RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 TTC39CQ8N584 583 aa3.79□□□□□ -1.8
CCDC7-208ENST00000537047 RTL3Q8N8U3 475 aaKnown RBP3.79□□□□□ -1.8
CCDC7-208ENST00000537047 C4orf45Q96LM5 186 aa3.79□□□□□ -1.8
CCDC7-208ENST00000537047 NYXQ9GZU5 481 aa3.79□□□□□ -1.8
CCDC7-208ENST00000537047 UNC45AQ9H3U1 944 aa3.79□□□□□ -1.8
CCDC7-208ENST00000537047 KRT84Q9NSB2 600 aa3.79□□□□□ -1.8
CCDC7-208ENST00000537047 OLA1Q9NTK5 396 aaKnown RBP3.79□□□□□ -1.8
CCDC7-208ENST00000537047 ARHGEF38Q9NXL2 777 aa3.79□□□□□ -1.8
CCDC7-208ENST00000537047 WSB2Q9NYS7 404 aaPredicted RBP3.79□□□□□ -1.8
CCDC7-208ENST00000537047 C19orf25Q9UFG5 118 aaPredicted RBP3.79□□□□□ -1.8
CCDC7-208ENST00000537047 TSPAN16Q9UKR8 245 aa3.79□□□□□ -1.8
CCDC7-208ENST00000537047 H0YAE9 185 aa3.78□□□□□ -1.8
CCDC7-208ENST00000537047 CREB3O43889 395 aa3.78□□□□□ -1.8
CCDC7-208ENST00000537047 ZNF354AO60765 605 aaPredicted RBP3.78□□□□□ -1.8
CCDC7-208ENST00000537047 CEACAM4O75871 244 aa3.78□□□□□ -1.8
CCDC7-208ENST00000537047 BCL10O95999 233 aa3.78□□□□□ -1.8
CCDC7-208ENST00000537047 HAPLN1P10915 354 aaPredicted RBP3.78□□□□□ -1.8
CCDC7-208ENST00000537047 C3AR1Q16581 482 aa3.78□□□□□ -1.8
CCDC7-208ENST00000537047 GARNL3Q5VVW2 1013 aa3.78□□□□□ -1.8
CCDC7-208ENST00000537047 JAKMIP3Q5VZ66 844 aa3.78□□□□□ -1.8
CCDC7-208ENST00000537047 DMKNQ6E0U4 476 aaPredicted RBP3.78□□□□□ -1.8
CCDC7-208ENST00000537047 ZBED8Q8IZ13 594 aa3.78□□□□□ -1.8
CCDC7-208ENST00000537047 KLHDC1Q8N7A1 406 aa3.78□□□□□ -1.8
CCDC7-208ENST00000537047 TLE6Q9H808 572 aa3.78□□□□□ -1.8
CCDC7-208ENST00000537047 UMODL1Q5DID0 1318 aa3.77□□□□□ -1.81
CCDC7-208ENST00000537047 USO1O60763 962 aaKnown RBP3.77□□□□□ -1.81
CCDC7-208ENST00000537047 SCGB1D1O95968 90 aa3.77□□□□□ -1.81
CCDC7-208ENST00000537047 PNLIPRP2P54317 469 aa3.77□□□□□ -1.81
CCDC7-208ENST00000537047 CCDC70Q6NSX1 233 aa3.77□□□□□ -1.81
CCDC7-208ENST00000537047 REG3GQ6UW15 175 aa3.77□□□□□ -1.81
CCDC7-208ENST00000537047 CD177Q8N6Q3 437 aa3.77□□□□□ -1.81
CCDC7-208ENST00000537047 THAP8Q8NA92 274 aa3.77□□□□□ -1.81
CCDC7-208ENST00000537047 C9orf43Q8TAL5 461 aaPredicted RBP3.77□□□□□ -1.81
CCDC7-208ENST00000537047 THOC1Q96FV9 657 aaKnown RBP3.77□□□□□ -1.81
CCDC7-208ENST00000537047 TRPV4Q9HBA0 871 aa3.77□□□□□ -1.81
CCDC7-208ENST00000537047 TNFRSF19Q9NS68 423 aa3.77□□□□□ -1.81
CCDC7-208ENST00000537047 POMT2Q9UKY4 750 aa3.77□□□□□ -1.81
CCDC7-208ENST00000537047 ZNF256Q9Y2P7 627 aaPredicted RBP3.77□□□□□ -1.81
CCDC7-208ENST00000537047 NME7Q9Y5B8 376 aa3.77□□□□□ -1.81
CCDC7-208ENST00000537047 IGLV4-3A0A075B6K6 122 aa3.76□□□□□ -1.81
CCDC7-208ENST00000537047 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.76□□□□□ -1.81
CCDC7-208ENST00000537047 CCDC189A1A4V9 331 aa3.76□□□□□ -1.81
CCDC7-208ENST00000537047 OR2A25A4D2G3 310 aa3.76□□□□□ -1.81
CCDC7-208ENST00000537047 TSPAN1O60635 241 aa3.76□□□□□ -1.81
CCDC7-208ENST00000537047 DNASE1P24855 282 aa3.76□□□□□ -1.81
CCDC7-208ENST00000537047 MPZP25189 248 aa3.76□□□□□ -1.81
CCDC7-208ENST00000537047 SLC15A1P46059 708 aa3.76□□□□□ -1.81
CCDC7-208ENST00000537047 KHKP50053 298 aa3.76□□□□□ -1.81
CCDC7-208ENST00000537047 DNA2P51530 1060 aa3.76□□□□□ -1.81
CCDC7-208ENST00000537047 ZNF177Q13360 481 aaPredicted RBP3.76□□□□□ -1.81
CCDC7-208ENST00000537047 MS4A18Q3C1V0 323 aa3.76□□□□□ -1.81
CCDC7-208ENST00000537047 SPECC1Q5M775 1068 aa3.76□□□□□ -1.81
CCDC7-208ENST00000537047 FHL5Q5TD97 284 aa3.76□□□□□ -1.81
CCDC7-208ENST00000537047 DHRS7BQ6IAN0 325 aaPredicted RBP3.76□□□□□ -1.81
CCDC7-208ENST00000537047 C11orf63Q6NUN7 778 aa3.76□□□□□ -1.81
CCDC7-208ENST00000537047 CHMP1BQ7LBR1 199 aa3.76□□□□□ -1.81
CCDC7-208ENST00000537047 ZER1Q7Z7L7 766 aa3.76□□□□□ -1.81
CCDC7-208ENST00000537047 OR4N5Q8IXE1 308 aa3.76□□□□□ -1.81
CCDC7-208ENST00000537047 ZNF595Q8IYB9 648 aa3.76□□□□□ -1.81
CCDC7-208ENST00000537047 SMARCAD1Q9H4L7 1026 aa3.76□□□□□ -1.81
CCDC7-208ENST00000537047 GTSE1Q9NYZ3 720 aa3.76□□□□□ -1.81
CCDC7-208ENST00000537047 KIF25-AS1Q9Y6Z4 181 aa3.76□□□□□ -1.81
CCDC7-208ENST00000537047 SELEP16581 610 aa3.75□□□□□ -1.81
CCDC7-208ENST00000537047 TNFAIP3P21580 790 aa3.75□□□□□ -1.81
CCDC7-208ENST00000537047 OR3A2P47893 321 aa3.75□□□□□ -1.81
CCDC7-208ENST00000537047 DHODHQ02127 395 aa3.75□□□□□ -1.81
CCDC7-208ENST00000537047 PTPN14Q15678 1187 aa3.75□□□□□ -1.81
CCDC7-208ENST00000537047 IGSF11Q5DX21 431 aa3.75□□□□□ -1.81
CCDC7-208ENST00000537047 TMEM211Q6ICI0 200 aa3.75□□□□□ -1.81
CCDC7-208ENST00000537047 ADCK1Q86TW2 530 aa3.75□□□□□ -1.81
CCDC7-208ENST00000537047 LGI2Q8N0V4 545 aa3.75□□□□□ -1.81
CCDC7-208ENST00000537047 OR7A2PQ8NGA2 310 aa3.75□□□□□ -1.81
CCDC7-208ENST00000537047 ZIM3Q96PE6 472 aa3.75□□□□□ -1.81
CCDC7-208ENST00000537047 EIF2B3Q9NR50 452 aaKnown RBP3.75□□□□□ -1.81
CCDC7-208ENST00000537047 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.75□□□□□ -1.81
CCDC7-208ENST00000537047 TRBV4-1A0A0J9YWV2 114 aa3.74□□□□□ -1.81
CCDC7-208ENST00000537047 PI4KAP2A4QPH2 592 aa3.74□□□□□ -1.81
CCDC7-208ENST00000537047 PGPEP1LA6NFU8 196 aa3.74□□□□□ -1.81
CCDC7-208ENST00000537047 PTGES3LE9PB15 166 aa3.74□□□□□ -1.81
CCDC7-208ENST00000537047 K7EQD1 137 aa3.74□□□□□ -1.81
CCDC7-208ENST00000537047 PRB2P02812 416 aaPredicted RBP3.74□□□□□ -1.81
CCDC7-208ENST00000537047 PRKAR1AP10644 381 aa3.74□□□□□ -1.81
CCDC7-208ENST00000537047 CD27P26842 260 aa3.74□□□□□ -1.81
CCDC7-208ENST00000537047 ATP4BP51164 291 aa3.74□□□□□ -1.81
CCDC7-208ENST00000537047 CDH13P55290 713 aa3.74□□□□□ -1.81
CCDC7-208ENST00000537047 HNRNPKP61978 463 aaKnown RBP eCLIP3.74□□□□□ -1.81
CCDC7-208ENST00000537047 GPR33Q49SQ1 333 aa3.74□□□□□ -1.81
CCDC7-208ENST00000537047 NUP54Q7Z3B4 507 aa3.74□□□□□ -1.81
CCDC7-208ENST00000537047 PHC2Q8IXK0 858 aa3.74□□□□□ -1.81
CCDC7-208ENST00000537047 C11orf42Q8N5U0 333 aa3.74□□□□□ -1.81
CCDC7-208ENST00000537047 RHOXF1Q8NHV9 184 aa3.74□□□□□ -1.81
CCDC7-208ENST00000537047 SYN2Q92777 582 aaPredicted RBP3.74□□□□□ -1.81
CCDC7-208ENST00000537047 SPDL1Q96EA4 605 aa3.74□□□□□ -1.81
CCDC7-208ENST00000537047 MS4A10Q96PG2 267 aa3.74□□□□□ -1.81
CCDC7-208ENST00000537047 ANAPC11Q9NYG5 84 aa3.74□□□□□ -1.81
CCDC7-208ENST00000537047 NYAP2Q9P242 653 aa3.74□□□□□ -1.81
CCDC7-208ENST00000537047 BAIAP2L1Q9UHR4 511 aa3.74□□□□□ -1.81
CCDC7-208ENST00000537047 FBXO2Q9UK22 296 aaPredicted RBP3.74□□□□□ -1.81
CCDC7-208ENST00000537047 PADI2Q9Y2J8 665 aa3.74□□□□□ -1.81
CCDC7-208ENST00000537047 ARID2Q68CP9 1835 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms