RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 A0A1W2PPV9 198 aa17.28■□□□□ 0.36
CCDC61-201ENST00000536603 TMEM150CB9EJG8 249 aa17.28■□□□□ 0.36
CCDC61-201ENST00000536603 SLC16A8O95907 504 aa17.28■□□□□ 0.36
CCDC61-201ENST00000536603 C8GP07360 202 aa17.28■□□□□ 0.36
CCDC61-201ENST00000536603 ERGP11308 486 aa17.28■□□□□ 0.36
CCDC61-201ENST00000536603 CYP2A7P20853 494 aa17.28■□□□□ 0.36
CCDC61-201ENST00000536603 PSMB5P28074 263 aa17.28■□□□□ 0.36
CCDC61-201ENST00000536603 HSD17B2P37059 387 aa17.28■□□□□ 0.36
CCDC61-201ENST00000536603 GP5P40197 560 aa17.28■□□□□ 0.36
CCDC61-201ENST00000536603 PNLIPRP1P54315 467 aa17.28■□□□□ 0.36
CCDC61-201ENST00000536603 FOXK1P85037 733 aa17.28■□□□□ 0.36
CCDC61-201ENST00000536603 ILF2Q12905 390 aaKnown RBP17.28■□□□□ 0.36
CCDC61-201ENST00000536603 TSTA3Q13630 321 aaPredicted RBP17.28■□□□□ 0.36
CCDC61-201ENST00000536603 ZNF460Q14592 562 aa17.28■□□□□ 0.36
CCDC61-201ENST00000536603 ARHGAP19Q14CB8 494 aa17.28■□□□□ 0.36
CCDC61-201ENST00000536603 DEFB109BQ30KR1 87 aa17.28■□□□□ 0.36
CCDC61-201ENST00000536603 SUSD1Q6UWL2 747 aa17.28■□□□□ 0.36
CCDC61-201ENST00000536603 TMEM126BQ8IUX1 230 aa17.28■□□□□ 0.36
CCDC61-201ENST00000536603 CEP97Q8IW35 865 aa17.28■□□□□ 0.36
CCDC61-201ENST00000536603 GALNT6Q8NCL4 622 aa17.28■□□□□ 0.36
CCDC61-201ENST00000536603 PPFIBP2Q8ND30 876 aa17.28■□□□□ 0.36
CCDC61-201ENST00000536603 OR8K5Q8NH50 307 aa17.28■□□□□ 0.36
CCDC61-201ENST00000536603 OR1L3Q8NH93 324 aa17.28■□□□□ 0.36
CCDC61-201ENST00000536603 MCOLN3Q8TDD5 553 aa17.28■□□□□ 0.36
CCDC61-201ENST00000536603 ZNF480Q8WV37 535 aa17.28■□□□□ 0.36
CCDC61-201ENST00000536603 SMPDL3AQ92484 453 aa17.28■□□□□ 0.36
CCDC61-201ENST00000536603 FCRL4Q96PJ5 515 aa17.28■□□□□ 0.36
CCDC61-201ENST00000536603 RBBP8Q99708 897 aa17.28■□□□□ 0.36
CCDC61-201ENST00000536603 TSPYL1Q9H0U9 437 aa17.28■□□□□ 0.36
CCDC61-201ENST00000536603 PARVBQ9HBI1 364 aa17.28■□□□□ 0.36
CCDC61-201ENST00000536603 PDE10AQ9Y233 779 aa17.28■□□□□ 0.36
CCDC61-201ENST00000536603 SPTA1P02549 2419 aa17.28■□□□□ 0.36
CCDC61-201ENST00000536603 SNRNP200O75643 2136 aaKnown RBP17.27■□□□□ 0.36
CCDC61-201ENST00000536603 LOC101059948A0A1B0GTJ6 334 aa17.27■□□□□ 0.36
CCDC61-201ENST00000536603 ZNF839A8K0R7 811 aa17.27■□□□□ 0.36
CCDC61-201ENST00000536603 SLC16A5O15375 505 aa17.27■□□□□ 0.36
CCDC61-201ENST00000536603 HCRTR1O43613 425 aa17.27■□□□□ 0.36
CCDC61-201ENST00000536603 FAM155BO75949 473 aa17.27■□□□□ 0.36
CCDC61-201ENST00000536603 MSL3P1P0C860 447 aa17.27■□□□□ 0.36
CCDC61-201ENST00000536603 SLC12A2P55011 1212 aa17.27■□□□□ 0.36
CCDC61-201ENST00000536603 CDC20Q12834 499 aa17.27■□□□□ 0.36
CCDC61-201ENST00000536603 EFTUD2Q15029 972 aaKnown RBP eCLIP17.27■□□□□ 0.361e-6■■■■■ 39.2
CCDC61-201ENST00000536603 DEFB110Q30KQ9 67 aa17.27■□□□□ 0.36
CCDC61-201ENST00000536603 GRTP1Q5TC63 336 aa17.27■□□□□ 0.36
CCDC61-201ENST00000536603 PRAMEF17Q5VTA0 474 aa17.27■□□□□ 0.36
CCDC61-201ENST00000536603 C16orf46Q6P387 395 aa17.27■□□□□ 0.36
CCDC61-201ENST00000536603 FIGLAQ6QHK4 219 aa17.27■□□□□ 0.36
CCDC61-201ENST00000536603 C6orf15Q6UXA7 325 aaPredicted RBP17.27■□□□□ 0.36
CCDC61-201ENST00000536603 SYTL1Q8IYJ3 562 aa17.27■□□□□ 0.36
CCDC61-201ENST00000536603 OR2A1Q8NGT9 310 aa17.27■□□□□ 0.36
CCDC61-201ENST00000536603 APOBEC4Q8WW27 367 aaKnown RBP17.27■□□□□ 0.36
CCDC61-201ENST00000536603 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.27■□□□□ 0.369e-8■■■■■ 72
CCDC61-201ENST00000536603 N4BP2L2Q92802 583 aaPredicted RBP17.27■□□□□ 0.36
CCDC61-201ENST00000536603 MIPEPQ99797 713 aa17.27■□□□□ 0.36
CCDC61-201ENST00000536603 ACAT2Q9BWD1 397 aa17.27■□□□□ 0.36
CCDC61-201ENST00000536603 CHRNA10Q9GZZ6 450 aa17.27■□□□□ 0.36
CCDC61-201ENST00000536603 INTS7Q9NVH2 962 aaKnown RBP17.27■□□□□ 0.36
CCDC61-201ENST00000536603 SERTAD3Q9UJW9 196 aa17.27■□□□□ 0.36
CCDC61-201ENST00000536603 SPTBP11277 2137 aa17.26■□□□□ 0.35
CCDC61-201ENST00000536603 COL12A1Q99715 3063 aa17.26■□□□□ 0.35
CCDC61-201ENST00000536603 E7ENX8 843 aa17.26■□□□□ 0.35
CCDC61-201ENST00000536603 SCRG1O75711 98 aa17.26■□□□□ 0.35
CCDC61-201ENST00000536603 FKBP9O95302 570 aa17.26■□□□□ 0.35
CCDC61-201ENST00000536603 GP1BBP13224 206 aa17.26■□□□□ 0.35
CCDC61-201ENST00000536603 ZNF37AP17032 561 aaPredicted RBP17.26■□□□□ 0.35
CCDC61-201ENST00000536603 TCN2P20062 427 aa17.26■□□□□ 0.35
CCDC61-201ENST00000536603 PHBP35232 272 aa17.26■□□□□ 0.35
CCDC61-201ENST00000536603 RPA3P35244 121 aaPredicted RBP17.26■□□□□ 0.35
CCDC61-201ENST00000536603 SPRP35270 261 aaPredicted RBP17.26■□□□□ 0.35
CCDC61-201ENST00000536603 MC1RQ01726 317 aa17.26■□□□□ 0.35
CCDC61-201ENST00000536603 POU4F1Q01851 419 aa17.26■□□□□ 0.35
CCDC61-201ENST00000536603 TAP2Q03519 686 aa17.26■□□□□ 0.35
CCDC61-201ENST00000536603 SP140Q13342 867 aa17.26■□□□□ 0.35
CCDC61-201ENST00000536603 USP10Q14694 798 aaKnown RBP17.26■□□□□ 0.35
CCDC61-201ENST00000536603 UAP1Q16222 522 aaPredicted RBP17.26■□□□□ 0.35
CCDC61-201ENST00000536603 PHKG1Q16816 387 aa17.26■□□□□ 0.35
CCDC61-201ENST00000536603 FCRL6Q6DN72 434 aa17.26■□□□□ 0.35
CCDC61-201ENST00000536603 DNAJC22Q8N4W6 341 aa17.26■□□□□ 0.35
CCDC61-201ENST00000536603 NKAPQ8N5F7 415 aaKnown RBP17.26■□□□□ 0.35
CCDC61-201ENST00000536603 ESX1Q8N693 406 aa17.26■□□□□ 0.35
CCDC61-201ENST00000536603 OR2L3Q8NG85 312 aa17.26■□□□□ 0.35
CCDC61-201ENST00000536603 MRRFQ96E11 262 aaKnown RBP17.26■□□□□ 0.35
CCDC61-201ENST00000536603 ABHD17AQ96GS6 310 aa17.26■□□□□ 0.35
CCDC61-201ENST00000536603 PDLIM5Q96HC4 596 aaKnown RBP17.26■□□□□ 0.35
CCDC61-201ENST00000536603 CCDC138Q96M89 665 aa17.26■□□□□ 0.35
CCDC61-201ENST00000536603 CAB39LQ9H9S4 337 aa17.26■□□□□ 0.35
CCDC61-201ENST00000536603 GPAMQ9HCL2 828 aa17.26■□□□□ 0.35
CCDC61-201ENST00000536603 ABCF3Q9NUQ8 709 aa17.26■□□□□ 0.35
CCDC61-201ENST00000536603 ACSL3O95573 720 aa17.25■□□□□ 0.35
CCDC61-201ENST00000536603 TUBBP07437 444 aa17.25■□□□□ 0.35
CCDC61-201ENST00000536603 HIST1H2AGP0C0S8 130 aaPredicted RBP17.25■□□□□ 0.35
CCDC61-201ENST00000536603 HIST1H2ADP20671 130 aa17.25■□□□□ 0.35
CCDC61-201ENST00000536603 IMPA1P29218 277 aa17.25■□□□□ 0.35
CCDC61-201ENST00000536603 CMPK1P30085 196 aa17.25■□□□□ 0.35
CCDC61-201ENST00000536603 GRIA3P42263 894 aa17.25■□□□□ 0.35
CCDC61-201ENST00000536603 GABRA4P48169 554 aa17.25■□□□□ 0.35
CCDC61-201ENST00000536603 PMS2P54278 862 aa17.25■□□□□ 0.35
CCDC61-201ENST00000536603 YBX1P67809 324 aaKnown RBP17.25■□□□□ 0.35
CCDC61-201ENST00000536603 ABHD18Q0P651 414 aa17.25■□□□□ 0.35
CCDC61-201ENST00000536603 NAB1Q13506 487 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms