RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 SLIRPQ9GZT3 109 aaKnown RBP5.27□□□□□ -1.57
PTPRD-213ENST00000537002 TLR8Q9NR97 1041 aaKnown RBP5.27□□□□□ -1.57
PTPRD-213ENST00000537002 HMX2A2RU54 273 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 PGRMC2O15173 223 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 OR2B3O76000 313 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 APOL3O95236 402 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 FKBP1AP62942 108 aaKnown RBP5.27□□□□□ -1.57
PTPRD-213ENST00000537002 COL28A1Q2UY09 1125 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 PAN2Q504Q3 1202 aaKnown RBP5.27□□□□□ -1.57
PTPRD-213ENST00000537002 FAM171BQ6P995 826 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 METTL4Q8N3J2 472 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 COQ8AQ8NI60 647 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 HASPINQ8TF76 798 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 SLC13A3Q8WWT9 602 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 PORCNQ9H237 461 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 SMURF1Q9HCE7 757 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 FAM118AQ9NWS6 357 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 SLC27A5Q9Y2P5 690 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 TMX2Q9Y320 296 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 A0A1B0GVI7 797 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 AP2A1O95782 977 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 PLATP00750 562 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 CYBBP04839 570 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 TYMPP19971 482 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 CXCR3P49682 368 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 DNAJB7Q7Z6W7 309 aaPredicted RBP5.27□□□□□ -1.57
PTPRD-213ENST00000537002 NDRG1Q92597 394 aaKnown RBP5.27□□□□□ -1.57
PTPRD-213ENST00000537002 KAT6AQ92794 2004 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 COL21A1Q96P44 957 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 KLHL5Q96PQ7 755 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 MYOCQ99972 504 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 SLITRK2Q9H156 845 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 GORASP2Q9H8Y8 452 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 TRPM5Q9NZQ8 1165 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 GSAPA4D1B5 854 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 SOWAHBA6NEL2 793 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 UNCXA6NJT0 531 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 A8MX80 341 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 PLOD2O00469 737 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 VNN1O95497 513 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 CST3P01034 146 aaPredicted RBP5.27□□□□□ -1.57
PTPRD-213ENST00000537002 CKMT1AP12532 417 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 CYP2C18P33260 490 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 ATXN1P54253 815 aaKnown RBP5.27□□□□□ -1.57
PTPRD-213ENST00000537002 TAS2R39P59534 338 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 ARF5P84085 180 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 UAP1L1Q3KQV9 507 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 BTN2A1Q7KYR7 527 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 SAMD7Q7Z3H4 446 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 SPATA22Q8NHS9 363 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 YIPF6Q96EC8 236 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 TMEM80Q96HE8 168 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 MMP28Q9H239 520 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 BEX1Q9HBH7 125 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 PLCXD1Q9NUJ7 323 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 FKBP7Q9Y680 259 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 SLC12A8A0AV02 714 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 LRRC14BA6NHZ5 514 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 CDRT1O95170 752 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 GNAO1P09471 354 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 ZNF7P17097 686 aaPredicted RBP5.27□□□□□ -1.57
PTPRD-213ENST00000537002 RAB3AP20336 220 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 PTPN3P26045 913 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 HTR1BP28222 390 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 TNK1Q13470 666 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 MLIPQ5VWP3 458 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 OLFML2AQ68BL7 652 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 ESRP1Q6NXG1 681 aaKnown RBP5.27□□□□□ -1.57
PTPRD-213ENST00000537002 OR6C4Q8NGE1 309 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 CAPNS2Q96L46 248 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 ZFP3Q96NJ6 502 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 SLC38A2Q96QD8 506 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 IL1RAPQ9NPH3 570 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 TMPRSS4Q9NRS4 437 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 ERAP1Q9NZ08 941 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 COPZ2Q9P299 210 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 UBQLN2Q9UHD9 624 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 SPIN1Q9Y657 262 aaPredicted RBP5.27□□□□□ -1.57
PTPRD-213ENST00000537002 CLCA3PQ9Y6N3 262 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 CCDC85CA6NKD9 419 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 ISM1B1AKI9 464 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 M0R233 179 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 ACKR2O00590 384 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 RAMP2O60895 175 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 CCNB2O95067 398 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 ITGB5P18084 799 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 EFNA1P20827 205 aaPredicted RBP5.27□□□□□ -1.57
PTPRD-213ENST00000537002 PRMT2P55345 433 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 NATD1Q8N6N6 113 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 TEX47Q8TBZ9 253 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 FBLIM1Q8WUP2 373 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 FNDC11Q9BVV2 318 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 ZNF69Q9UC07 566 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 GPN3Q9UHW5 284 aaPredicted RBP5.27□□□□□ -1.57
PTPRD-213ENST00000537002 MAGED1Q9Y5V3 778 aaPredicted RBP5.27□□□□□ -1.57
PTPRD-213ENST00000537002 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.26□□□□□ -1.57
PTPRD-213ENST00000537002 FAM234BA2RU67 622 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 SCN2BO60939 215 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 DIRAS1O95057 198 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 TSPAN12O95859 305 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms