RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 TAC3Q9UHF0 121 aa13.38□□□□□ -0.27
TSPAN4-220ENST00000532375 IL17BQ9UHF5 180 aa13.38□□□□□ -0.27
TSPAN4-220ENST00000532375 SERTAD3Q9UJW9 196 aa13.38□□□□□ -0.27
TSPAN4-220ENST00000532375 PLCL2Q9UPR0 1127 aa13.38□□□□□ -0.27
TSPAN4-220ENST00000532375 SH2B3Q9UQQ2 575 aa13.38□□□□□ -0.27
TSPAN4-220ENST00000532375 CACNA1GO43497 2377 aa13.38□□□□□ -0.27
TSPAN4-220ENST00000532375 ESPNB1AK53 854 aa13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 ZNF749O43361 778 aa13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 CAPN1P07384 714 aa13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 ENO2P09104 434 aaPredicted RBP13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 SLC35E2BP0CK96 405 aa13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 CD1DP15813 335 aa13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 NPPBP16860 134 aa13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 STMN1P16949 149 aa13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 GCAP28676 217 aa13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 KCNC1P48547 511 aa13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 ATP1A2P50993 1020 aa13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 UCNP55089 124 aa13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 ITGA1P56199 1179 aa13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 AP1S2P56377 157 aa13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 TMPRSS3P57727 454 aa13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 RAB10P61026 200 aa13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 RELAQ04206 551 aa13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 VAC14Q08AM6 782 aa13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 NAE1Q13564 534 aa13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 TSNQ15631 228 aaKnown RBP13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 MANEAQ5SRI9 462 aa13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 BROXQ5VW32 411 aa13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 FRMPD2BQ6IN97 320 aa13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 FAM199XQ6PEV8 388 aaPredicted RBP13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 RNF44Q7L0R7 432 aa13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 CMC1Q7Z7K0 106 aa13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 IL22RA1Q8N6P7 574 aa13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 OR56A3Q8NH54 315 aa13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 PTERQ96BW5 349 aa13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 FBXL8Q96CD0 374 aa13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 TSPAN17Q96FV3 270 aa13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 OR4K3Q96R72 315 aa13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 PLCD4Q9BRC7 762 aa13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 UNKQ9C0B0 810 aaKnown RBP13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 ATG10Q9H0Y0 220 aa13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 INTS7Q9NVH2 962 aaKnown RBP13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 CUEDC1Q9NWM3 386 aaPredicted RBP13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 TXNDC16Q9P2K2 825 aa13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 PADI1Q9ULC6 663 aa13.37□□□□□ -0.27
TSPAN4-220ENST00000532375 LOC105369274A0A096LPK9 316 aa13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 LOC102723532A0A0G2JNH3 316 aa13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 NPEPPSL1A6NEC2 478 aa13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 ZNF839A8K0R7 811 aa13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 MAP3K7O43318 606 aa13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 CPNE3O75131 537 aaKnown RBP13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 OR2B3O76000 313 aa13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 CCDC166P0CW27 439 aa13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 CMPK1P30085 196 aa13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 PHBP35232 272 aa13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 RPA3P35244 121 aaPredicted RBP13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 TBPL1P62380 186 aa13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 CXADRP78310 365 aa13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 ABATP80404 500 aa13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 CDKL1Q00532 357 aa13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 SLMAPQ14BN4 828 aa13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 OR4D1Q15615 310 aa13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 CCDC81Q6ZN84 652 aa13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 TMEM126BQ8IUX1 230 aa13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 DSELQ8IZU8 1212 aa13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 OR4N4Q8N0Y3 316 aa13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 MRRFQ96E11 262 aaKnown RBP13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 SLC45A3Q96JT2 553 aa13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 RUFY1Q96T51 708 aa13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 DHRS4Q9BTZ2 278 aa13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 ANKZF1Q9H8Y5 726 aa13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 ACTR5Q9H9F9 607 aaPredicted RBP13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 FANCEQ9HB96 536 aa13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 MRPS30Q9NP92 439 aaKnown RBP13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 IGSF5Q9NSI5 407 aa13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 ARL15Q9NXU5 204 aa13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 UTP6Q9NYH9 597 aaKnown RBP13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 LHX6Q9UPM6 363 aa13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 PCDHGA4Q9Y5G9 962 aa13.36□□□□□ -0.27
TSPAN4-220ENST00000532375 FITM1A5D6W6 292 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 E7EQ34 232 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 MEN1O00255 615 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 RIPK2O43353 540 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 SRPX2O60687 465 aaPredicted RBP13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 MED26O95402 600 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 MT-ND3P03897 115 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 ALDOAP04075 364 aaKnown RBP13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 C2P06681 752 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 ABHD2P08910 425 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 HIST1H2AGP0C0S8 130 aaPredicted RBP13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 HIST1H2ADP20671 130 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 ITGAXP20702 1163 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 TNFRSF8P28908 595 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 MAGEA12P43365 314 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 SLC12A2P55011 1212 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 BMPR2Q13873 1038 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 COL9A2Q14055 689 aaPredicted RBP13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 ZC3H12BQ5HYM0 836 aaKnown RBP13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 TEX35Q5T0J7 233 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 ARHGAP40Q5TG30 622 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms