RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 CTSVO60911 334 aa21.82■■□□□ 1.08
SFSWAP-204ENST00000535399 CCNDBP1O95273 360 aa21.82■■□□□ 1.08
SFSWAP-204ENST00000535399 SLC35E2BP0CK96 405 aa21.82■■□□□ 1.08
SFSWAP-204ENST00000535399 CRABP2P29373 138 aa21.82■■□□□ 1.08
SFSWAP-204ENST00000535399 CSRP3P50461 194 aa21.82■■□□□ 1.08
SFSWAP-204ENST00000535399 ABHD18Q0P651 414 aa21.82■■□□□ 1.08
SFSWAP-204ENST00000535399 NAE1Q13564 534 aa21.82■■□□□ 1.08
SFSWAP-204ENST00000535399 COL28A1Q2UY09 1125 aa21.82■■□□□ 1.08
SFSWAP-204ENST00000535399 MANEAQ5SRI9 462 aa21.82■■□□□ 1.08
SFSWAP-204ENST00000535399 ADAMTSL2Q86TH1 951 aa21.82■■□□□ 1.08
SFSWAP-204ENST00000535399 IL22RA1Q8N6P7 574 aa21.82■■□□□ 1.08
SFSWAP-204ENST00000535399 SLC38A9Q8NBW4 561 aa21.82■■□□□ 1.08
SFSWAP-204ENST00000535399 N4BP2L2Q92802 583 aaPredicted RBP21.82■■□□□ 1.08
SFSWAP-204ENST00000535399 PAFAH2Q99487 392 aa21.82■■□□□ 1.08
SFSWAP-204ENST00000535399 DPH7Q9BTV6 452 aa21.82■■□□□ 1.08
SFSWAP-204ENST00000535399 SGPP1Q9BX95 441 aa21.82■■□□□ 1.08
SFSWAP-204ENST00000535399 ATG10Q9H0Y0 220 aa21.82■■□□□ 1.08
SFSWAP-204ENST00000535399 CCDC177Q9NQR7 707 aaPredicted RBP21.82■■□□□ 1.08
SFSWAP-204ENST00000535399 ABCF3Q9NUQ8 709 aa21.82■■□□□ 1.08
SFSWAP-204ENST00000535399 UTP6Q9NYH9 597 aaKnown RBP21.82■■□□□ 1.08
SFSWAP-204ENST00000535399 EURLQ9NYK6 297 aa21.82■■□□□ 1.08
SFSWAP-204ENST00000535399 OARD1Q9Y530 152 aa21.82■■□□□ 1.08
SFSWAP-204ENST00000535399 PCDHB3Q9Y5E6 796 aa21.82■■□□□ 1.08
SFSWAP-204ENST00000535399 SNRNP200O75643 2136 aaKnown RBP21.82■■□□□ 1.08
SFSWAP-204ENST00000535399 CPNE3O75131 537 aaKnown RBP21.81■■□□□ 1.08
SFSWAP-204ENST00000535399 SLU7O95391 586 aaKnown RBP21.81■■□□□ 1.08
SFSWAP-204ENST00000535399 GUCA1CO95843 209 aa21.81■■□□□ 1.08
SFSWAP-204ENST00000535399 INHBAP08476 426 aa21.81■■□□□ 1.08
SFSWAP-204ENST00000535399 CD1DP15813 335 aa21.81■■□□□ 1.08
SFSWAP-204ENST00000535399 WT1P19544 449 aaPredicted RBP21.81■■□□□ 1.08
SFSWAP-204ENST00000535399 STAT5AP42229 794 aa21.81■■□□□ 1.08
SFSWAP-204ENST00000535399 UCNP55089 124 aa21.81■■□□□ 1.08
SFSWAP-204ENST00000535399 ABATP80404 500 aa21.81■■□□□ 1.08
SFSWAP-204ENST00000535399 NAA25Q14CX7 972 aa21.81■■□□□ 1.08
SFSWAP-204ENST00000535399 ZNF425Q6IV72 752 aa21.81■■□□□ 1.08
SFSWAP-204ENST00000535399 OR56A3Q8NH54 315 aa21.81■■□□□ 1.08
SFSWAP-204ENST00000535399 PLCD4Q9BRC7 762 aa21.81■■□□□ 1.08
SFSWAP-204ENST00000535399 SPRTNQ9H040 489 aaPredicted RBP21.81■■□□□ 1.08
SFSWAP-204ENST00000535399 EPB41L4BQ9H329 900 aa21.81■■□□□ 1.08
SFSWAP-204ENST00000535399 CPNE5Q9HCH3 593 aa21.81■■□□□ 1.08
SFSWAP-204ENST00000535399 ANKMY1Q9P2S6 941 aa21.81■■□□□ 1.08
SFSWAP-204ENST00000535399 LOC101059948A0A1B0GTJ6 334 aa21.8■■□□□ 1.08
SFSWAP-204ENST00000535399 PABPN1LA6NDY0 278 aaKnown RBP21.8■■□□□ 1.08
SFSWAP-204ENST00000535399 E7EQ34 232 aa21.8■■□□□ 1.08
SFSWAP-204ENST00000535399 OR2B3O76000 313 aa21.8■■□□□ 1.08
SFSWAP-204ENST00000535399 MT-ND3P03897 115 aa21.8■■□□□ 1.08
SFSWAP-204ENST00000535399 TMPRSS3P57727 454 aa21.8■■□□□ 1.08
SFSWAP-204ENST00000535399 ATP6V0D1P61421 351 aa21.8■■□□□ 1.08
SFSWAP-204ENST00000535399 CDKL1Q00532 357 aa21.8■■□□□ 1.08
SFSWAP-204ENST00000535399 DLG1Q12959 904 aa21.8■■□□□ 1.08
SFSWAP-204ENST00000535399 CSHL1Q14406 222 aa21.8■■□□□ 1.08
SFSWAP-204ENST00000535399 ZC3H12BQ5HYM0 836 aaKnown RBP21.8■■□□□ 1.08
SFSWAP-204ENST00000535399 THEMIS2Q5TEJ8 643 aa21.8■■□□□ 1.08
SFSWAP-204ENST00000535399 PRAMEF13Q5VWM6 474 aa21.8■■□□□ 1.08
SFSWAP-204ENST00000535399 FBXO42Q6P3S6 717 aa21.8■■□□□ 1.08
SFSWAP-204ENST00000535399 RAPH1Q70E73 1250 aa21.8■■□□□ 1.08
SFSWAP-204ENST00000535399 RNF44Q7L0R7 432 aa21.8■■□□□ 1.08
SFSWAP-204ENST00000535399 PAQR7Q86WK9 346 aa21.8■■□□□ 1.08
SFSWAP-204ENST00000535399 GPR135Q8IZ08 494 aa21.8■■□□□ 1.08
SFSWAP-204ENST00000535399 DCAKDQ8WVC6 231 aa21.8■■□□□ 1.08
SFSWAP-204ENST00000535399 ATL1Q8WXF7 558 aa21.8■■□□□ 1.08
SFSWAP-204ENST00000535399 PTERQ96BW5 349 aa21.8■■□□□ 1.08
SFSWAP-204ENST00000535399 MED8Q96G25 268 aa21.8■■□□□ 1.08
SFSWAP-204ENST00000535399 LRFN5Q96NI6 719 aa21.8■■□□□ 1.08
SFSWAP-204ENST00000535399 ZNF285Q96NJ3 590 aa21.8■■□□□ 1.08
SFSWAP-204ENST00000535399 PCBD2Q9H0N5 130 aa21.8■■□□□ 1.08
SFSWAP-204ENST00000535399 PRORYQ9H606 182 aa21.8■■□□□ 1.08
SFSWAP-204ENST00000535399 AKIRIN1Q9H9L7 192 aaPredicted RBP21.8■■□□□ 1.08
SFSWAP-204ENST00000535399 SNX15Q9NRS6 342 aa21.8■■□□□ 1.08
SFSWAP-204ENST00000535399 ZNF749O43361 778 aa21.79■■□□□ 1.08
SFSWAP-204ENST00000535399 LIFP15018 202 aa21.79■■□□□ 1.08
SFSWAP-204ENST00000535399 RORAP35398 523 aa21.79■■□□□ 1.08
SFSWAP-204ENST00000535399 GPS2Q13227 327 aa21.79■■□□□ 1.08
SFSWAP-204ENST00000535399 OR4D1Q15615 310 aa21.79■■□□□ 1.08
SFSWAP-204ENST00000535399 KIAA1191Q96A73 305 aa21.79■■□□□ 1.08
SFSWAP-204ENST00000535399 ACTR5Q9H9F9 607 aaPredicted RBP21.79■■□□□ 1.08
SFSWAP-204ENST00000535399 LHX9Q9NQ69 397 aa21.79■■□□□ 1.08
SFSWAP-204ENST00000535399 ENAMQ9NRM1 1142 aa21.79■■□□□ 1.08
SFSWAP-204ENST00000535399 IGSF5Q9NSI5 407 aa21.79■■□□□ 1.08
SFSWAP-204ENST00000535399 CUEDC1Q9NWM3 386 aaPredicted RBP21.79■■□□□ 1.08
SFSWAP-204ENST00000535399 ZNF180Q9UJW8 692 aa21.79■■□□□ 1.08
SFSWAP-204ENST00000535399 PADI1Q9ULC6 663 aa21.79■■□□□ 1.08
SFSWAP-204ENST00000535399 SH2B3Q9UQQ2 575 aa21.79■■□□□ 1.08
SFSWAP-204ENST00000535399 SPTBP11277 2137 aa21.79■■□□□ 1.08
SFSWAP-204ENST00000535399 POC1B-GALNT4F8VUJ3 575 aa21.78■■□□□ 1.08
SFSWAP-204ENST00000535399 K7ENP7 123 aa21.78■■□□□ 1.08
SFSWAP-204ENST00000535399 TERTO14746 1132 aaKnown RBP21.78■■□□□ 1.08
SFSWAP-204ENST00000535399 ZSCAN9O15535 394 aaPredicted RBP21.78■■□□□ 1.08
SFSWAP-204ENST00000535399 ALDOAP04075 364 aaKnown RBP21.78■■□□□ 1.08
SFSWAP-204ENST00000535399 C2P06681 752 aa21.78■■□□□ 1.08
SFSWAP-204ENST00000535399 CCND1P24385 295 aa21.78■■□□□ 1.08
SFSWAP-204ENST00000535399 SLC26A3P40879 764 aa21.78■■□□□ 1.08
SFSWAP-204ENST00000535399 MSH2P43246 934 aa21.78■■□□□ 1.08
SFSWAP-204ENST00000535399 SERPINB9P50453 376 aa21.78■■□□□ 1.08
SFSWAP-204ENST00000535399 CAPN13Q6MZZ7 669 aaPredicted RBP21.78■■□□□ 1.08
SFSWAP-204ENST00000535399 TLDC1Q6P9B6 456 aa21.78■■□□□ 1.08
SFSWAP-204ENST00000535399 INO80CQ6PI98 192 aaPredicted RBP21.78■■□□□ 1.08
SFSWAP-204ENST00000535399 CCDC91Q7Z6B0 441 aa21.78■■□□□ 1.08
SFSWAP-204ENST00000535399 ZNF655Q8N720 491 aaPredicted RBP21.78■■□□□ 1.08
SFSWAP-204ENST00000535399 ISL2Q96A47 359 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms