RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 ICE2Q659A1 982 aa19.07■□□□□ 0.64
CPSF1-209ENST00000532725 N4BP2L2Q92802 583 aaPredicted RBP19.07■□□□□ 0.64
CPSF1-209ENST00000532725 MRRFQ96E11 262 aaKnown RBP19.07■□□□□ 0.64
CPSF1-209ENST00000532725 UBXN10Q96LJ8 280 aa19.07■□□□□ 0.64
CPSF1-209ENST00000532725 LRFN5Q96NI6 719 aa19.07■□□□□ 0.64
CPSF1-209ENST00000532725 DERL2Q9GZP9 239 aa19.07■□□□□ 0.64
CPSF1-209ENST00000532725 ATG10Q9H0Y0 220 aa19.07■□□□□ 0.64
CPSF1-209ENST00000532725 SLC6A20Q9NP91 592 aa19.07■□□□□ 0.64
CPSF1-209ENST00000532725 MRPS30Q9NP92 439 aaKnown RBP19.07■□□□□ 0.64
CPSF1-209ENST00000532725 LHX9Q9NQ69 397 aa19.07■□□□□ 0.64
CPSF1-209ENST00000532725 ENAMQ9NRM1 1142 aa19.07■□□□□ 0.64
CPSF1-209ENST00000532725 ARL15Q9NXU5 204 aa19.07■□□□□ 0.64
CPSF1-209ENST00000532725 MGAQ8IWI9 3026 aa19.06■□□□□ 0.64
CPSF1-209ENST00000532725 OR2A25A4D2G3 310 aa19.06■□□□□ 0.64
CPSF1-209ENST00000532725 E7EQ34 232 aa19.06■□□□□ 0.64
CPSF1-209ENST00000532725 TERTO14746 1132 aaKnown RBP19.06■□□□□ 0.64
CPSF1-209ENST00000532725 ZNF749O43361 778 aa19.06■□□□□ 0.64
CPSF1-209ENST00000532725 NRP2O60462 931 aa19.06■□□□□ 0.64
CPSF1-209ENST00000532725 CPNE3O75131 537 aaKnown RBP19.06■□□□□ 0.64
CPSF1-209ENST00000532725 OR2B3O76000 313 aa19.06■□□□□ 0.64
CPSF1-209ENST00000532725 CCDC166P0CW27 439 aa19.06■□□□□ 0.64
CPSF1-209ENST00000532725 ABATP80404 500 aa19.06■□□□□ 0.64
CPSF1-209ENST00000532725 NAE1Q13564 534 aa19.06■□□□□ 0.64
CPSF1-209ENST00000532725 ZC3H12BQ5HYM0 836 aaKnown RBP19.06■□□□□ 0.64
CPSF1-209ENST00000532725 ARHGAP40Q5TG30 622 aa19.06■□□□□ 0.64
CPSF1-209ENST00000532725 ZNF517Q6ZMY9 492 aaPredicted RBP19.06■□□□□ 0.64
CPSF1-209ENST00000532725 GPR135Q8IZ08 494 aa19.06■□□□□ 0.64
CPSF1-209ENST00000532725 SPATA6LQ8N4H0 392 aa19.06■□□□□ 0.64
CPSF1-209ENST00000532725 EIF1ADQ8N9N8 165 aaKnown RBP19.06■□□□□ 0.64
CPSF1-209ENST00000532725 FBXL8Q96CD0 374 aa19.06■□□□□ 0.64
CPSF1-209ENST00000532725 ZNF285Q96NJ3 590 aa19.06■□□□□ 0.64
CPSF1-209ENST00000532725 PLCD4Q9BRC7 762 aa19.06■□□□□ 0.64
CPSF1-209ENST00000532725 TXLNGYQ9BZA5 131 aa19.06■□□□□ 0.64
CPSF1-209ENST00000532725 CTNNAL1Q9UBT7 734 aa19.06■□□□□ 0.64
CPSF1-209ENST00000532725 NBEAQ8NFP9 2946 aa19.05■□□□□ 0.64
CPSF1-209ENST00000532725 CHD6Q8TD26 2715 aa19.05■□□□□ 0.64
CPSF1-209ENST00000532725 NPEPPSL1A6NEC2 478 aa19.05■□□□□ 0.64
CPSF1-209ENST00000532725 GUCA1CO95843 209 aa19.05■□□□□ 0.64
CPSF1-209ENST00000532725 F8A1P23610 371 aa19.05■□□□□ 0.64
CPSF1-209ENST00000532725 RORAP35398 523 aa19.05■□□□□ 0.64
CPSF1-209ENST00000532725 CSRP3P50461 194 aa19.05■□□□□ 0.64
CPSF1-209ENST00000532725 GPS2Q13227 327 aa19.05■□□□□ 0.64
CPSF1-209ENST00000532725 NAA25Q14CX7 972 aa19.05■□□□□ 0.64
CPSF1-209ENST00000532725 TEX35Q5T0J7 233 aa19.05■□□□□ 0.64
CPSF1-209ENST00000532725 MROH9Q5TGP6 573 aa19.05■□□□□ 0.64
CPSF1-209ENST00000532725 ZNF425Q6IV72 752 aa19.05■□□□□ 0.64
CPSF1-209ENST00000532725 TLDC1Q6P9B6 456 aa19.05■□□□□ 0.64
CPSF1-209ENST00000532725 CMC1Q7Z7K0 106 aa19.05■□□□□ 0.64
CPSF1-209ENST00000532725 PAQR7Q86WK9 346 aa19.05■□□□□ 0.64
CPSF1-209ENST00000532725 OR56A3Q8NH54 315 aa19.05■□□□□ 0.64
CPSF1-209ENST00000532725 SLC44A1Q8WWI5 657 aa19.05■□□□□ 0.64
CPSF1-209ENST00000532725 SGPP1Q9BX95 441 aa19.05■□□□□ 0.64
CPSF1-209ENST00000532725 PCBD2Q9H0N5 130 aa19.05■□□□□ 0.64
CPSF1-209ENST00000532725 ACTR5Q9H9F9 607 aaPredicted RBP19.05■□□□□ 0.64
CPSF1-209ENST00000532725 CCDC177Q9NQR7 707 aaPredicted RBP19.05■□□□□ 0.64
CPSF1-209ENST00000532725 ABCF3Q9NUQ8 709 aa19.05■□□□□ 0.64
CPSF1-209ENST00000532725 UTP6Q9NYH9 597 aaKnown RBP19.05■□□□□ 0.64
CPSF1-209ENST00000532725 ANKMY1Q9P2S6 941 aa19.05■□□□□ 0.64
CPSF1-209ENST00000532725 IL17BQ9UHF5 180 aa19.05■□□□□ 0.64
CPSF1-209ENST00000532725 SNX7Q9UNH6 387 aa19.05■□□□□ 0.64
CPSF1-209ENST00000532725 LHX6Q9UPM6 363 aa19.05■□□□□ 0.64
CPSF1-209ENST00000532725 AP1M2Q9Y6Q5 423 aa19.05■□□□□ 0.64
CPSF1-209ENST00000532725 ZFYVE26Q68DK2 2539 aa19.04■□□□□ 0.64
CPSF1-209ENST00000532725 MEN1O00255 615 aa19.04■□□□□ 0.64
CPSF1-209ENST00000532725 SRPX2O60687 465 aaPredicted RBP19.04■□□□□ 0.64
CPSF1-209ENST00000532725 CCNDBP1O95273 360 aa19.04■□□□□ 0.64
CPSF1-209ENST00000532725 SLC35E2BP0CK96 405 aa19.04■□□□□ 0.64
CPSF1-209ENST00000532725 CD1DP15813 335 aa19.04■□□□□ 0.64
CPSF1-209ENST00000532725 NPPBP16860 134 aa19.04■□□□□ 0.64
CPSF1-209ENST00000532725 CRABP2P29373 138 aa19.04■□□□□ 0.64
CPSF1-209ENST00000532725 GCGRP47871 477 aa19.04■□□□□ 0.64
CPSF1-209ENST00000532725 TBPL1P62380 186 aa19.04■□□□□ 0.64
CPSF1-209ENST00000532725 CDKL1Q00532 357 aa19.04■□□□□ 0.64
CPSF1-209ENST00000532725 RELAQ04206 551 aa19.04■□□□□ 0.64
CPSF1-209ENST00000532725 TSNQ15631 228 aaKnown RBP19.04■□□□□ 0.64
CPSF1-209ENST00000532725 THEMIS2Q5TEJ8 643 aa19.04■□□□□ 0.64
CPSF1-209ENST00000532725 LCN10Q6JVE6 187 aa19.04■□□□□ 0.64
CPSF1-209ENST00000532725 FAM199XQ6PEV8 388 aaPredicted RBP19.04■□□□□ 0.64
CPSF1-209ENST00000532725 TRMT10CQ7L0Y3 403 aaKnown RBP19.04■□□□□ 0.64
CPSF1-209ENST00000532725 GPR155Q7Z3F1 870 aa19.04■□□□□ 0.64
CPSF1-209ENST00000532725 DSELQ8IZU8 1212 aa19.04■□□□□ 0.64
CPSF1-209ENST00000532725 ATL1Q8WXF7 558 aa19.04■□□□□ 0.64
CPSF1-209ENST00000532725 CLIP3Q96DZ5 547 aa19.04■□□□□ 0.64
CPSF1-209ENST00000532725 UNKQ9C0B0 810 aaKnown RBP19.04■□□□□ 0.64
CPSF1-209ENST00000532725 GPN2Q9H9Y4 310 aaPredicted RBP19.04■□□□□ 0.64
CPSF1-209ENST00000532725 PCMTD2Q9NV79 361 aa19.04■□□□□ 0.64
CPSF1-209ENST00000532725 CROTQ9UKG9 612 aa19.04■□□□□ 0.64
CPSF1-209ENST00000532725 OARD1Q9Y530 152 aa19.04■□□□□ 0.64
CPSF1-209ENST00000532725 A0A087WUV0 522 aaPredicted RBP19.03■□□□□ 0.64
CPSF1-209ENST00000532725 LOC105369274A0A096LPK9 316 aa19.03■□□□□ 0.64
CPSF1-209ENST00000532725 LOC102723532A0A0G2JNH3 316 aa19.03■□□□□ 0.64
CPSF1-209ENST00000532725 A0A0J9YVX5 310 aa19.03■□□□□ 0.64
CPSF1-209ENST00000532725 H7BY64 318 aa19.03■□□□□ 0.64
CPSF1-209ENST00000532725 KLK3P07288 261 aaPredicted RBP19.03■□□□□ 0.64
CPSF1-209ENST00000532725 HBQ1P09105 142 aa19.03■□□□□ 0.64
CPSF1-209ENST00000532725 MYBL2P10244 700 aa19.03■□□□□ 0.64
CPSF1-209ENST00000532725 TCN2P20062 427 aa19.03■□□□□ 0.64
CPSF1-209ENST00000532725 CCND1P24385 295 aa19.03■□□□□ 0.64
CPSF1-209ENST00000532725 GMPRP36959 345 aa19.03■□□□□ 0.64
CPSF1-209ENST00000532725 PMS2P54278 862 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms