RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 MMP21Q8N119 569 aa8.8□□□□□ -1
PACS1-214ENST00000533811 CA5BP1Q8WTZ4 195 aa8.8□□□□□ -1
PACS1-214ENST00000533811 SDCCAG3Q96C92 435 aa8.8□□□□□ -1
PACS1-214ENST00000533811 LRRC45Q96CN5 670 aa8.8□□□□□ -1
PACS1-214ENST00000533811 CDKN2AIPNLQ96HQ2 116 aa8.8□□□□□ -1
PACS1-214ENST00000533811 GPR137Q96N19 417 aa8.8□□□□□ -1
PACS1-214ENST00000533811 MIPEPQ99797 713 aa8.8□□□□□ -1
PACS1-214ENST00000533811 RNF32Q9H0A6 362 aa8.8□□□□□ -1
PACS1-214ENST00000533811 NLE1Q9NVX2 485 aaPredicted RBP8.8□□□□□ -1
PACS1-214ENST00000533811 PIH1D1Q9NWS0 290 aaKnown RBP8.8□□□□□ -1
PACS1-214ENST00000533811 STMN3Q9NZ72 180 aa8.8□□□□□ -1
PACS1-214ENST00000533811 TEKT2Q9UIF3 430 aa8.8□□□□□ -1
PACS1-214ENST00000533811 NPIPA1Q9UND3 350 aa8.8□□□□□ -1
PACS1-214ENST00000533811 MEMO1Q9Y316 297 aa8.8□□□□□ -1
PACS1-214ENST00000533811 PRRC2AP48634 2157 aaKnown RBP8.79□□□□□ -1
PACS1-214ENST00000533811 HEATR5BQ9P2D3 2071 aa8.79□□□□□ -1
PACS1-214ENST00000533811 LOC105369274A0A096LPK9 316 aa8.79□□□□□ -1
PACS1-214ENST00000533811 LOC102723532A0A0G2JNH3 316 aa8.79□□□□□ -1
PACS1-214ENST00000533811 FITM1A5D6W6 292 aa8.79□□□□□ -1
PACS1-214ENST00000533811 RCCD1A6NED2 376 aa8.79□□□□□ -1
PACS1-214ENST00000533811 PSTPIP1O43586 416 aa8.79□□□□□ -1
PACS1-214ENST00000533811 NRP2O60462 931 aa8.79□□□□□ -1
PACS1-214ENST00000533811 SRPX2O60687 465 aaPredicted RBP8.79□□□□□ -1
PACS1-214ENST00000533811 STK10O94804 968 aaKnown RBP8.79□□□□□ -1
PACS1-214ENST00000533811 RPN2P04844 631 aa8.79□□□□□ -1
PACS1-214ENST00000533811 ANXA5P08758 320 aa8.79□□□□□ -1
PACS1-214ENST00000533811 CD99P14209 185 aa8.79□□□□□ -1
PACS1-214ENST00000533811 MSNP26038 577 aaKnown RBP8.79□□□□□ -1
PACS1-214ENST00000533811 CTNNA2P26232 953 aa8.79□□□□□ -1
PACS1-214ENST00000533811 SLC1A1P43005 524 aa8.79□□□□□ -1
PACS1-214ENST00000533811 AP2B1P63010 937 aa8.79□□□□□ -1
PACS1-214ENST00000533811 HSF1Q00613 529 aa8.79□□□□□ -1
PACS1-214ENST00000533811 PLOD1Q02809 727 aaPredicted RBP8.79□□□□□ -1
PACS1-214ENST00000533811 MSLNQ13421 630 aaPredicted RBP8.79□□□□□ -1
PACS1-214ENST00000533811 ITIH4Q14624 930 aa8.79□□□□□ -1
PACS1-214ENST00000533811 POU6F1Q14863 301 aa8.79□□□□□ -1
PACS1-214ENST00000533811 PCOLCEQ15113 449 aa8.79□□□□□ -1
PACS1-214ENST00000533811 TAZQ16635 292 aa8.79□□□□□ -1
PACS1-214ENST00000533811 DNAJC21Q5F1R6 531 aaKnown RBP8.79□□□□□ -1
PACS1-214ENST00000533811 DENND5AQ6IQ26 1287 aa8.79□□□□□ -1
PACS1-214ENST00000533811 TMEM200AQ86VY9 491 aa8.79□□□□□ -1
PACS1-214ENST00000533811 VRK3Q8IV63 474 aa8.79□□□□□ -1
PACS1-214ENST00000533811 RHOT2Q8IXI1 618 aa8.79□□□□□ -1
PACS1-214ENST00000533811 OR4N4Q8N0Y3 316 aa8.79□□□□□ -1
PACS1-214ENST00000533811 OR2L8Q8NGY9 312 aa8.79□□□□□ -1
PACS1-214ENST00000533811 AGAP11Q8TF27 550 aa8.79□□□□□ -1
PACS1-214ENST00000533811 IQCDQ96DY2 449 aa8.79□□□□□ -1
PACS1-214ENST00000533811 C10orf90Q96M02 699 aa8.79□□□□□ -1
PACS1-214ENST00000533811 ZNF285Q96NJ3 590 aa8.79□□□□□ -1
PACS1-214ENST00000533811 FAM118BQ9BPY3 351 aa8.79□□□□□ -1
PACS1-214ENST00000533811 HES7Q9BYE0 225 aa8.79□□□□□ -1
PACS1-214ENST00000533811 GOLPH3Q9H4A6 298 aa8.79□□□□□ -1
PACS1-214ENST00000533811 SPTLC3Q9NUV7 552 aa8.79□□□□□ -1
PACS1-214ENST00000533811 ANKRD10Q9NXR5 420 aa8.79□□□□□ -1
PACS1-214ENST00000533811 IFNKQ9P0W0 207 aa8.79□□□□□ -1
PACS1-214ENST00000533811 PPT2Q9UMR5 302 aa8.79□□□□□ -1
PACS1-214ENST00000533811 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.79□□□□□ -1
PACS1-214ENST00000533811 IGHV3-20A0A0C4DH32 117 aa8.78□□□□□ -1
PACS1-214ENST00000533811 KRT87PA6NCN2 255 aa8.78□□□□□ -1
PACS1-214ENST00000533811 H7C0S8 307 aa8.78□□□□□ -1
PACS1-214ENST00000533811 RASGRF2O14827 1237 aa8.78□□□□□ -1
PACS1-214ENST00000533811 PRPF4O43172 522 aaKnown RBP eCLIP8.78□□□□□ -1
PACS1-214ENST00000533811 OR1I1O60431 355 aa8.78□□□□□ -1
PACS1-214ENST00000533811 SEC24DO94855 1032 aaPredicted RBP8.78□□□□□ -1
PACS1-214ENST00000533811 ZRANB2O95218 330 aaKnown RBP eCLIP8.78□□□□□ -1
PACS1-214ENST00000533811 ICAM2P13598 275 aa8.78□□□□□ -1
PACS1-214ENST00000533811 HOXB4P17483 251 aaPredicted RBP8.78□□□□□ -1
PACS1-214ENST00000533811 BDKRB1P46663 353 aa8.78□□□□□ -1
PACS1-214ENST00000533811 MARCKSL1P49006 195 aa8.78□□□□□ -1
PACS1-214ENST00000533811 SYT16Q17RD7 645 aa8.78□□□□□ -1
PACS1-214ENST00000533811 BTBD16Q32M84 506 aa8.78□□□□□ -1
PACS1-214ENST00000533811 MFSD4BQ5TF39 518 aa8.78□□□□□ -1
PACS1-214ENST00000533811 TTC23LQ6PF05 361 aa8.78□□□□□ -1
PACS1-214ENST00000533811 DARS2Q6PI48 645 aaKnown RBP8.78□□□□□ -1
PACS1-214ENST00000533811 CDKL3Q8IVW4 592 aaPredicted RBP8.78□□□□□ -1
PACS1-214ENST00000533811 SLC22A15Q8IZD6 547 aa8.78□□□□□ -1
PACS1-214ENST00000533811 BEST3Q8N1M1 668 aa8.78□□□□□ -1
PACS1-214ENST00000533811 RAB42Q8N4Z0 105 aa8.78□□□□□ -1
PACS1-214ENST00000533811 LKAAEAR1Q8TD35 194 aa8.78□□□□□ -1
PACS1-214ENST00000533811 STYXQ8WUJ0 223 aa8.78□□□□□ -1
PACS1-214ENST00000533811 SKA2Q8WVK7 121 aaPredicted RBP8.78□□□□□ -1
PACS1-214ENST00000533811 ZUFSPQ96AP4 578 aa8.78□□□□□ -1
PACS1-214ENST00000533811 MMABQ96EY8 250 aaPredicted RBP8.78□□□□□ -1
PACS1-214ENST00000533811 SIGLEC12Q96PQ1 595 aa8.78□□□□□ -1
PACS1-214ENST00000533811 MENTQ9BUN1 341 aa8.78□□□□□ -1
PACS1-214ENST00000533811 ACAT2Q9BWD1 397 aa8.78□□□□□ -1
PACS1-214ENST00000533811 RAB11FIP5Q9BXF6 653 aa8.78□□□□□ -1
PACS1-214ENST00000533811 TRIM5Q9C035 493 aa8.78□□□□□ -1
PACS1-214ENST00000533811 ENKD1Q9H0I2 346 aa8.78□□□□□ -1
PACS1-214ENST00000533811 ZNF700Q9H0M5 742 aa8.78□□□□□ -1
PACS1-214ENST00000533811 C14orf105Q9NVL8 296 aa8.78□□□□□ -1
PACS1-214ENST00000533811 COQ3Q9NZJ6 369 aa8.78□□□□□ -1
PACS1-214ENST00000533811 FEZ2Q9UHY8 353 aaPredicted RBP8.78□□□□□ -1
PACS1-214ENST00000533811 TSR3Q9UJK0 312 aaKnown RBP8.78□□□□□ -1
PACS1-214ENST00000533811 CDC14AQ9UNH5 594 aa8.78□□□□□ -1
PACS1-214ENST00000533811 ZNF835Q9Y2P0 537 aa8.78□□□□□ -1
PACS1-214ENST00000533811 AKAP6Q13023 2319 aa8.78□□□□□ -1
PACS1-214ENST00000533811 HCFC1P51610 2035 aa8.78□□□□□ -1
PACS1-214ENST00000533811 SCN3AQ9NY46 2000 aa8.78□□□□□ -1
PACS1-214ENST00000533811 ABCA4P78363 2273 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms