RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 FGF5P12034 268 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 PVRP15151 417 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 FOLR1P15328 257 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 NPPBP16860 134 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 MAGP20916 626 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 SEPHS1P49903 392 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 SH3BP2P78314 561 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 ABATP80404 500 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 NAA25Q14CX7 972 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 SF1Q15637 639 aaKnown RBP13.92□□□□□ -0.18
CPSF1-206ENST00000531480 TSNAXIP1Q2TAA8 658 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 TECRLQ5HYJ1 363 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 ICE2Q659A1 982 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 FCRL6Q6DN72 434 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 ZNF425Q6IV72 752 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 LCTLQ6UWM7 567 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 TRIM73Q86UV7 250 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 TAX1BP1Q86VP1 789 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 GPSM1Q86YR5 675 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 TCAIMQ8N3R3 496 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 TMEM151AQ8N4L1 468 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 DNAJC22Q8N4W6 341 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 OR2W6PQ8NHA6 318 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 UBTD2Q8WUN7 234 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 ZNF501Q96CX3 271 aaPredicted RBP13.92□□□□□ -0.18
CPSF1-206ENST00000531480 FCRL4Q96PJ5 515 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 TEFMQ96QE5 360 aaKnown RBP13.92□□□□□ -0.18
CPSF1-206ENST00000531480 OR4K3Q96R72 315 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 ZPBPQ9BS86 351 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 UNKQ9C0B0 810 aaKnown RBP13.92□□□□□ -0.18
CPSF1-206ENST00000531480 VPS11Q9H270 941 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 ALG9Q9H6U8 611 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 PDE7BQ9NP56 450 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 CCDC177Q9NQR7 707 aaPredicted RBP13.92□□□□□ -0.18
CPSF1-206ENST00000531480 INTS7Q9NVH2 962 aaKnown RBP13.92□□□□□ -0.18
CPSF1-206ENST00000531480 UTP6Q9NYH9 597 aaKnown RBP13.92□□□□□ -0.18
CPSF1-206ENST00000531480 NUDT4Q9NZJ9 180 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 PTBP2Q9UKA9 531 aaKnown RBP13.92□□□□□ -0.18
CPSF1-206ENST00000531480 MDC1Q14676 2089 aaKnown RBP13.92□□□□□ -0.18
CPSF1-206ENST00000531480 SDK2Q58EX2 2172 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.91□□□□□ -0.18
CPSF1-206ENST00000531480 MAP2K7O14733 419 aa13.91□□□□□ -0.18
CPSF1-206ENST00000531480 TAPBPO15533 448 aa13.91□□□□□ -0.18
CPSF1-206ENST00000531480 TNFSF15O95150 251 aa13.91□□□□□ -0.18
CPSF1-206ENST00000531480 CCNDBP1O95273 360 aa13.91□□□□□ -0.18
CPSF1-206ENST00000531480 GUCA1CO95843 209 aa13.91□□□□□ -0.18
CPSF1-206ENST00000531480 HRH2P25021 359 aa13.91□□□□□ -0.18
CPSF1-206ENST00000531480 CMPK1P30085 196 aa13.91□□□□□ -0.18
CPSF1-206ENST00000531480 RPA3P35244 121 aaPredicted RBP13.91□□□□□ -0.18
CPSF1-206ENST00000531480 SLCO1A2P46721 670 aa13.91□□□□□ -0.18
CPSF1-206ENST00000531480 YBX1P67809 324 aaKnown RBP13.91□□□□□ -0.18
CPSF1-206ENST00000531480 ACY1Q03154 408 aa13.91□□□□□ -0.18
CPSF1-206ENST00000531480 NAE1Q13564 534 aa13.91□□□□□ -0.18
CPSF1-206ENST00000531480 PTCHD3Q3KNS1 767 aa13.91□□□□□ -0.18
CPSF1-206ENST00000531480 PRAMEF13Q5VWM6 474 aa13.91□□□□□ -0.18
CPSF1-206ENST00000531480 SULT1C3Q6IMI6 304 aa13.91□□□□□ -0.18
CPSF1-206ENST00000531480 CAPN13Q6MZZ7 669 aaPredicted RBP13.91□□□□□ -0.18
CPSF1-206ENST00000531480 CYB5D1Q6P9G0 228 aa13.91□□□□□ -0.18
CPSF1-206ENST00000531480 FIGLAQ6QHK4 219 aa13.91□□□□□ -0.18
CPSF1-206ENST00000531480 CDHR3Q6ZTQ4 885 aa13.91□□□□□ -0.18
CPSF1-206ENST00000531480 FRA10AC1Q70Z53 315 aa13.91□□□□□ -0.18
CPSF1-206ENST00000531480 FAM20CQ8IXL6 584 aa13.91□□□□□ -0.18
CPSF1-206ENST00000531480 OR8K5Q8NH50 307 aa13.91□□□□□ -0.18
CPSF1-206ENST00000531480 ZNF578Q96N58 590 aaPredicted RBP13.91□□□□□ -0.18
CPSF1-206ENST00000531480 ZNF285Q96NJ3 590 aa13.91□□□□□ -0.18
CPSF1-206ENST00000531480 MIPEPQ99797 713 aa13.91□□□□□ -0.18
CPSF1-206ENST00000531480 TMEM79Q9BSE2 394 aa13.91□□□□□ -0.18
CPSF1-206ENST00000531480 ASPSCR1Q9BZE9 553 aa13.91□□□□□ -0.18
CPSF1-206ENST00000531480 ATG10Q9H0Y0 220 aa13.91□□□□□ -0.18
CPSF1-206ENST00000531480 FAM60AQ9NP50 221 aa13.91□□□□□ -0.18
CPSF1-206ENST00000531480 SLC6A20Q9NP91 592 aa13.91□□□□□ -0.18
CPSF1-206ENST00000531480 ZNF358Q9NW07 568 aa13.91□□□□□ -0.18
CPSF1-206ENST00000531480 PISDQ9UG56 409 aa13.91□□□□□ -0.18
CPSF1-206ENST00000531480 TBK1Q9UHD2 729 aa13.91□□□□□ -0.18
CPSF1-206ENST00000531480 TAC3Q9UHF0 121 aa13.91□□□□□ -0.18
CPSF1-206ENST00000531480 PILRAQ9UKJ1 303 aa13.91□□□□□ -0.18
CPSF1-206ENST00000531480 RNF112Q9ULX5 631 aa13.91□□□□□ -0.18
CPSF1-206ENST00000531480 PLAAQ9Y263 795 aa13.91□□□□□ -0.18
CPSF1-206ENST00000531480 SPTBP11277 2137 aa13.9□□□□□ -0.18
CPSF1-206ENST00000531480 A0A1W2PPM1 405 aa13.9□□□□□ -0.18
CPSF1-206ENST00000531480 PABPN1LA6NDY0 278 aaKnown RBP13.9□□□□□ -0.18
CPSF1-206ENST00000531480 SYCE1LA8MT33 242 aa13.9□□□□□ -0.18
CPSF1-206ENST00000531480 PRAMEF10O60809 474 aa13.9□□□□□ -0.18
CPSF1-206ENST00000531480 IPO13O94829 963 aaKnown RBP13.9□□□□□ -0.18
CPSF1-206ENST00000531480 GSTA1P08263 222 aa13.9□□□□□ -0.18
CPSF1-206ENST00000531480 RBP1P09455 135 aa13.9□□□□□ -0.18
CPSF1-206ENST00000531480 SBK3P0C264 359 aa13.9□□□□□ -0.18
CPSF1-206ENST00000531480 EBLN1P0CF75 366 aa13.9□□□□□ -0.18
CPSF1-206ENST00000531480 KCNAB1Q14722 419 aa13.9□□□□□ -0.18
CPSF1-206ENST00000531480 TBC1D25Q3MII6 688 aa13.9□□□□□ -0.18
CPSF1-206ENST00000531480 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.9□□□□□ -0.18
CPSF1-206ENST00000531480 TMTC4Q5T4D3 741 aa13.9□□□□□ -0.18
CPSF1-206ENST00000531480 METTL2BQ6P1Q9 378 aaKnown RBP13.9□□□□□ -0.18
CPSF1-206ENST00000531480 KLC3Q6P597 504 aa13.9□□□□□ -0.18
CPSF1-206ENST00000531480 CEACAM20Q6UY09 585 aa13.9□□□□□ -0.18
CPSF1-206ENST00000531480 PAQR7Q86WK9 346 aa13.9□□□□□ -0.18
CPSF1-206ENST00000531480 FAM129CQ86XR2 697 aa13.9□□□□□ -0.18
CPSF1-206ENST00000531480 ABHD11Q8NFV4 315 aa13.9□□□□□ -0.18
CPSF1-206ENST00000531480 PMEPA1Q969W9 287 aa13.9□□□□□ -0.18
CPSF1-206ENST00000531480 PLCD4Q9BRC7 762 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms