RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, human

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN1-223	ENST00000533079	FERMT1	Q9BQL6	677 aa		11.86	□□□□□ -0.51
CAPN1-223	ENST00000533079	CARD6	Q9BX69	1037 aa		11.86	□□□□□ -0.51
CAPN1-223	ENST00000533079	C14orf105	Q9NVL8	296 aa		11.86	□□□□□ -0.51
CAPN1-223	ENST00000533079	PLA2G3	Q9NZ20	509 aa		11.86	□□□□□ -0.51
CAPN1-223	ENST00000533079	SAE1	Q9UBE0	346 aa	Predicted RBP	11.86	□□□□□ -0.51
CAPN1-223	ENST00000533079	TEKT2	Q9UIF3	430 aa		11.86	□□□□□ -0.51
CAPN1-223	ENST00000533079	TINAG	Q9UJW2	476 aa		11.86	□□□□□ -0.51
CAPN1-223	ENST00000533079	MEMO1	Q9Y316	297 aa		11.86	□□□□□ -0.51
CAPN1-223	ENST00000533079	HYOU1	Q9Y4L1	999 aa		11.86	□□□□□ -0.51
CAPN1-223	ENST00000533079	ANKRD12	Q6UB98	2062 aa		11.85	□□□□□ -0.51
CAPN1-223	ENST00000533079	SLC5A10	A0PJK1	596 aa		11.85	□□□□□ -0.51
CAPN1-223	ENST00000533079	GRID2IP	A4D2P6	1211 aa		11.85	□□□□□ -0.51
CAPN1-223	ENST00000533079	TARM1	B6A8C7	271 aa		11.85	□□□□□ -0.51
CAPN1-223	ENST00000533079		F8W8V4	182 aa		11.85	□□□□□ -0.51
CAPN1-223	ENST00000533079	CST8	O60676	142 aa		11.85	□□□□□ -0.51
CAPN1-223	ENST00000533079	WFS1	O76024	890 aa		11.85	□□□□□ -0.51
CAPN1-223	ENST00000533079	WDPCP	O95876	746 aa		11.85	□□□□□ -0.51
CAPN1-223	ENST00000533079	OR1D4	P47884	311 aa		11.85	□□□□□ -0.51
CAPN1-223	ENST00000533079	NAP1L1	P55209	391 aa	Known RBP	11.85	□□□□□ -0.51
CAPN1-223	ENST00000533079	CKAP4	Q07065	602 aa	Known RBP	11.85	□□□□□ -0.51
CAPN1-223	ENST00000533079	ITIH4	Q14624	930 aa		11.85	□□□□□ -0.51
CAPN1-223	ENST00000533079	KRTCAP3	Q53RY4	240 aa		11.85	□□□□□ -0.51
CAPN1-223	ENST00000533079	DNAJC21	Q5F1R6	531 aa	Known RBP	11.85	□□□□□ -0.51
CAPN1-223	ENST00000533079	ABHD17B	Q5VST6	288 aa		11.85	□□□□□ -0.51
CAPN1-223	ENST00000533079	MFSD7	Q6UXD7	560 aa		11.85	□□□□□ -0.51
CAPN1-223	ENST00000533079	CLDN19	Q8N6F1	224 aa		11.85	□□□□□ -0.51
CAPN1-223	ENST00000533079	LINC01555	Q8NAE3	123 aa		11.85	□□□□□ -0.51
CAPN1-223	ENST00000533079	SLC35G2	Q8TBE7	412 aa		11.85	□□□□□ -0.51
CAPN1-223	ENST00000533079	ANKRD7	Q92527	254 aa		11.85	□□□□□ -0.51
CAPN1-223	ENST00000533079	ELMO1	Q92556	727 aa		11.85	□□□□□ -0.51
CAPN1-223	ENST00000533079	C8orf44	Q96CB5	159 aa		11.85	□□□□□ -0.51
CAPN1-223	ENST00000533079	MVB12A	Q96EY5	273 aa		11.85	□□□□□ -0.51
CAPN1-223	ENST00000533079	GPR137	Q96N19	417 aa		11.85	□□□□□ -0.51
CAPN1-223	ENST00000533079	GORASP1	Q9BQQ3	440 aa		11.85	□□□□□ -0.51
CAPN1-223	ENST00000533079	MENT	Q9BUN1	341 aa		11.85	□□□□□ -0.51
CAPN1-223	ENST00000533079	RAB11FIP5	Q9BXF6	653 aa		11.85	□□□□□ -0.51
CAPN1-223	ENST00000533079	FAM96A	Q9H5X1	160 aa		11.85	□□□□□ -0.51
CAPN1-223	ENST00000533079	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	11.85	□□□□□ -0.51
CAPN1-223	ENST00000533079	KLK4	Q9Y5K2	254 aa		11.85	□□□□□ -0.51
CAPN1-223	ENST00000533079	MTOR	P42345	2549 aa		11.84	□□□□□ -0.51
CAPN1-223	ENST00000533079	CTAGE15	A4D2H0	777 aa		11.84	□□□□□ -0.51
CAPN1-223	ENST00000533079	DIAPH2	O60879	1101 aa		11.84	□□□□□ -0.51
CAPN1-223	ENST00000533079	FAM155B	O75949	473 aa		11.84	□□□□□ -0.51
CAPN1-223	ENST00000533079	CTAGE8	P0CG41	777 aa		11.84	□□□□□ -0.51
CAPN1-223	ENST00000533079	CD9	P21926	228 aa		11.84	□□□□□ -0.51
CAPN1-223	ENST00000533079	FBL	P22087	321 aa	Known RBP	11.84	□□□□□ -0.51
CAPN1-223	ENST00000533079	MCM3	P25205	808 aa		11.84	□□□□□ -0.51
CAPN1-223	ENST00000533079	EMP3	P54852	163 aa		11.84	□□□□□ -0.51
CAPN1-223	ENST00000533079	MSLN	Q13421	630 aa	Predicted RBP	11.84	□□□□□ -0.51
CAPN1-223	ENST00000533079	PRPSAP1	Q14558	356 aa		11.84	□□□□□ -0.51
CAPN1-223	ENST00000533079	NAA25	Q14CX7	972 aa		11.84	□□□□□ -0.51
CAPN1-223	ENST00000533079	TFDP3	Q5H9I0	405 aa		11.84	□□□□□ -0.51
CAPN1-223	ENST00000533079	CTAGE6	Q86UF2	777 aa		11.84	□□□□□ -0.51
CAPN1-223	ENST00000533079	CREG2	Q8IUH2	290 aa		11.84	□□□□□ -0.51
CAPN1-223	ENST00000533079	SPPL2C	Q8IUH8	684 aa		11.84	□□□□□ -0.51
CAPN1-223	ENST00000533079	DCUN1D3	Q8IWE4	304 aa		11.84	□□□□□ -0.51
CAPN1-223	ENST00000533079	CTAGE4	Q8IX94	777 aa		11.84	□□□□□ -0.51
CAPN1-223	ENST00000533079	METTL27	Q8N6F8	245 aa	Predicted RBP	11.84	□□□□□ -0.51
CAPN1-223	ENST00000533079	ADAMTS18	Q8TE60	1221 aa		11.84	□□□□□ -0.51
CAPN1-223	ENST00000533079	ZUFSP	Q96AP4	578 aa		11.84	□□□□□ -0.51
CAPN1-223	ENST00000533079	PBK	Q96KB5	322 aa		11.84	□□□□□ -0.51
CAPN1-223	ENST00000533079	OSBPL9	Q96SU4	736 aa		11.84	□□□□□ -0.51
CAPN1-223	ENST00000533079	ARNT2	Q9HBZ2	717 aa		11.84	□□□□□ -0.51
CAPN1-223	ENST00000533079	NLE1	Q9NVX2	485 aa	Predicted RBP	11.84	□□□□□ -0.51
CAPN1-223	ENST00000533079	PLAGL1	Q9UM63	463 aa		11.84	□□□□□ -0.51
CAPN1-223	ENST00000533079	MAU2	Q9Y6X3	613 aa		11.84	□□□□□ -0.51
CAPN1-223	ENST00000533079	SEC16A	O15027	2179 aa		11.84	□□□□□ -0.51
CAPN1-223	ENST00000533079	LOC102723996	A0A087X1L8	192 aa		11.83	□□□□□ -0.52
CAPN1-223	ENST00000533079	HYKK	A2RU49	373 aa		11.83	□□□□□ -0.52
CAPN1-223	ENST00000533079	FOXO6	A8MYZ6	492 aa		11.83	□□□□□ -0.52
CAPN1-223	ENST00000533079	IDS	B3KWA1	339 aa		11.83	□□□□□ -0.52
CAPN1-223	ENST00000533079	BHMG1	C9JSJ3	638 aa	Predicted RBP	11.83	□□□□□ -0.52
CAPN1-223	ENST00000533079	PSTPIP1	O43586	416 aa		11.83	□□□□□ -0.52
CAPN1-223	ENST00000533079	OR56A5	P0C7T3	313 aa		11.83	□□□□□ -0.52
CAPN1-223	ENST00000533079	HOXB4	P17483	251 aa	Predicted RBP	11.83	□□□□□ -0.52
CAPN1-223	ENST00000533079	ART1	P52961	327 aa		11.83	□□□□□ -0.52
CAPN1-223	ENST00000533079	CSNK1G2	P78368	415 aa		11.83	□□□□□ -0.52
CAPN1-223	ENST00000533079	DSG2	Q14126	1118 aa		11.83	□□□□□ -0.52
CAPN1-223	ENST00000533079	RPS6KA1	Q15418	735 aa		11.83	□□□□□ -0.52
CAPN1-223	ENST00000533079	DBN1	Q16643	649 aa		11.83	□□□□□ -0.52
CAPN1-223	ENST00000533079	MUM1	Q2TAK8	710 aa		11.83	□□□□□ -0.52
CAPN1-223	ENST00000533079	ZNF766	Q5HY98	468 aa		11.83	□□□□□ -0.52
CAPN1-223	ENST00000533079	C11orf63	Q6NUN7	778 aa		11.83	□□□□□ -0.52
CAPN1-223	ENST00000533079	FIGLA	Q6QHK4	219 aa		11.83	□□□□□ -0.52
CAPN1-223	ENST00000533079	MEX3B	Q6ZN04	569 aa	Known RBP	11.83	□□□□□ -0.52
CAPN1-223	ENST00000533079	TAS2R42	Q7RTR8	314 aa		11.83	□□□□□ -0.52
CAPN1-223	ENST00000533079	SLC22A15	Q8IZD6	547 aa		11.83	□□□□□ -0.52
CAPN1-223	ENST00000533079	OR2L8	Q8NGY9	312 aa		11.83	□□□□□ -0.52
CAPN1-223	ENST00000533079	CA5BP1	Q8WTZ4	195 aa		11.83	□□□□□ -0.52
CAPN1-223	ENST00000533079	DNAJC1	Q96KC8	554 aa	Known RBP	11.83	□□□□□ -0.52
CAPN1-223	ENST00000533079	MESP1	Q9BRJ9	268 aa		11.83	□□□□□ -0.52
CAPN1-223	ENST00000533079	ZNF700	Q9H0M5	742 aa		11.83	□□□□□ -0.52
CAPN1-223	ENST00000533079	SMARCAL1	Q9NZC9	954 aa		11.83	□□□□□ -0.52
CAPN1-223	ENST00000533079	CDC14A	Q9UNH5	594 aa		11.83	□□□□□ -0.52
CAPN1-223	ENST00000533079	KLHL20	Q9Y2M5	609 aa		11.83	□□□□□ -0.52
CAPN1-223	ENST00000533079	DNHD1	Q96M86	4753 aa		11.83	□□□□□ -0.52
CAPN1-223	ENST00000533079	MDC1	Q14676	2089 aa	Known RBP	11.82	□□□□□ -0.52
CAPN1-223	ENST00000533079	MIF4GD	A9UHW6	222 aa	Known RBP	11.82	□□□□□ -0.52
CAPN1-223	ENST00000533079		E9PLN8	166 aa		11.82	□□□□□ -0.52
CAPN1-223	ENST00000533079	RASGRF2	O14827	1237 aa		11.82	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms