RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 ELOAQ14241 798 aaKnown RBP17.03■□□□□ 0.32
PCF11-206ENST00000533018 AGAP7PQ5VUJ5 663 aa17.03■□□□□ 0.32
PCF11-206ENST00000533018 PARP9Q8IXQ6 854 aa17.03■□□□□ 0.32
PCF11-206ENST00000533018 OR2A1Q8NGT9 310 aa17.03■□□□□ 0.32
PCF11-206ENST00000533018 HMGCLL1Q8TB92 370 aa17.03■□□□□ 0.32
PCF11-206ENST00000533018 AGAP4Q96P64 663 aa17.03■□□□□ 0.32
PCF11-206ENST00000533018 SPSB2Q99619 263 aa17.03■□□□□ 0.32
PCF11-206ENST00000533018 DPH7Q9BTV6 452 aa17.03■□□□□ 0.32
PCF11-206ENST00000533018 YIPF2Q9BWQ6 316 aa17.03■□□□□ 0.32
PCF11-206ENST00000533018 ABCF3Q9NUQ8 709 aa17.03■□□□□ 0.32
PCF11-206ENST00000533018 CUEDC1Q9NWM3 386 aaPredicted RBP17.03■□□□□ 0.32
PCF11-206ENST00000533018 STOX2Q9P2F5 926 aaPredicted RBP17.03■□□□□ 0.32
PCF11-206ENST00000533018 HS3ST3B1Q9Y662 390 aa17.03■□□□□ 0.32
PCF11-206ENST00000533018 HEATR5BQ9P2D3 2071 aa17.03■□□□□ 0.32
PCF11-206ENST00000533018 LOC105369274A0A096LPK9 316 aa17.02■□□□□ 0.32
PCF11-206ENST00000533018 LOC102723532A0A0G2JNH3 316 aa17.02■□□□□ 0.32
PCF11-206ENST00000533018 A0A1W2PPV9 198 aa17.02■□□□□ 0.32
PCF11-206ENST00000533018 A1L4Q6 167 aa17.02■□□□□ 0.32
PCF11-206ENST00000533018 MATN4O95460 622 aa17.02■□□□□ 0.32
PCF11-206ENST00000533018 ONECUT2O95948 504 aa17.02■□□□□ 0.32
PCF11-206ENST00000533018 RPA3P35244 121 aaPredicted RBP17.02■□□□□ 0.32
PCF11-206ENST00000533018 YBX1P67809 324 aaKnown RBP17.02■□□□□ 0.32
PCF11-206ENST00000533018 NAA25Q14CX7 972 aa17.02■□□□□ 0.32
PCF11-206ENST00000533018 HIF1AQ16665 826 aa17.02■□□□□ 0.32
PCF11-206ENST00000533018 TYSND1Q2T9J0 566 aa17.02■□□□□ 0.32
PCF11-206ENST00000533018 KLHL38Q2WGJ6 581 aa17.02■□□□□ 0.32
PCF11-206ENST00000533018 TUBB8Q3ZCM7 444 aa17.02■□□□□ 0.32
PCF11-206ENST00000533018 ACSBG2Q5FVE4 666 aa17.02■□□□□ 0.32
PCF11-206ENST00000533018 SUSD1Q6UWL2 747 aa17.02■□□□□ 0.32
PCF11-206ENST00000533018 KIRREL2Q6UWL6 708 aa17.02■□□□□ 0.32
PCF11-206ENST00000533018 OR4N4Q8N0Y3 316 aa17.02■□□□□ 0.32
PCF11-206ENST00000533018 OR9A1PQ8NGU1 263 aa17.02■□□□□ 0.32
PCF11-206ENST00000533018 MIEF2Q96C03 454 aa17.02■□□□□ 0.32
PCF11-206ENST00000533018 CABS1Q96KC9 395 aa17.02■□□□□ 0.32
PCF11-206ENST00000533018 ZNF285Q96NJ3 590 aa17.02■□□□□ 0.32
PCF11-206ENST00000533018 ZFYVE21Q9BQ24 234 aa17.02■□□□□ 0.32
PCF11-206ENST00000533018 CRB3Q9BUF7 120 aa17.02■□□□□ 0.32
PCF11-206ENST00000533018 MRPS30Q9NP92 439 aaKnown RBP17.02■□□□□ 0.32
PCF11-206ENST00000533018 FAM114A2Q9NRY5 505 aa17.02■□□□□ 0.32
PCF11-206ENST00000533018 SEMA3GQ9NS98 782 aa17.02■□□□□ 0.32
PCF11-206ENST00000533018 GALPQ9UBC7 116 aa17.02■□□□□ 0.32
PCF11-206ENST00000533018 ZNF282Q9UDV7 671 aaPredicted RBP17.02■□□□□ 0.32
PCF11-206ENST00000533018 NOTCH2Q04721 2471 aa17.01■□□□□ 0.31
PCF11-206ENST00000533018 CTAGE9A4FU28 777 aa17.01■□□□□ 0.31
PCF11-206ENST00000533018 VPS26AO75436 327 aa17.01■□□□□ 0.31
PCF11-206ENST00000533018 KRT14P02533 472 aa17.01■□□□□ 0.31
PCF11-206ENST00000533018 PKMP14618 531 aaKnown RBP17.01■□□□□ 0.31
PCF11-206ENST00000533018 OGNP20774 298 aaKnown RBP17.01■□□□□ 0.31
PCF11-206ENST00000533018 ATP5DP30049 168 aa17.01■□□□□ 0.31
PCF11-206ENST00000533018 CARSP49589 748 aaKnown RBP17.01■□□□□ 0.31
PCF11-206ENST00000533018 THOC5Q13769 683 aaKnown RBP17.01■□□□□ 0.31
PCF11-206ENST00000533018 DHX34Q14147 1143 aaKnown RBP17.01■□□□□ 0.31
PCF11-206ENST00000533018 MUM1Q2TAK8 710 aa17.01■□□□□ 0.31
PCF11-206ENST00000533018 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.01■□□□□ 0.31
PCF11-206ENST00000533018 KIAA0930Q6ICG6 404 aaPredicted RBP17.01■□□□□ 0.31
PCF11-206ENST00000533018 NEPROQ6NW34 567 aa17.01■□□□□ 0.31
PCF11-206ENST00000533018 PRMT9Q6P2P2 845 aa17.01■□□□□ 0.31
PCF11-206ENST00000533018 CUZD1Q86UP6 607 aa17.01■□□□□ 0.31
PCF11-206ENST00000533018 CILP2Q8IUL8 1156 aa17.01■□□□□ 0.31
PCF11-206ENST00000533018 PRELID2Q8N945 189 aa17.01■□□□□ 0.31
PCF11-206ENST00000533018 DNAJB14Q8TBM8 379 aa17.01■□□□□ 0.31
PCF11-206ENST00000533018 STT3BQ8TCJ2 826 aa17.01■□□□□ 0.31
PCF11-206ENST00000533018 SMPDL3AQ92484 453 aa17.01■□□□□ 0.31
PCF11-206ENST00000533018 INPP5DQ92835 1189 aa17.01■□□□□ 0.31
PCF11-206ENST00000533018 THOC3Q96J01 351 aaKnown RBP17.01■□□□□ 0.31
PCF11-206ENST00000533018 CNDP1Q96KN2 507 aa17.01■□□□□ 0.31
PCF11-206ENST00000533018 WDR77Q9BQA1 342 aaPredicted RBP17.01■□□□□ 0.31
PCF11-206ENST00000533018 TRIM56Q9BRZ2 755 aaKnown RBP17.01■□□□□ 0.31
PCF11-206ENST00000533018 VPS9D1Q9Y2B5 631 aa17.01■□□□□ 0.31
PCF11-206ENST00000533018 SVILO95425 2214 aa17■□□□□ 0.31
PCF11-206ENST00000533018 ANKUB1A6NFN9 424 aa17■□□□□ 0.31
PCF11-206ENST00000533018 ARHGEF33A8MVX0 844 aa17■□□□□ 0.31
PCF11-206ENST00000533018 MED26O95402 600 aa17■□□□□ 0.31
PCF11-206ENST00000533018 CBX6O95503 412 aa17■□□□□ 0.31
PCF11-206ENST00000533018 SYF2O95926 243 aaKnown RBP17■□□□□ 0.31
PCF11-206ENST00000533018 CATP04040 527 aaKnown RBP17■□□□□ 0.31
PCF11-206ENST00000533018 RNF224P0DH78 156 aa17■□□□□ 0.31
PCF11-206ENST00000533018 FBLP22087 321 aaKnown RBP17■□□□□ 0.31
PCF11-206ENST00000533018 ADARP55265 1226 aaKnown RBP17■□□□□ 0.31
PCF11-206ENST00000533018 KLC1Q07866 573 aa17■□□□□ 0.31
PCF11-206ENST00000533018 KCNJ11Q14654 390 aa17■□□□□ 0.31
PCF11-206ENST00000533018 TTLL9Q3SXZ7 439 aa17■□□□□ 0.31
PCF11-206ENST00000533018 ZNF470Q6ECI4 717 aa17■□□□□ 0.31
PCF11-206ENST00000533018 FBXO42Q6P3S6 717 aa17■□□□□ 0.31
PCF11-206ENST00000533018 ZNF662Q6ZS27 426 aa17■□□□□ 0.31
PCF11-206ENST00000533018 Q6ZS92 163 aa17■□□□□ 0.31
PCF11-206ENST00000533018 CENPUQ71F23 418 aa17■□□□□ 0.31
PCF11-206ENST00000533018 RNF44Q7L0R7 432 aa17■□□□□ 0.31
PCF11-206ENST00000533018 OR11G2Q8NGC1 345 aa17■□□□□ 0.31
PCF11-206ENST00000533018 ZNF669Q96BR6 464 aaPredicted RBP17■□□□□ 0.31
PCF11-206ENST00000533018 LHPPQ9H008 270 aa17■□□□□ 0.31
PCF11-206ENST00000533018 CCDC68Q9H2F9 335 aa17■□□□□ 0.31
PCF11-206ENST00000533018 EPS8L2Q9H6S3 715 aa17■□□□□ 0.31
PCF11-206ENST00000533018 AGPAT4Q9NRZ5 378 aa17■□□□□ 0.31
PCF11-206ENST00000533018 INTS10Q9NVR2 710 aaKnown RBP17■□□□□ 0.31
PCF11-206ENST00000533018 C3orf18Q9UK00 162 aa17■□□□□ 0.31
PCF11-206ENST00000533018 KLK4Q9Y5K2 254 aa17■□□□□ 0.31
PCF11-206ENST00000533018 CSAG2Q9Y5P2 127 aa17■□□□□ 0.31
PCF11-206ENST00000533018 UNC79Q9P2D8 2635 aa16.99■□□□□ 0.31
PCF11-206ENST00000533018 OR2A25A4D2G3 310 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms