RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 SEMA4CQ9C0C4 833 aa17.97■□□□□ 0.47
GMDS-208ENST00000530927 ATG10Q9H0Y0 220 aa17.97■□□□□ 0.47
GMDS-208ENST00000530927 SYTL2Q9HCH5 934 aa17.97■□□□□ 0.47
GMDS-208ENST00000530927 CUEDC1Q9NWM3 386 aaPredicted RBP17.97■□□□□ 0.47
GMDS-208ENST00000530927 LOC105369274A0A096LPK9 316 aa17.96■□□□□ 0.47
GMDS-208ENST00000530927 LOC102723532A0A0G2JNH3 316 aa17.96■□□□□ 0.47
GMDS-208ENST00000530927 A0A0J9YVX5 310 aa17.96■□□□□ 0.47
GMDS-208ENST00000530927 ZSCAN9O15535 394 aaPredicted RBP17.96■□□□□ 0.47
GMDS-208ENST00000530927 MED26O95402 600 aa17.96■□□□□ 0.47
GMDS-208ENST00000530927 MT-ND3P03897 115 aa17.96■□□□□ 0.47
GMDS-208ENST00000530927 C8GP07360 202 aa17.96■□□□□ 0.47
GMDS-208ENST00000530927 ZNF37AP17032 561 aaPredicted RBP17.96■□□□□ 0.47
GMDS-208ENST00000530927 ERV3-1Q14264 604 aa17.96■□□□□ 0.47
GMDS-208ENST00000530927 ARHGAP19Q14CB8 494 aa17.96■□□□□ 0.47
GMDS-208ENST00000530927 TBR1Q16650 682 aa17.96■□□□□ 0.47
GMDS-208ENST00000530927 ZNF385CQ66K41 422 aaPredicted RBP17.96■□□□□ 0.47
GMDS-208ENST00000530927 ZNF517Q6ZMY9 492 aaPredicted RBP17.96■□□□□ 0.47
GMDS-208ENST00000530927 CTAGE3PQ8IX95 158 aa17.96■□□□□ 0.47
GMDS-208ENST00000530927 GPR135Q8IZ08 494 aa17.96■□□□□ 0.47
GMDS-208ENST00000530927 OR4N4Q8N0Y3 316 aa17.96■□□□□ 0.47
GMDS-208ENST00000530927 SPATA6LQ8N4H0 392 aa17.96■□□□□ 0.47
GMDS-208ENST00000530927 PPM1NQ8N819 430 aa17.96■□□□□ 0.47
GMDS-208ENST00000530927 ALKBH8Q96BT7 664 aaKnown RBP17.96■□□□□ 0.47
GMDS-208ENST00000530927 MRRFQ96E11 262 aaKnown RBP17.96■□□□□ 0.47
GMDS-208ENST00000530927 PHACTR1Q9C0D0 580 aa17.96■□□□□ 0.47
GMDS-208ENST00000530927 SLC7A5P2Q9GIP4 190 aa17.96■□□□□ 0.47
GMDS-208ENST00000530927 ACTL8Q9H568 366 aa17.96■□□□□ 0.47
GMDS-208ENST00000530927 PARVBQ9HBI1 364 aa17.96■□□□□ 0.47
GMDS-208ENST00000530927 MRPS30Q9NP92 439 aaKnown RBP17.96■□□□□ 0.47
GMDS-208ENST00000530927 KALRNO60229 2985 aa17.95■□□□□ 0.46
GMDS-208ENST00000530927 NPEPPSL1A6NEC2 478 aa17.95■□□□□ 0.46
GMDS-208ENST00000530927 ZNF891A8MT65 544 aaPredicted RBP17.95■□□□□ 0.46
GMDS-208ENST00000530927 CDC7O00311 574 aa17.95■□□□□ 0.46
GMDS-208ENST00000530927 PHGDHO43175 533 aaKnown RBP17.95■□□□□ 0.46
GMDS-208ENST00000530927 CAPN1P07384 714 aa17.95■□□□□ 0.46
GMDS-208ENST00000530927 RHOXF2BP0C7M4 288 aa17.95■□□□□ 0.46
GMDS-208ENST00000530927 VSX2P58304 361 aaPredicted RBP17.95■□□□□ 0.46
GMDS-208ENST00000530927 TBPL1P62380 186 aa17.95■□□□□ 0.46
GMDS-208ENST00000530927 RHDQ02161 417 aa17.95■□□□□ 0.46
GMDS-208ENST00000530927 CDC20Q12834 499 aa17.95■□□□□ 0.46
GMDS-208ENST00000530927 SLC9A5Q14940 896 aa17.95■□□□□ 0.46
GMDS-208ENST00000530927 TAF1BQ53T94 588 aaPredicted RBP17.95■□□□□ 0.46
GMDS-208ENST00000530927 ICE2Q659A1 982 aa17.95■□□□□ 0.46
GMDS-208ENST00000530927 FBXO42Q6P3S6 717 aa17.95■□□□□ 0.46
GMDS-208ENST00000530927 FAM198BQ6UWH4 519 aa17.95■□□□□ 0.46
GMDS-208ENST00000530927 PLD3Q8IV08 490 aa17.95■□□□□ 0.46
GMDS-208ENST00000530927 MED8Q96G25 268 aa17.95■□□□□ 0.46
GMDS-208ENST00000530927 RBBP8Q99708 897 aa17.95■□□□□ 0.46
GMDS-208ENST00000530927 RHOXF2Q9BQY4 288 aa17.95■□□□□ 0.46
GMDS-208ENST00000530927 INTS7Q9NVH2 962 aaKnown RBP17.95■□□□□ 0.46
GMDS-208ENST00000530927 UTP6Q9NYH9 597 aaKnown RBP17.95■□□□□ 0.46
GMDS-208ENST00000530927 ANKRD12Q6UB98 2062 aa17.94■□□□□ 0.46
GMDS-208ENST00000530927 BSNQ9UPA5 3926 aa17.94■□□□□ 0.46
GMDS-208ENST00000530927 OR2A25A4D2G3 310 aa17.94■□□□□ 0.46
GMDS-208ENST00000530927 ERVH48-1M5A8F1 160 aa17.94■□□□□ 0.46
GMDS-208ENST00000530927 ATXN7O15265 892 aaPredicted RBP17.94■□□□□ 0.46
GMDS-208ENST00000530927 GUCA1CO95843 209 aa17.94■□□□□ 0.46
GMDS-208ENST00000530927 STATHP02808 62 aa17.94■□□□□ 0.46
GMDS-208ENST00000530927 ITGAXP20702 1163 aa17.94■□□□□ 0.46
GMDS-208ENST00000530927 CMPK1P30085 196 aa17.94■□□□□ 0.46
GMDS-208ENST00000530927 THEMIS2Q5TEJ8 643 aa17.94■□□□□ 0.46
GMDS-208ENST00000530927 LRRC8EQ6NSJ5 796 aa17.94■□□□□ 0.46
GMDS-208ENST00000530927 AGTRAPQ6RW13 159 aa17.94■□□□□ 0.46
GMDS-208ENST00000530927 SBSNQ6UWP8 590 aa17.94■□□□□ 0.46
GMDS-208ENST00000530927 PAQR7Q86WK9 346 aa17.94■□□□□ 0.46
GMDS-208ENST00000530927 METTL27Q8N6F8 245 aaPredicted RBP17.94■□□□□ 0.46
GMDS-208ENST00000530927 EXD3Q8N9H8 876 aa17.94■□□□□ 0.46
GMDS-208ENST00000530927 MCOLN3Q8TDD5 553 aa17.94■□□□□ 0.46
GMDS-208ENST00000530927 CDKL2Q92772 493 aa17.94■□□□□ 0.46
GMDS-208ENST00000530927 ZUFSPQ96AP4 578 aa17.94■□□□□ 0.46
GMDS-208ENST00000530927 PYCR2Q96C36 320 aa17.94■□□□□ 0.46
GMDS-208ENST00000530927 LRFN5Q96NI6 719 aa17.94■□□□□ 0.46
GMDS-208ENST00000530927 CPNE1Q99829 537 aa17.94■□□□□ 0.46
GMDS-208ENST00000530927 SELENOSQ9BQE4 189 aa17.94■□□□□ 0.46
GMDS-208ENST00000530927 NSMCE4AQ9NXX6 385 aa17.94■□□□□ 0.46
GMDS-208ENST00000530927 NINJ2Q9NZG7 142 aa17.94■□□□□ 0.46
GMDS-208ENST00000530927 KLK4Q9Y5K2 254 aa17.94■□□□□ 0.46
GMDS-208ENST00000530927 PCM1Q15154 2024 aa17.94■□□□□ 0.46
GMDS-208ENST00000530927 TARM1B6A8C7 271 aa17.93■□□□□ 0.46
GMDS-208ENST00000530927 SLC16A5O15375 505 aa17.93■□□□□ 0.46
GMDS-208ENST00000530927 WISP3O95389 354 aaPredicted RBP17.93■□□□□ 0.46
GMDS-208ENST00000530927 KLK3P07288 261 aaPredicted RBP17.93■□□□□ 0.46
GMDS-208ENST00000530927 GSTA2P09210 222 aa17.93■□□□□ 0.46
GMDS-208ENST00000530927 FAM87AP0C7U9 286 aa17.93■□□□□ 0.46
GMDS-208ENST00000530927 GP5P40197 560 aa17.93■□□□□ 0.46
GMDS-208ENST00000530927 GCGRP47871 477 aa17.93■□□□□ 0.46
GMDS-208ENST00000530927 PRDX1Q06830 199 aaKnown RBP17.93■□□□□ 0.46
GMDS-208ENST00000530927 SP140Q13342 867 aa17.93■□□□□ 0.46
GMDS-208ENST00000530927 NAE1Q13564 534 aa17.93■□□□□ 0.46
GMDS-208ENST00000530927 IL10RAQ13651 578 aa17.93■□□□□ 0.46
GMDS-208ENST00000530927 DEFB109BQ30KR1 87 aa17.93■□□□□ 0.46
GMDS-208ENST00000530927 RNF44Q7L0R7 432 aa17.93■□□□□ 0.46
GMDS-208ENST00000530927 IFT20Q8IY31 132 aa17.93■□□□□ 0.46
GMDS-208ENST00000530927 ENDOVQ8N8Q3 282 aaKnown RBP17.93■□□□□ 0.46
GMDS-208ENST00000530927 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.93■□□□□ 0.46
GMDS-208ENST00000530927 CCDC138Q96M89 665 aa17.93■□□□□ 0.46
GMDS-208ENST00000530927 GBP5Q96PP8 586 aa17.93■□□□□ 0.46
GMDS-208ENST00000530927 PLCD4Q9BRC7 762 aa17.93■□□□□ 0.46
GMDS-208ENST00000530927 ARL15Q9NXU5 204 aa17.93■□□□□ 0.46
GMDS-208ENST00000530927 TXNDC16Q9P2K2 825 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms