RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 ANKRD46Q86W74 232 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 PHACTR4Q8IZ21 702 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 AADATQ8N5Z0 425 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 FIG4Q92562 907 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 GLMNQ92990 594 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 GFM2Q969S9 779 aaKnown RBP12.98□□□□□ -0.33
VPS33B-202ENST00000535906 DTD2Q96FN9 168 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 AURKBQ96GD4 344 aaPredicted RBP12.98□□□□□ -0.33
VPS33B-202ENST00000535906 COQ10AQ96MF6 247 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 OR4K3Q96R72 315 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 TBCDQ9BTW9 1192 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 PAIP1Q9H074 479 aaKnown RBP12.98□□□□□ -0.33
VPS33B-202ENST00000535906 HPS4Q9NQG7 708 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 STOX2Q9P2F5 926 aaPredicted RBP12.98□□□□□ -0.33
VPS33B-202ENST00000535906 NPIPB8E9PQR5 432 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 H0YAE9 185 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 ZNF701M0R085 212 aaPredicted RBP12.97□□□□□ -0.33
VPS33B-202ENST00000535906 NPC1O15118 1278 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 PRSS23O95084 383 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 SNAP29O95721 258 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 SLC16A8O95907 504 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 RAP2AP10114 183 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 CDK4P11802 303 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 RPS6KA3P51812 740 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 ADARB1P78563 741 aaKnown RBP12.97□□□□□ -0.33
VPS33B-202ENST00000535906 NAE1Q13564 534 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 KCNC3Q14003 757 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 XKR6Q5GH73 641 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 LIPJQ5W064 366 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 NRSN1Q8IZ57 195 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 C10orf111Q8N326 155 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 FAM86B1Q8N7N1 296 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 ARRDC3Q96B67 414 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 MED8Q96G25 268 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 CCDC115Q96NT0 180 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 INPP5KQ9BT40 448 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 CARS2Q9HA77 564 aaKnown RBP12.97□□□□□ -0.33
VPS33B-202ENST00000535906 NTN4Q9HB63 628 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 SERTM1A2A2V5 107 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 PSMD11O00231 422 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 DEAF1O75398 565 aaPredicted RBP12.97□□□□□ -0.33
VPS33B-202ENST00000535906 PRNPP04156 253 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 GSNP06396 782 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 S100A3P33764 101 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 DOC2AQ14183 400 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 PGS1Q32NB8 556 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 FAM98BQ52LJ0 330 aaKnown RBP12.97□□□□□ -0.33
VPS33B-202ENST00000535906 FNDC3BQ53EP0 1204 aaKnown RBP12.97□□□□□ -0.33
VPS33B-202ENST00000535906 FAM109BQ6ICB4 259 aaPredicted RBP12.97□□□□□ -0.33
VPS33B-202ENST00000535906 NOXRED1Q6NXP6 359 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 TBPL2Q6SJ96 375 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 GCNT7Q6ZNI0 430 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 NLRP8Q86W28 1048 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 OFCC1Q8IZS5 231 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 WDR20Q8TBZ3 569 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 CCDC138Q96M89 665 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 MTERF1Q99551 399 aaKnown RBP12.97□□□□□ -0.33
VPS33B-202ENST00000535906 EBPLQ9BY08 206 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 YTHDF1Q9BYJ9 559 aaKnown RBP12.97□□□□□ -0.33
VPS33B-202ENST00000535906 KAT8Q9H7Z6 458 aaKnown RBP12.97□□□□□ -0.33
VPS33B-202ENST00000535906 GORASP2Q9H8Y8 452 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 INVSQ9Y283 1065 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 TMED5Q9Y3A6 229 aa12.97□□□□□ -0.33
VPS33B-202ENST00000535906 NUP214P35658 2090 aaPredicted RBP12.96□□□□□ -0.33
VPS33B-202ENST00000535906 ANTXRLA6NF34 631 aa12.96□□□□□ -0.33
VPS33B-202ENST00000535906 H0Y858 1186 aa12.96□□□□□ -0.33
VPS33B-202ENST00000535906 UPK1AO00322 258 aa12.96□□□□□ -0.33
VPS33B-202ENST00000535906 UGDHO60701 494 aa12.96□□□□□ -0.33
VPS33B-202ENST00000535906 GMNNO75496 209 aa12.96□□□□□ -0.33
VPS33B-202ENST00000535906 RECQL5O94762 991 aaPredicted RBP12.96□□□□□ -0.33
VPS33B-202ENST00000535906 RB1P06400 928 aa12.96□□□□□ -0.33
VPS33B-202ENST00000535906 CA3P07451 260 aa12.96□□□□□ -0.33
VPS33B-202ENST00000535906 PCNAP12004 261 aa12.96□□□□□ -0.33
VPS33B-202ENST00000535906 IMPA1P29218 277 aa12.96□□□□□ -0.33
VPS33B-202ENST00000535906 PTPN6P29350 595 aa12.96□□□□□ -0.33
VPS33B-202ENST00000535906 CDKN2CP42773 168 aa12.96□□□□□ -0.33
VPS33B-202ENST00000535906 HNRNPA1L2Q32P51 320 aaKnown RBP12.96□□□□□ -0.33
VPS33B-202ENST00000535906 ZNF658BQ4V348 819 aaPredicted RBP12.96□□□□□ -0.33
VPS33B-202ENST00000535906 LRIF1Q5T3J3 769 aa12.96□□□□□ -0.33
VPS33B-202ENST00000535906 NPAS3Q8IXF0 933 aa12.96□□□□□ -0.33
VPS33B-202ENST00000535906 C7orf61Q8IZ16 206 aa12.96□□□□□ -0.33
VPS33B-202ENST00000535906 TESCQ96BS2 214 aa12.96□□□□□ -0.33
VPS33B-202ENST00000535906 ERLEC1Q96DZ1 483 aa12.96□□□□□ -0.33
VPS33B-202ENST00000535906 ASB16Q96NS5 453 aa12.96□□□□□ -0.33
VPS33B-202ENST00000535906 PKP4Q99569 1192 aa12.96□□□□□ -0.33
VPS33B-202ENST00000535906 NPLQ9BXD5 320 aaPredicted RBP12.96□□□□□ -0.33
VPS33B-202ENST00000535906 KCNH6Q9H252 994 aa12.96□□□□□ -0.33
VPS33B-202ENST00000535906 DPP7Q9UHL4 492 aa12.96□□□□□ -0.33
VPS33B-202ENST00000535906 MAN2B2Q9Y2E5 1009 aa12.96□□□□□ -0.33
VPS33B-202ENST00000535906 C2orf16Q68DN1 1984 aa12.96□□□□□ -0.34
VPS33B-202ENST00000535906 ELOVL7A1L3X0 281 aa12.96□□□□□ -0.34
VPS33B-202ENST00000535906 GSTA4O15217 222 aa12.96□□□□□ -0.34
VPS33B-202ENST00000535906 ERN1O75460 977 aaKnown RBP12.96□□□□□ -0.34
VPS33B-202ENST00000535906 CATP04040 527 aaKnown RBP12.96□□□□□ -0.34
VPS33B-202ENST00000535906 POU2F2P09086 479 aa12.96□□□□□ -0.34
VPS33B-202ENST00000535906 HOXB9P17482 250 aaPredicted RBP12.96□□□□□ -0.34
VPS33B-202ENST00000535906 ITGB7P26010 798 aa12.96□□□□□ -0.34
VPS33B-202ENST00000535906 MAPK1P28482 360 aa12.96□□□□□ -0.34
VPS33B-202ENST00000535906 ALDH3A2P51648 485 aa12.96□□□□□ -0.34
VPS33B-202ENST00000535906 ARSFP54793 590 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms