RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 OXR1Q8N573 874 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 BANPQ8N9N5 519 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 OR2L5Q8NG80 312 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 PMM1Q92871 262 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 SMARCD2Q92925 531 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 CENPNQ96H22 339 aaPredicted RBP6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 COL21A1Q96P44 957 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 NPY6RQ99463 290 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 ELAC1Q9H777 363 aaKnown RBP6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 C11orf16Q9NQ32 467 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 ZNF222Q9UK12 451 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 A0A075B6Q4 140 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 SCDO00767 359 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 GJB5O95377 273 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 C9P02748 559 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 CA3P07451 260 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 NCK1P16333 377 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 BMPR1AP36894 532 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 VLDLRP98155 873 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 IRF9Q00978 393 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 TARDBPQ13148 414 aaKnown RBP eCLIP6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 SCARB2Q14108 478 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 PUM1Q14671 1186 aaKnown RBP eCLIP6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 PAFAH1B3Q15102 231 aaKnown RBP6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 LPAL2Q16609 132 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 CYP1B1Q16678 543 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 RNASE12Q5GAN4 147 aaKnown RBP6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 PDSS1Q5T2R2 415 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 LPCAT4Q643R3 524 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 FAM131AQ6UXB0 335 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 GALNTL5Q7Z4T8 443 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 TMCO2Q7Z6W1 182 aaPredicted RBP6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 OR10H4Q8NGA5 316 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 GRHL3Q8TE85 626 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 KLHL6Q8WZ60 621 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 COQ8BQ96D53 544 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 C16orf70Q9BSU1 422 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 BHLHE41Q9C0J9 482 aaPredicted RBP6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 IL21RQ9HBE5 538 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 P2RX2Q9UBL9 471 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 FETUBQ9UGM5 382 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 RSL24D1Q9UHA3 163 aaKnown RBP6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 CICQ96RK0 1608 aaPredicted RBP6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 HYKKA2RU49 373 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 LEFTY1O75610 366 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 SIX3O95343 332 aaPredicted RBP6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 PIK3CBP42338 1070 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 CLCN4P51793 760 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 ADARP55265 1226 aaKnown RBP6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 RPS21P63220 83 aaKnown RBP6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 GALNT2Q10471 571 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 RIN1Q13671 783 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 UPP1Q16831 310 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 ZNF852Q6ZMS4 543 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 Q6ZVL8 140 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 AHSA2Q719I0 299 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 LAPTM4BQ86VI4 370 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 SVOPLQ8N434 492 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 METTL27Q8N6F8 245 aaPredicted RBP6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 OR6K6Q8NGW6 343 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 MCFD2Q8NI22 146 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 C11orf24Q96F05 449 aaPredicted RBP6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 ZSWIM3Q96MP5 696 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 TUBGCP5Q96RT8 1024 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 UTS2RQ9UKP6 389 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 PCDHGB5Q9Y5G0 923 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 WASHC1A8K0Z3 465 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 WASH3PC4AMC7 463 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 WRBO00258 174 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 ADAMTS3O15072 1205 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 ONECUT3O60422 494 aaPredicted RBP6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 AP2A2O94973 939 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 KAT7O95251 611 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 MYCLP1P12525 358 aaPredicted RBP6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 IL12AP29459 219 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 DSTNP60981 165 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 QPCTQ16769 361 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 CYP27C1Q4G0S4 372 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 AGTRAPQ6RW13 159 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 WASH2PQ6VEQ5 465 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 CPNE8Q86YQ8 564 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 SIAH1Q8IUQ4 282 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 NAT8LQ8N9F0 302 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 ZDHHC12Q96GR4 267 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 ZNF641Q96N77 438 aaPredicted RBP6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 TMEM209Q96SK2 561 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 SLC35A5Q9BS91 424 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 MARK1Q9P0L2 795 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 SIX4Q9UIU6 781 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 MAN2B2Q9Y2E5 1009 aa6.23□□□□□ -1.41
UBQLN1-206ENST00000533705 CAPN8A6NHC0 703 aa6.22□□□□□ -1.41
UBQLN1-206ENST00000533705 ZNF33AQ06730 810 aa6.22□□□□□ -1.41
UBQLN1-206ENST00000533705 DECR1Q16698 335 aa6.22□□□□□ -1.41
UBQLN1-206ENST00000533705 TMEM44Q2T9K0 475 aa6.22□□□□□ -1.41
UBQLN1-206ENST00000533705 TXNRD3NBQ6F5E7 133 aa6.22□□□□□ -1.41
UBQLN1-206ENST00000533705 TMIGD1Q6UXZ0 262 aa6.22□□□□□ -1.41
UBQLN1-206ENST00000533705 FAM43BQ6ZT52 329 aaPredicted RBP6.22□□□□□ -1.41
UBQLN1-206ENST00000533705 NXPE1Q8N323 547 aa6.22□□□□□ -1.41
UBQLN1-206ENST00000533705 CBR4Q8N4T8 237 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms