□□ -1.29
MSH6-209ENST00000538136 SLC26A7Q8TE54 656 aa7□□□□□ -1.29
MSH6-209ENST00000538136 SMPDL3AQ92484 453 aa7□□□□□ -1.29
MSH6-209ENST00000538136 PKP4Q99569 1192 aa7□□□□□ -1.29
MSH6-209ENST00000538136 ILKAPQ9H0C8 392 aaPredicted RBP7□□□□□ -1.29
MSH6-209ENST00000538136 MANSC1Q9H8J5 431 aa7□□□□□ -1.29
MSH6-209ENST00000538136 GPN2Q9H9Y4 310 aaPredicted RBP7□□□□□ -1.29
MSH6-209ENST00000538136 KIF26BQ2KJY2 2108 aa7□□□□□ -1.29
MSH6-209ENST00000538136 FNDC1Q4ZHG4 1894 aaPredicted RBP7□□□□□ -1.29
MSH6-209ENST00000538136 VEGFDO43915 354 aa7□□□□□ -1.29
MSH6-209ENST00000538136 TPST1O60507 370 aa7□□□□□ -1.29
MSH6-209ENST00000538136 EBLN1P0CF75 366 aa7□□□□□ -1.29
MSH6-209ENST00000538136 ST6GAL1P15907 406 aa7□□□□□ -1.29
MSH6-209ENST00000538136 AGXTP21549 392 aa7□□□□□ -1.29
MSH6-209ENST00000538136 GABRB3P28472 473 aa7□□□□□ -1.29
MSH6-209ENST00000538136 MSX2P35548 267 aaPredicted RBP7□□□□□ -1.29
MSH6-209ENST00000538136 ZNF140P52738 457 aaPredicted RBP7□□□□□ -1.29
MSH6-209ENST00000538136 LAIR1Q6GTX8 287 aa7□□□□□ -1.29
MSH6-209ENST00000538136 TMEM64Q6YI46 380 aa7□□□□□ -1.29
MSH6-209ENST00000538136 NAXDQ8IW45 347 aa7□□□□□ -1.29
MSH6-209ENST00000538136 NAGSQ8N159 534 aa7□□□□□ -1.29
MSH6-209ENST00000538136 DUSP23Q9BVJ7 150 aa7□□□□□ -1.29
MSH6-209ENST00000538136 ANKHQ9HCJ1 492 aa7□□□□□ -1.29
MSH6-209ENST00000538136 CTPS2Q9NRF8 586 aa7□□□□□ -1.29
MSH6-209ENST00000538136 DCDC2Q9UHG0 476 aa7□□□□□ -1.29
MSH6-209ENST00000538136 ACSL5Q9ULC5 683 aa7□□□□□ -1.29
MSH6-209ENST00000538136 NENFQ9UMX5 172 aa7□□□□□ -1.29
MSH6-209ENST00000538136 SETD2Q9BYW2 2564 aaPredicted RBP6.99□□□□□ -1.29
MSH6-209ENST00000538136 C2orf74A8MZ97 194 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 NR5A2O00482 541 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 CDC40O60508 579 aaKnown RBP eCLIP6.99□□□□□ -1.299e-6■■■□□ 15.9
MSH6-209ENST00000538136 ENO1P06733 434 aaKnown RBP6.99□□□□□ -1.29
MSH6-209ENST00000538136 IVDP26440 423 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 KCNAB2Q13303 367 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 ART3Q13508 389 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 C14orf28Q4W4Y0 310 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 LYPLAL1Q5VWZ2 237 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 TRIM40Q6P9F5 258 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 ACAD11Q709F0 780 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 ZFAND4Q86XD8 727 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 PRSS33Q8NF86 280 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 OR9A4Q8NGU2 314 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 FAM110BQ8TC76 370 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 SLC44A1Q8WWI5 657 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 ATL1Q8WXF7 558 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 LPGAT1Q92604 370 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 NAT6Q93015 286 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 DOCK7Q96N67 2140 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 TRIM55Q9BYV6 548 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 GIMAP4Q9NUV9 329 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 DKK3Q9UBP4 350 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 ZNF212Q9UDV6 495 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 WASHC1A8K0Z3 465 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 PEX12O00623 359 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 GNB5O14775 395 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 LIN7AO14910 233 aaPredicted RBP6.99□□□□□ -1.29
MSH6-209ENST00000538136 RDH16O75452 317 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 OPN1LWP04000 364 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 FTH1P19P0C7X4 201 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 PHEXP78562 749 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 PWP1Q13610 501 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 ARL13AQ5H913 290 aaPredicted RBP6.99□□□□□ -1.29
MSH6-209ENST00000538136 HENMT1Q5T8I9 393 aaKnown RBP6.99□□□□□ -1.29
MSH6-209ENST00000538136 ADNP2Q6IQ32 1131 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 TMIGD1Q6UXZ0 262 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 WASH2PQ6VEQ5 465 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 CDHR3Q6ZTQ4 885 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 GPRIN3Q6ZVF9 776 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 WDR53Q7Z5U6 358 aaPredicted RBP6.99□□□□□ -1.29
MSH6-209ENST00000538136 PPP1R3BQ86XI6 285 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 TEX26Q8N6G2 289 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 CSNK1A1LQ8N752 337 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 RERGLQ9H628 205 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 STOML2Q9UJZ1 356 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 KCND3Q9UK17 655 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 PPIEQ9UNP9 301 aaKnown RBP6.99□□□□□ -1.29
MSH6-209ENST00000538136 PDE10AQ9Y233 779 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms