RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 TRMT13Q9NUP7 481 aaKnown RBP4.29□□□□□ -1.72
CTSC-208ENST00000533897 C3orf18Q9UK00 162 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 A0A1B0GVM2 712 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 SLC35F4A4IF30 521 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 TAF4O00268 1085 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 SEPT4O43236 478 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 RGS14O43566 566 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 NUAK1O60285 661 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 SEMA7AO75326 666 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 NDUFS3O75489 264 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 TNFRSF21O75509 655 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 SEC24AO95486 1093 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 TP53P04637 393 aaPredicted RBP4.29□□□□□ -1.72
CTSC-208ENST00000533897 PABPC1P11940 636 aaKnown RBP4.29□□□□□ -1.72
CTSC-208ENST00000533897 MZF1P28698 734 aaPredicted RBP4.29□□□□□ -1.72
CTSC-208ENST00000533897 THPOP40225 353 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 CRISP3P54108 245 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 GAS1P54826 345 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 PTPN5P54829 565 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 VBP1P61758 197 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 PRKCDQ05655 676 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 ITKQ08881 620 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 ZNF235Q14590 738 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 NPTX1Q15818 432 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 MAPKAPK3Q16644 382 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 MPEG1Q2M385 716 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 TMEM236Q5W0B7 351 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 OR2T5Q6IEZ7 315 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 CCDC190Q86UF4 302 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 SERPINA9Q86WD7 417 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 LAS2Q8IYD9 372 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 ADGRG2Q8IZP9 1017 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 DNAJC22Q8N4W6 341 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 NAT16Q8N8M0 369 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 OR2T29Q8NH02 315 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 ASB11Q8WXH4 323 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 FIG4Q92562 907 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 RNF170Q96K19 258 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 EXOC2Q96KP1 924 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 DHRS1Q96LJ7 313 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 HTATIP2Q9BUP3 242 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 SLC12A9Q9BXP2 914 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 CIPCQ9C0C6 399 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 MCOLN1Q9GZU1 580 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 EPS8L2Q9H6S3 715 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 SLC25A19Q9HC21 320 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 BPIFA1Q9NP55 256 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 KCND3Q9UK17 655 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 SLC6A14Q9UN76 642 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 EIF3LQ9Y262 564 aaKnown RBP4.29□□□□□ -1.72
CTSC-208ENST00000533897 TRAPPC4Q9Y296 219 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 TMED5Q9Y3A6 229 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 CFAP20Q9Y6A4 193 aaKnown RBP4.29□□□□□ -1.72
CTSC-208ENST00000533897 V9GYQ6 96 aa4.29□□□□□ -1.72
CTSC-208ENST00000533897 ISPDA4D126 451 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 TRIM43BA6NCK2 446 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 ARRDC5A6NEK1 342 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 AGAP5A6NIR3 686 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 F5H5T6 163 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 SNX4O95219 450 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 CHEK2O96017 543 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 ALOX5P09917 674 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 FPR1P21462 350 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 MAP4P27816 1152 aaKnown RBP4.28□□□□□ -1.72
CTSC-208ENST00000533897 DNAJA1P31689 397 aaKnown RBP4.28□□□□□ -1.72
CTSC-208ENST00000533897 ALDH7A1P49419 539 aaKnown RBP4.28□□□□□ -1.72
CTSC-208ENST00000533897 PCBP3P57721 371 aaKnown RBP4.28□□□□□ -1.72
CTSC-208ENST00000533897 FPGSQ05932 587 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 PPP1R8Q12972 351 aaKnown RBP4.28□□□□□ -1.72
CTSC-208ENST00000533897 ITGADQ13349 1161 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 PDE7AQ13946 482 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 MAPK11Q15759 364 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 KCNA10Q16322 511 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 VMACQ2NL98 169 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 FLYWCH1Q4VC44 716 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 SLX4IPQ5VYV7 408 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 RNLSQ5VYX0 342 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 KIAA1614Q5VZ46 1190 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 STEAP3Q658P3 488 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 LRRC70Q7Z2Q7 622 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 MIB1Q86YT6 1006 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 VRK3Q8IV63 474 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 LPCAT1Q8NF37 534 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 IL17RDQ8NFM7 739 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 WDR34Q96EX3 536 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 EGLN2Q96KS0 407 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 CINPQ9BW66 212 aaPredicted RBP4.28□□□□□ -1.72
CTSC-208ENST00000533897 CD274Q9NZQ7 290 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 FTSJ1Q9UET6 329 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 KLHL3Q9UH77 587 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 DNMT3LQ9UJW3 386 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 ZNF490Q9ULM2 529 aaPredicted RBP4.28□□□□□ -1.72
CTSC-208ENST00000533897 ZNF232Q9UNY5 417 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.28□□□□□ -1.72
CTSC-208ENST00000533897 UBA6A0AVT1 1052 aaPredicted RBP4.28□□□□□ -1.72
CTSC-208ENST00000533897 C16orf96A6NNT2 1141 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 H3BQ06 376 aaPredicted RBP4.28□□□□□ -1.72
CTSC-208ENST00000533897 KPNA4O00629 521 aaPredicted RBP4.28□□□□□ -1.72
CTSC-208ENST00000533897 RAD51BO15315 384 aa4.28□□□□□ -1.72
CTSC-208ENST00000533897 UGDHO60701 494 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms