RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 CPSF4LA6NMK7 179 aaKnown RBP8.27□□□□□ -1.08
CTNND1-227ENST00000530748 ARPC2O15144 300 aa8.27□□□□□ -1.08
CTNND1-227ENST00000530748 AP1S2P56377 157 aa8.27□□□□□ -1.08
CTNND1-227ENST00000530748 TEAD2Q15562 447 aa8.27□□□□□ -1.08
CTNND1-227ENST00000530748 NPY5RQ15761 445 aa8.27□□□□□ -1.08
CTNND1-227ENST00000530748 AMZ1Q400G9 498 aa8.27□□□□□ -1.08
CTNND1-227ENST00000530748 CRTC2Q53ET0 693 aaPredicted RBP8.27□□□□□ -1.08
CTNND1-227ENST00000530748 ZBTB46Q86UZ6 589 aa8.27□□□□□ -1.08
CTNND1-227ENST00000530748 OSTM1Q86WC4 334 aa8.27□□□□□ -1.08
CTNND1-227ENST00000530748 STX12Q86Y82 276 aa8.27□□□□□ -1.08
CTNND1-227ENST00000530748 SLITRK4Q8IW52 837 aa8.27□□□□□ -1.08
CTNND1-227ENST00000530748 FAM110BQ8TC76 370 aa8.27□□□□□ -1.08
CTNND1-227ENST00000530748 SLC35F5Q8WV83 523 aa8.27□□□□□ -1.08
CTNND1-227ENST00000530748 KCNC2Q96PR1 638 aa8.27□□□□□ -1.08
CTNND1-227ENST00000530748 POPDC3Q9HBV1 291 aa8.27□□□□□ -1.08
CTNND1-227ENST00000530748 NKIRAS2Q9NYR9 191 aa8.27□□□□□ -1.08
CTNND1-227ENST00000530748 ITGA10O75578 1167 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 ZNF432O94892 652 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 TGFB1P01137 390 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 PRKCHP24723 683 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 ARF5P84085 180 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 ENPP2Q13822 863 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 CWF19L1Q69YN2 538 aaKnown RBP8.27□□□□□ -1.09
CTNND1-227ENST00000530748 ADGRD2Q7Z7M1 963 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 DENND1AQ8TEH3 1009 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 NCSTNQ92542 709 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 CDKN2AIPNLQ96HQ2 116 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 EBF4Q9BQW3 602 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 COPS4Q9BT78 406 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 SP140LQ9H930 580 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 FANCFQ9NPI8 374 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 CFL2Q9Y281 166 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 TELO2Q9Y4R8 837 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 PCDHB11Q9Y5F2 797 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 FAM172BPA6NC97 362 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 TEX46H3BTG2 121 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 WRBO00258 174 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 SCDO00767 359 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 CPNE3O75131 537 aaKnown RBP8.27□□□□□ -1.09
CTNND1-227ENST00000530748 CFHP08603 1231 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 UGT1A6P19224 532 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 UGT1A1P22309 533 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 UGT1A4P22310 534 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 ACTR1BP42025 376 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 ACTR1AP61163 376 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 MXD1Q05195 221 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 ZNF33AQ06730 810 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 KHDC1Q4VXA5 237 aaKnown RBP8.27□□□□□ -1.09
CTNND1-227ENST00000530748 LIN52Q52LA3 116 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 TMEM214Q6NUQ4 689 aaKnown RBP8.27□□□□□ -1.09
CTNND1-227ENST00000530748 FAM156AQ8NDB6 213 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 CMASQ8NFW8 434 aaPredicted RBP8.27□□□□□ -1.09
CTNND1-227ENST00000530748 SUN3Q8TAQ9 357 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 FEM1AQ9BSK4 669 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 TPK1Q9H3S4 243 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 LYARQ9NX58 379 aaKnown RBP8.27□□□□□ -1.09
CTNND1-227ENST00000530748 TAC3Q9UHF0 121 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 ZNF726A6NNF4 738 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 CXorf49A8MYA2 514 aaPredicted RBP8.27□□□□□ -1.09
CTNND1-227ENST00000530748 LEFTY2O00292 366 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 PPEF2O14830 753 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 NOS1APO75052 506 aaPredicted RBP8.27□□□□□ -1.09
CTNND1-227ENST00000530748 BCHEP06276 602 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 DGKEP52429 567 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 MC1RQ01726 317 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 NUP188Q5SRE5 1749 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 LRRC66Q68CR7 880 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 C22orf39Q6P5X5 142 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 RNF19BQ6ZMZ0 732 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 IQCHQ86VS3 1027 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 SLC22A15Q8IZD6 547 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 CENPSQ8N2Z9 138 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 PACRGLQ8N7B6 248 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 MINDY2Q8NBR6 621 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 PROKR2Q8NFJ6 384 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 OR2L3Q8NG85 312 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 OR56A1Q8NGH5 318 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 NFKBIDQ8NI38 313 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 SDHAF3Q9NRP4 125 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 GKN1Q9NS71 199 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 SLC2A6Q9UGQ3 507 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 MEMO1Q9Y316 297 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 PCDHGB5Q9Y5G0 923 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 CLCA3PQ9Y6N3 262 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 LRRC37A3O60309 1634 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 GNB5O14775 395 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 CLDN7O95471 211 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 EDNRAP25101 427 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 HSD11B1P28845 292 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 MAGEA11P43364 429 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 PLGLB1Q02325 96 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 GALNT2Q10471 571 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 MERTKQ12866 999 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 SEMA3AQ14563 771 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 GFOD2Q3B7J2 385 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 FRG2Q64ET8 278 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 SLC39A4Q6P5W5 647 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 EPGNQ6UW88 154 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 NAPRTQ6XQN6 538 aa8.27□□□□□ -1.09
CTNND1-227ENST00000530748 C9orf43Q8TAL5 461 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms