RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 RASSF5Q8WWW0 418 aa17.47■□□□□ 0.39
RAB40C-203ENST00000535977 NTMT1Q9BV86 223 aa17.47■□□□□ 0.39
RAB40C-203ENST00000535977 TRIM39Q9HCM9 518 aa17.47■□□□□ 0.39
RAB40C-203ENST00000535977 IL26Q9NPH9 171 aa17.47■□□□□ 0.39
RAB40C-203ENST00000535977 NECTIN3Q9NQS3 549 aa17.47■□□□□ 0.39
RAB40C-203ENST00000535977 INTS7Q9NVH2 962 aaKnown RBP17.47■□□□□ 0.39
RAB40C-203ENST00000535977 ASIC5Q9NY37 505 aa17.47■□□□□ 0.39
RAB40C-203ENST00000535977 ANKRD28O15084 1053 aa17.47■□□□□ 0.39
RAB40C-203ENST00000535977 GREM1O60565 184 aa17.47■□□□□ 0.39
RAB40C-203ENST00000535977 PRAMEF12O95522 483 aa17.47■□□□□ 0.39
RAB40C-203ENST00000535977 EBLN1P0CF75 366 aa17.47■□□□□ 0.39
RAB40C-203ENST00000535977 AKT1P31749 480 aa17.47■□□□□ 0.39
RAB40C-203ENST00000535977 NCS1P62166 190 aa17.47■□□□□ 0.39
RAB40C-203ENST00000535977 C19orf57Q0VDD7 668 aa17.47■□□□□ 0.39
RAB40C-203ENST00000535977 NPTX1Q15818 432 aa17.47■□□□□ 0.39
RAB40C-203ENST00000535977 ZNF181Q2M3W8 571 aa17.47■□□□□ 0.39
RAB40C-203ENST00000535977 GPRC6AQ5T6X5 926 aa17.47■□□□□ 0.39
RAB40C-203ENST00000535977 AGAP6Q5VW22 663 aa17.47■□□□□ 0.39
RAB40C-203ENST00000535977 CCBE1Q6UXH8 406 aaPredicted RBP17.47■□□□□ 0.39
RAB40C-203ENST00000535977 PAF1Q8N7H5 531 aa17.47■□□□□ 0.39
RAB40C-203ENST00000535977 TMEM74Q96NL1 305 aa17.47■□□□□ 0.39
RAB40C-203ENST00000535977 AGAP4Q96P64 663 aa17.47■□□□□ 0.39
RAB40C-203ENST00000535977 SLIRPQ9GZT3 109 aaKnown RBP17.47■□□□□ 0.39
RAB40C-203ENST00000535977 TRPS1Q9UHF7 1281 aa17.47■□□□□ 0.39
RAB40C-203ENST00000535977 CRLS1Q9UJA2 301 aa17.47■□□□□ 0.39
RAB40C-203ENST00000535977 CAB39Q9Y376 341 aaPredicted RBP17.47■□□□□ 0.39
RAB40C-203ENST00000535977 MAGED1Q9Y5V3 778 aaPredicted RBP17.47■□□□□ 0.39
RAB40C-203ENST00000535977 ANAPC1Q9H1A4 1944 aa17.47■□□□□ 0.39
RAB40C-203ENST00000535977 MKI67P46013 3256 aaKnown RBP17.47■□□□□ 0.39
RAB40C-203ENST00000535977 GLYATL1P3A0A0U1RQE8 302 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 PTGES3LE9PB15 166 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 TMCC2O75069 709 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 IGSF6O95976 241 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 HOXB6P17509 224 aaKnown RBP17.46■□□□□ 0.39
RAB40C-203ENST00000535977 SPAM1P38567 509 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 ARSFP54793 590 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 PRMT2P55345 433 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 CTU2Q2VPK5 515 aaKnown RBP17.46■□□□□ 0.39
RAB40C-203ENST00000535977 TRIM46Q7Z4K8 759 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 TMEM150AQ86TG1 271 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 CPXM2Q8N436 756 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 SIMC1Q8NDZ2 872 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 IL17RDQ8NFM7 739 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 SEPHS2Q99611 448 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 EGFL8Q99944 293 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 PLSCR3Q9NRY6 295 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 WWOXQ9NZC7 414 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 SLAMF8Q9P0V8 285 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 SPEF1Q9Y4P9 236 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 CCL27Q9Y4X3 112 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 TET1Q8NFU7 2136 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 ZFC3H1O60293 1989 aaKnown RBP17.46■□□□□ 0.39
RAB40C-203ENST00000535977 TAPBPO15533 448 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 PTTG1O95997 202 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 THRBP10828 461 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 SLC2A4P14672 509 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 HSPA7P48741 367 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 HTR6P50406 440 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 GABARAPL2P60520 117 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 ABRAXAS2Q15018 415 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 CDKN3Q16667 212 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 FAM98BQ52LJ0 330 aaKnown RBP17.46■□□□□ 0.39
RAB40C-203ENST00000535977 COLEC12Q5KU26 742 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 CACHD1Q5VU97 1274 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 GET4Q7L5D6 327 aaPredicted RBP17.46■□□□□ 0.39
RAB40C-203ENST00000535977 GALNT12Q8IXK2 581 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 BPIFB1Q8TDL5 484 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 TMEM169Q96HH4 297 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 CCDC115Q96NT0 180 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 NODALQ96S42 347 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 LYSMD1Q96S90 227 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 SLC29A3Q9BZD2 475 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 TM6SF2Q9BZW4 377 aa17.46■□□□□ 0.39
RAB40C-203ENST00000535977 NSUN3Q9H649 340 aaKnown RBP17.46■□□□□ 0.39
RAB40C-203ENST00000535977 PAK1IP1Q9NWT1 392 aaPredicted RBP17.46■□□□□ 0.39
RAB40C-203ENST00000535977 EVLQ9UI08 416 aaPredicted RBP17.46■□□□□ 0.39
RAB40C-203ENST00000535977 TRIM16O95361 564 aa17.45■□□□□ 0.38
RAB40C-203ENST00000535977 IL6P05231 212 aa17.45■□□□□ 0.38
RAB40C-203ENST00000535977 ANXA6P08133 673 aa17.45■□□□□ 0.38
RAB40C-203ENST00000535977 CNPP09543 421 aaKnown RBP17.45■□□□□ 0.38
RAB40C-203ENST00000535977 TCF3P15923 654 aa17.45■□□□□ 0.38
RAB40C-203ENST00000535977 HRH2P25021 359 aa17.45■□□□□ 0.38
RAB40C-203ENST00000535977 GRK3P35626 688 aa17.45■□□□□ 0.38
RAB40C-203ENST00000535977 TPD52P55327 224 aaPredicted RBP17.45■□□□□ 0.38
RAB40C-203ENST00000535977 SVOPQ8N4V2 548 aa17.45■□□□□ 0.38
RAB40C-203ENST00000535977 ADAMTS19Q8TE59 1207 aa17.45■□□□□ 0.38
RAB40C-203ENST00000535977 FAR1Q8WVX9 515 aa17.45■□□□□ 0.38
RAB40C-203ENST00000535977 RHBDF1Q96CC6 855 aa17.45■□□□□ 0.38
RAB40C-203ENST00000535977 ACTL8Q9H568 366 aa17.45■□□□□ 0.38
RAB40C-203ENST00000535977 GORASP2Q9H8Y8 452 aa17.45■□□□□ 0.38
RAB40C-203ENST00000535977 KCTD5Q9NXV2 234 aa17.45■□□□□ 0.38
RAB40C-203ENST00000535977 ULK1O75385 1050 aa17.45■□□□□ 0.38
RAB40C-203ENST00000535977 KATNA1O75449 491 aa17.45■□□□□ 0.38
RAB40C-203ENST00000535977 DNAJB5O75953 348 aa17.45■□□□□ 0.38
RAB40C-203ENST00000535977 RAP2AP10114 183 aa17.45■□□□□ 0.38
RAB40C-203ENST00000535977 GTF2E2P29084 291 aaKnown RBP17.45■□□□□ 0.38
RAB40C-203ENST00000535977 SERPINA4P29622 427 aa17.45■□□□□ 0.38
RAB40C-203ENST00000535977 GNPDA1P46926 289 aa17.45■□□□□ 0.38
RAB40C-203ENST00000535977 ALDH3A2P51648 485 aa17.45■□□□□ 0.38
RAB40C-203ENST00000535977 ZFP69Q49AA0 526 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms