RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 KRT80Q6KB66 452 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 TMEM184AQ6ZMB5 413 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 TRAPPC5Q8IUR0 188 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 RIMKLAQ8IXN7 391 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 C12orf76Q8N812 135 aaPredicted RBP13.16□□□□□ -0.3
SMG6-203ENST00000536871 PHC3Q8NDX5 983 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 VPS37AQ8NEZ2 397 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 OR8J2Q8NGG1 315 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 OR2L2Q8NH16 312 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 SETD7Q8WTS6 366 aaKnown RBP13.16□□□□□ -0.3
SMG6-203ENST00000536871 NELL1Q92832 810 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 MTFMTQ96DP5 389 aaKnown RBP13.16□□□□□ -0.3
SMG6-203ENST00000536871 HIC2Q96JB3 615 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 PKP4Q99569 1192 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 SPATA9Q9BWV2 254 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 MAGIXQ9H6Y5 334 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 RPF2Q9H7B2 306 aaKnown RBP13.16□□□□□ -0.3
SMG6-203ENST00000536871 SIRT5Q9NXA8 310 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 CDH7Q9ULB5 785 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 TSC22D4Q9Y3Q8 395 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 MGAT4DA6NG13 374 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 EVPLLA8MZ36 301 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 SPINT1O43278 529 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 LILRB5O75023 590 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 SOD1P00441 154 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 PABPC4LP0CB38 370 aaKnown RBP13.16□□□□□ -0.3
SMG6-203ENST00000536871 MTHFD1P11586 935 aaKnown RBP13.16□□□□□ -0.3
SMG6-203ENST00000536871 MYOGP15173 224 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 PPIBP23284 216 aaKnown RBP13.16□□□□□ -0.3
SMG6-203ENST00000536871 IMPA1P29218 277 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 RPL3P39023 403 aaKnown RBP13.16□□□□□ -0.3
SMG6-203ENST00000536871 RPL5P46777 297 aaKnown RBP13.16□□□□□ -0.3
SMG6-203ENST00000536871 OR4D2P58180 307 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 MTPNP58546 118 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 DOC2AQ14183 400 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 AGERQ15109 404 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 NRF1Q16656 503 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 C6orf52Q5T4I8 152 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 MED27Q6P2C8 311 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 ERICH5Q6P6B1 374 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 LPCAT2Q7L5N7 544 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 CARM1Q86X55 608 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 SYT12Q8IV01 421 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 MICU2Q8IYU8 434 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 ZNF548Q8NEK5 533 aaPredicted RBP13.16□□□□□ -0.3
SMG6-203ENST00000536871 OR9A1PQ8NGU1 263 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 APOLD1Q96LR9 279 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 RDH12Q96NR8 316 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 CHID1Q9BWS9 393 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 KAT8Q9H7Z6 458 aaKnown RBP13.16□□□□□ -0.3
SMG6-203ENST00000536871 HPS4Q9NQG7 708 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 OLAHQ9NV23 265 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 ZNF639Q9UID6 485 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 CORO2BQ9UQ03 480 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 DLGAP4Q9Y2H0 992 aa13.16□□□□□ -0.3
SMG6-203ENST00000536871 EIF4E1BA6NMX2 242 aaKnown RBP13.15□□□□□ -0.3
SMG6-203ENST00000536871 FOXE1O00358 373 aaPredicted RBP13.15□□□□□ -0.3
SMG6-203ENST00000536871 PI15O43692 258 aa13.15□□□□□ -0.3
SMG6-203ENST00000536871 DFNA5O60443 496 aa13.15□□□□□ -0.3
SMG6-203ENST00000536871 SLC16A8O95907 504 aa13.15□□□□□ -0.3
SMG6-203ENST00000536871 EPS8Q12929 822 aa13.15□□□□□ -0.3
SMG6-203ENST00000536871 POM121L1PQ3SYA9 428 aa13.15□□□□□ -0.3
SMG6-203ENST00000536871 NHSL2Q5HYW2 709 aa13.15□□□□□ -0.3
SMG6-203ENST00000536871 ANXA8L1Q5VT79 327 aa13.15□□□□□ -0.3
SMG6-203ENST00000536871 GET4Q7L5D6 327 aaPredicted RBP13.15□□□□□ -0.3
SMG6-203ENST00000536871 CFAP206Q8IYR0 622 aa13.15□□□□□ -0.3
SMG6-203ENST00000536871 EID3Q8N140 333 aa13.15□□□□□ -0.3
SMG6-203ENST00000536871 DTWD1Q8N5C7 304 aa13.15□□□□□ -0.3
SMG6-203ENST00000536871 KRTCAP2Q8N6L1 136 aa13.15□□□□□ -0.3
SMG6-203ENST00000536871 DNAJC5GQ8N7S2 189 aa13.15□□□□□ -0.3
SMG6-203ENST00000536871 ZNF366Q8N895 744 aa13.15□□□□□ -0.3
SMG6-203ENST00000536871 TFAP2CQ92754 450 aa13.15□□□□□ -0.3
SMG6-203ENST00000536871 FAM120BQ96EK7 910 aaKnown RBP13.15□□□□□ -0.3
SMG6-203ENST00000536871 MED8Q96G25 268 aa13.15□□□□□ -0.3
SMG6-203ENST00000536871 REXO5Q96IC2 774 aaKnown RBP13.15□□□□□ -0.3
SMG6-203ENST00000536871 PAIP1Q9H074 479 aaKnown RBP13.15□□□□□ -0.3
SMG6-203ENST00000536871 SGK2Q9HBY8 427 aa13.15□□□□□ -0.3
SMG6-203ENST00000536871 ADGRE2Q9UHX3 823 aa13.15□□□□□ -0.3
SMG6-203ENST00000536871 PPT2Q9UMR5 302 aa13.15□□□□□ -0.3
SMG6-203ENST00000536871 ITM2BQ9Y287 266 aa13.15□□□□□ -0.3
SMG6-203ENST00000536871 FADS3Q9Y5Q0 445 aa13.15□□□□□ -0.3
SMG6-203ENST00000536871 KIAA0100Q14667 2235 aaKnown RBP13.15□□□□□ -0.3
SMG6-203ENST00000536871 PIKFYVEQ9Y2I7 2098 aa13.15□□□□□ -0.3
SMG6-203ENST00000536871 C7orf72A4D263 438 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 TMEM202A6NGA9 273 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 RFXANKO14593 260 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 CLOCKO15516 846 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 CLPTM1O96005 669 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 ADH1BP00325 375 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 APODP05090 189 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 HLA-EP13747 358 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 FCARP24071 287 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 OXTRP30559 389 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 RANBP1P43487 201 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 PREPP48147 710 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 NEK2P51955 445 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 MYBPC3Q14896 1274 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 ARHGAP19Q14CB8 494 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 DUOXA1Q1HG43 343 aa13.14□□□□□ -0.31
SMG6-203ENST00000536871 CAMKMTQ7Z624 323 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms