RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 MAP2K7O14733 419 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 NRP2O60462 931 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 PHF2O75151 1096 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 VPS26AO75436 327 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 MATN4O95460 622 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 ACPPP15309 386 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 PAMP19021 973 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 TPSB2P20231 275 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 CHRM3P20309 590 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 OGNP20774 298 aaKnown RBP9.25□□□□□ -0.93
CHD4-207ENST00000537634 FBLP22087 321 aaKnown RBP9.25□□□□□ -0.93
CHD4-207ENST00000537634 ARNTP27540 789 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 RPA3P35244 121 aaPredicted RBP9.25□□□□□ -0.93
CHD4-207ENST00000537634 KCNJ1P48048 391 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 TERF1P54274 439 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 SARNPP82979 210 aaKnown RBP9.25□□□□□ -0.93
CHD4-207ENST00000537634 KLC1Q07866 573 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 TSTA3Q13630 321 aaPredicted RBP9.25□□□□□ -0.93
CHD4-207ENST00000537634 TPSAB1Q15661 275 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 HIF1AQ16665 826 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 MUM1Q2TAK8 710 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 KIAA0930Q6ICG6 404 aaPredicted RBP9.25□□□□□ -0.93
CHD4-207ENST00000537634 PRMT9Q6P2P2 845 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 CASC4Q6P4E1 433 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 LRRC8BQ6P9F7 803 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 CES3Q6UWW8 571 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 OR4N4Q8N0Y3 316 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 DTWD1Q8N5C7 304 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 OR11G2Q8NGC1 345 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 OR2A1Q8NGT9 310 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 OR9A1PQ8NGU1 263 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 DNAJB14Q8TBM8 379 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 MIEF2Q96C03 454 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 THOC3Q96J01 351 aaKnown RBP9.25□□□□□ -0.93
CHD4-207ENST00000537634 CABS1Q96KC9 395 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 CNDP1Q96KN2 507 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 C5orf34Q96MH7 638 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 BIRC8Q96P09 236 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 TCF12Q99081 682 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 ZFYVE21Q9BQ24 234 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 DPH7Q9BTV6 452 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 ACAT2Q9BWD1 397 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 LHPPQ9H008 270 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 LZTFL1Q9NQ48 299 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 FAM114A2Q9NRY5 505 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 HOMER3Q9NSC5 361 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 SAMD15Q9P1V8 674 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 ZNF282Q9UDV7 671 aaPredicted RBP9.25□□□□□ -0.93
CHD4-207ENST00000537634 ERRFI1Q9UJM3 462 aaPredicted RBP9.25□□□□□ -0.93
CHD4-207ENST00000537634 NOVA2Q9UNW9 492 aaKnown RBP9.25□□□□□ -0.93
CHD4-207ENST00000537634 SLC5A6Q9Y289 635 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 VPS9D1Q9Y2B5 631 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 CRYL1Q9Y2S2 319 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 CSAG2Q9Y5P2 127 aa9.25□□□□□ -0.93
CHD4-207ENST00000537634 SPENQ96T58 3664 aaKnown RBP9.25□□□□□ -0.93
CHD4-207ENST00000537634 OR2A25A4D2G3 310 aa9.24□□□□□ -0.93
CHD4-207ENST00000537634 VSTM2BA6NLU5 285 aa9.24□□□□□ -0.93
CHD4-207ENST00000537634 ZNF839A8K0R7 811 aa9.24□□□□□ -0.93
CHD4-207ENST00000537634 ARHGEF33A8MVX0 844 aa9.24□□□□□ -0.93
CHD4-207ENST00000537634 PRPF4O43172 522 aaKnown RBP eCLIP9.24□□□□□ -0.93
CHD4-207ENST00000537634 CEP104O60308 925 aa9.24□□□□□ -0.93
CHD4-207ENST00000537634 MED26O95402 600 aa9.24□□□□□ -0.93
CHD4-207ENST00000537634 HPP00738 406 aa9.24□□□□□ -0.93
CHD4-207ENST00000537634 CATP04040 527 aaKnown RBP9.24□□□□□ -0.93
CHD4-207ENST00000537634 CCDC175P0C221 793 aa9.24□□□□□ -0.93
CHD4-207ENST00000537634 ZGLP1P0C6A0 271 aa9.24□□□□□ -0.93
CHD4-207ENST00000537634 ERGP11308 486 aa9.24□□□□□ -0.93
CHD4-207ENST00000537634 VPS41P49754 854 aa9.24□□□□□ -0.93
CHD4-207ENST00000537634 ADARP55265 1226 aaKnown RBP9.24□□□□□ -0.93
CHD4-207ENST00000537634 CDC16Q13042 620 aa9.24□□□□□ -0.93
CHD4-207ENST00000537634 FASTKQ14296 549 aaKnown RBP9.24□□□□□ -0.93
CHD4-207ENST00000537634 GBX1Q14549 363 aa9.24□□□□□ -0.93
CHD4-207ENST00000537634 ZNF169Q14929 603 aaPredicted RBP9.24□□□□□ -0.93
CHD4-207ENST00000537634 TRIP13Q15645 432 aaPredicted RBP9.24□□□□□ -0.93
CHD4-207ENST00000537634 KLHL38Q2WGJ6 581 aa9.24□□□□□ -0.93
CHD4-207ENST00000537634 ANKRD20A4Q4UJ75 823 aa9.24□□□□□ -0.93
CHD4-207ENST00000537634 CRB2Q5IJ48 1285 aa9.24□□□□□ -0.93
CHD4-207ENST00000537634 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.24□□□□□ -0.93
CHD4-207ENST00000537634 ARMC3Q5W041 872 aa9.24□□□□□ -0.93
CHD4-207ENST00000537634 B3GNTL1Q67FW5 361 aaPredicted RBP9.24□□□□□ -0.93
CHD4-207ENST00000537634 SUSD1Q6UWL2 747 aa9.24□□□□□ -0.93
CHD4-207ENST00000537634 IGFL2Q6UWQ7 119 aa9.24□□□□□ -0.93
CHD4-207ENST00000537634 MAMDC2Q7Z304 686 aaPredicted RBP9.24□□□□□ -0.93
CHD4-207ENST00000537634 PRSS58Q8IYP2 241 aa9.24□□□□□ -0.93
CHD4-207ENST00000537634 TRIM58Q8NG06 486 aa9.24□□□□□ -0.93
CHD4-207ENST00000537634 STT3BQ8TCJ2 826 aa9.24□□□□□ -0.93
CHD4-207ENST00000537634 SMPDL3AQ92484 453 aa9.24□□□□□ -0.93
CHD4-207ENST00000537634 BARD1Q99728 777 aaKnown RBP9.24□□□□□ -0.93
CHD4-207ENST00000537634 MRPS30Q9NP92 439 aaKnown RBP9.24□□□□□ -0.93
CHD4-207ENST00000537634 UTP6Q9NYH9 597 aaKnown RBP9.24□□□□□ -0.93
CHD4-207ENST00000537634 C3orf18Q9UK00 162 aa9.24□□□□□ -0.93
CHD4-207ENST00000537634 CDC14AQ9UNH5 594 aa9.24□□□□□ -0.93
CHD4-207ENST00000537634 NTNG1Q9Y2I2 539 aa9.24□□□□□ -0.93
CHD4-207ENST00000537634 TCRBV7S3A2A0A539 114 aa9.23□□□□□ -0.93
CHD4-207ENST00000537634 H0YGG7 62 aa9.23□□□□□ -0.93
CHD4-207ENST00000537634 MYO1CO00159 1063 aa9.23□□□□□ -0.93
CHD4-207ENST00000537634 AVILO75366 819 aa9.23□□□□□ -0.93
CHD4-207ENST00000537634 PSIP1O75475 530 aaKnown RBP9.23□□□□□ -0.93
CHD4-207ENST00000537634 USP1O94782 785 aa9.23□□□□□ -0.93
CHD4-207ENST00000537634 CCNDBP1O95273 360 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms