RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 SLC9A5Q14940 896 aa12.62□□□□□ -0.39
PRKDC-206ENST00000536429 ZXDCQ2QGD7 858 aaPredicted RBP12.62□□□□□ -0.39
PRKDC-206ENST00000536429 UBAP2Q5T6F2 1119 aaKnown RBP12.62□□□□□ -0.39
PRKDC-206ENST00000536429 C8orf74Q6P047 294 aa12.62□□□□□ -0.39
PRKDC-206ENST00000536429 FBXO42Q6P3S6 717 aa12.62□□□□□ -0.39
PRKDC-206ENST00000536429 BORAQ6PGQ7 559 aa12.62□□□□□ -0.39
PRKDC-206ENST00000536429 SLC26A11Q86WA9 606 aa12.62□□□□□ -0.39
PRKDC-206ENST00000536429 CEP97Q8IW35 865 aa12.62□□□□□ -0.39
PRKDC-206ENST00000536429 PALM2Q8IXS6 379 aa12.62□□□□□ -0.39
PRKDC-206ENST00000536429 OR4N4Q8N0Y3 316 aa12.62□□□□□ -0.39
PRKDC-206ENST00000536429 MYO1HQ8N1T3 1032 aa12.62□□□□□ -0.39
PRKDC-206ENST00000536429 ZNF843Q8N446 348 aa12.62□□□□□ -0.39
PRKDC-206ENST00000536429 ENDOVQ8N8Q3 282 aaKnown RBP12.62□□□□□ -0.39
PRKDC-206ENST00000536429 LSM14AQ8ND56 463 aaKnown RBP12.62□□□□□ -0.39
PRKDC-206ENST00000536429 ZUFSPQ96AP4 578 aa12.62□□□□□ -0.39
PRKDC-206ENST00000536429 ZNF285Q96NJ3 590 aa12.62□□□□□ -0.39
PRKDC-206ENST00000536429 GBP5Q96PP8 586 aa12.62□□□□□ -0.39
PRKDC-206ENST00000536429 DPH7Q9BTV6 452 aa12.62□□□□□ -0.39
PRKDC-206ENST00000536429 SLC7A5P2Q9GIP4 190 aa12.62□□□□□ -0.39
PRKDC-206ENST00000536429 ZDHHC18Q9NUE0 388 aa12.62□□□□□ -0.39
PRKDC-206ENST00000536429 INTS7Q9NVH2 962 aaKnown RBP12.62□□□□□ -0.39
PRKDC-206ENST00000536429 CUEDC1Q9NWM3 386 aaPredicted RBP12.62□□□□□ -0.39
PRKDC-206ENST00000536429 STOX2Q9P2F5 926 aaPredicted RBP12.62□□□□□ -0.39
PRKDC-206ENST00000536429 CORO1CQ9ULV4 474 aaPredicted RBP12.62□□□□□ -0.39
PRKDC-206ENST00000536429 SH2B3Q9UQQ2 575 aa12.62□□□□□ -0.39
PRKDC-206ENST00000536429 SPTA1P02549 2419 aa12.62□□□□□ -0.39
PRKDC-206ENST00000536429 FASNP49327 2511 aaKnown RBP12.61□□□□□ -0.39
PRKDC-206ENST00000536429 FAM159BA6NKW6 160 aa12.61□□□□□ -0.39
PRKDC-206ENST00000536429 EIF4E1BA6NMX2 242 aaKnown RBP12.61□□□□□ -0.39
PRKDC-206ENST00000536429 TARM1B6A8C7 271 aa12.61□□□□□ -0.39
PRKDC-206ENST00000536429 TK2O00142 265 aa12.61□□□□□ -0.39
PRKDC-206ENST00000536429 CNOT3O75175 753 aaKnown RBP12.61□□□□□ -0.39
PRKDC-206ENST00000536429 FKBP9O95302 570 aa12.61□□□□□ -0.39
PRKDC-206ENST00000536429 CMPK1P30085 196 aa12.61□□□□□ -0.39
PRKDC-206ENST00000536429 MAGEA4P43358 317 aa12.61□□□□□ -0.39
PRKDC-206ENST00000536429 VSX2P58304 361 aaPredicted RBP12.61□□□□□ -0.39
PRKDC-206ENST00000536429 IL2P60568 153 aa12.61□□□□□ -0.39
PRKDC-206ENST00000536429 MC1RQ01726 317 aa12.61□□□□□ -0.39
PRKDC-206ENST00000536429 GUCY2DQ02846 1103 aa12.61□□□□□ -0.39
PRKDC-206ENST00000536429 EFTUD2Q15029 972 aaKnown RBP eCLIP12.61□□□□□ -0.39
PRKDC-206ENST00000536429 ICE2Q659A1 982 aa12.61□□□□□ -0.39
PRKDC-206ENST00000536429 RHBDD2Q6NTF9 364 aa12.61□□□□□ -0.39
PRKDC-206ENST00000536429 C3orf62Q6ZUJ4 267 aa12.61□□□□□ -0.39
PRKDC-206ENST00000536429 RNF44Q7L0R7 432 aa12.61□□□□□ -0.39
PRKDC-206ENST00000536429 PAQR7Q86WK9 346 aa12.61□□□□□ -0.39
PRKDC-206ENST00000536429 PLD3Q8IV08 490 aa12.61□□□□□ -0.39
PRKDC-206ENST00000536429 ANKRD49Q8WVL7 239 aa12.61□□□□□ -0.39
PRKDC-206ENST00000536429 SEC14L1Q92503 715 aa12.61□□□□□ -0.39
PRKDC-206ENST00000536429 VPS39Q96JC1 886 aa12.61□□□□□ -0.39
PRKDC-206ENST00000536429 SELENOSQ9BQE4 189 aa12.61□□□□□ -0.39
PRKDC-206ENST00000536429 PLCD4Q9BRC7 762 aa12.61□□□□□ -0.39
PRKDC-206ENST00000536429 ARHGAP9Q9BRR9 750 aa12.61□□□□□ -0.39
PRKDC-206ENST00000536429 GPR87Q9BY21 358 aa12.61□□□□□ -0.39
PRKDC-206ENST00000536429 RHOJQ9H4E5 214 aa12.61□□□□□ -0.39
PRKDC-206ENST00000536429 CAB39LQ9H9S4 337 aa12.61□□□□□ -0.39
PRKDC-206ENST00000536429 PARVBQ9HBI1 364 aa12.61□□□□□ -0.39
PRKDC-206ENST00000536429 LRRC4CQ9HCJ2 640 aa12.61□□□□□ -0.39
PRKDC-206ENST00000536429 MRPS30Q9NP92 439 aaKnown RBP12.61□□□□□ -0.39
PRKDC-206ENST00000536429 SLC22A11Q9NSA0 550 aa12.61□□□□□ -0.39
PRKDC-206ENST00000536429 DMGDHQ9UI17 866 aaKnown RBP12.61□□□□□ -0.39
PRKDC-206ENST00000536429 MTO1Q9Y2Z2 717 aaKnown RBP12.61□□□□□ -0.39
PRKDC-206ENST00000536429 AP1M2Q9Y6Q5 423 aa12.61□□□□□ -0.39
PRKDC-206ENST00000536429 ZNF462Q96JM2 2506 aa12.61□□□□□ -0.39
PRKDC-206ENST00000536429 SLC16A5O15375 505 aa12.6□□□□□ -0.39
PRKDC-206ENST00000536429 FAM155BO75949 473 aa12.6□□□□□ -0.39
PRKDC-206ENST00000536429 C8GP07360 202 aa12.6□□□□□ -0.39
PRKDC-206ENST00000536429 ZNF37AP17032 561 aaPredicted RBP12.6□□□□□ -0.39
PRKDC-206ENST00000536429 GMPRP36959 345 aa12.6□□□□□ -0.39
PRKDC-206ENST00000536429 HSD17B2P37059 387 aa12.6□□□□□ -0.39
PRKDC-206ENST00000536429 POLE2P56282 527 aa12.6□□□□□ -0.39
PRKDC-206ENST00000536429 TBPL1P62380 186 aa12.6□□□□□ -0.39
PRKDC-206ENST00000536429 RPS15P62841 145 aaKnown RBP12.6□□□□□ -0.39
PRKDC-206ENST00000536429 CAV1Q03135 178 aa12.6□□□□□ -0.39
PRKDC-206ENST00000536429 PRDX1Q06830 199 aaKnown RBP12.6□□□□□ -0.39
PRKDC-206ENST00000536429 SP140Q13342 867 aa12.6□□□□□ -0.39
PRKDC-206ENST00000536429 NCF4Q15080 339 aa12.6□□□□□ -0.39
PRKDC-206ENST00000536429 CRTC2Q53ET0 693 aaPredicted RBP12.6□□□□□ -0.39
PRKDC-206ENST00000536429 ZC3H12BQ5HYM0 836 aaKnown RBP12.6□□□□□ -0.39
PRKDC-206ENST00000536429 WASHC2DQ5SRD0 308 aa12.6□□□□□ -0.39
PRKDC-206ENST00000536429 ZNF425Q6IV72 752 aa12.6□□□□□ -0.39
PRKDC-206ENST00000536429 LRRC8EQ6NSJ5 796 aa12.6□□□□□ -0.39
PRKDC-206ENST00000536429 TLDC1Q6P9B6 456 aa12.6□□□□□ -0.39
PRKDC-206ENST00000536429 AGTRAPQ6RW13 159 aa12.6□□□□□ -0.39
PRKDC-206ENST00000536429 TTLL10Q6ZVT0 673 aa12.6□□□□□ -0.39
PRKDC-206ENST00000536429 MMGT1Q8N4V1 131 aa12.6□□□□□ -0.39
PRKDC-206ENST00000536429 METTL27Q8N6F8 245 aaPredicted RBP12.6□□□□□ -0.39
PRKDC-206ENST00000536429 MCOLN3Q8TDD5 553 aa12.6□□□□□ -0.39
PRKDC-206ENST00000536429 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.6□□□□□ -0.39
PRKDC-206ENST00000536429 MED8Q96G25 268 aa12.6□□□□□ -0.39
PRKDC-206ENST00000536429 CCDC138Q96M89 665 aa12.6□□□□□ -0.39
PRKDC-206ENST00000536429 CATSPER2Q96P56 530 aa12.6□□□□□ -0.39
PRKDC-206ENST00000536429 NDC1Q9BTX1 674 aa12.6□□□□□ -0.39
PRKDC-206ENST00000536429 NLNQ9BYT8 704 aa12.6□□□□□ -0.39
PRKDC-206ENST00000536429 UNKQ9C0B0 810 aaKnown RBP12.6□□□□□ -0.39
PRKDC-206ENST00000536429 PHACTR1Q9C0D0 580 aa12.6□□□□□ -0.39
PRKDC-206ENST00000536429 ATG10Q9H0Y0 220 aa12.6□□□□□ -0.39
PRKDC-206ENST00000536429 TCFL5Q9UL49 500 aa12.6□□□□□ -0.39
PRKDC-206ENST00000536429 FER1L5A0AVI2 2057 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 FITM1A5D6W6 292 aa12.59□□□□□ -0.39
PRKDC-206ENST00000536429 NPEPPSL1A6NEC2 478 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms