RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 UNGP13051 313 aaPredicted RBP7.46□□□□□ -1.22
CTNND1-223ENST00000529986 PORP16435 677 aaPredicted RBP7.46□□□□□ -1.22
CTNND1-223ENST00000529986 KCNA5P22460 613 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 AHCYP23526 432 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 INHBEP58166 350 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 TAF10Q12962 218 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 CYP27C1Q4G0S4 372 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 LRRC73Q5JTD7 316 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 CXCL17Q6UXB2 119 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 CCBE1Q6UXH8 406 aaPredicted RBP7.46□□□□□ -1.22
CTNND1-223ENST00000529986 SPATA31D4Q6ZUB0 917 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 ADGRG6Q86SQ4 1221 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 CMTR2Q8IYT2 770 aaKnown RBP7.46□□□□□ -1.22
CTNND1-223ENST00000529986 KCT2Q8NC54 265 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 SRFBP1Q8NEF9 429 aaKnown RBP7.46□□□□□ -1.22
CTNND1-223ENST00000529986 OR6C4Q8NGE1 309 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 PRR11Q96HE9 360 aaPredicted RBP7.46□□□□□ -1.22
CTNND1-223ENST00000529986 RIPOR3Q96MK2 946 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 ZNF471Q9BX82 626 aaPredicted RBP7.46□□□□□ -1.22
CTNND1-223ENST00000529986 LGR4Q9BXB1 951 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 NUSAP1Q9BXS6 441 aaKnown RBP7.46□□□□□ -1.22
CTNND1-223ENST00000529986 ABHD16BQ9H3Z7 469 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 EXO5Q9H790 373 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 TMEM9Q9P0T7 183 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 ACTR3BQ9P1U1 418 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 GALPQ9UBC7 116 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 PTBP2Q9UKA9 531 aaKnown RBP7.46□□□□□ -1.22
CTNND1-223ENST00000529986 ERVK-11Q9UQG0 969 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 FARSAQ9Y285 508 aaKnown RBP7.46□□□□□ -1.22
CTNND1-223ENST00000529986 PLEKHA6Q9Y2H5 1048 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 PCDHGB3Q9Y5G1 929 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 ELOA3DA6NLF2 546 aaPredicted RBP7.46□□□□□ -1.22
CTNND1-223ENST00000529986 H0YJX3 145 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 J3QLW9 94 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 MATN3O15232 486 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 PEPDP12955 493 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 IL7P13232 177 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 ZNF19P17023 458 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 EDNRAP25101 427 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 SPAM1P38567 509 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 GRM5P41594 1212 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 MVKQ03426 396 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 SLC10A7Q0GE19 358 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 PUM1Q14671 1186 aaKnown RBP eCLIP7.46□□□□□ -1.22
CTNND1-223ENST00000529986 ELOA3BQ3SY89 546 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 HSD17B12Q53GQ0 312 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 DGLUCYQ7Z3D6 616 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 SDR16C5Q8N3Y7 309 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 AQP11Q8NBQ7 271 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 ELOA3Q8NG57 546 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 PMEPA1Q969W9 287 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 RFT1Q96AA3 541 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 EFHD2Q96C19 240 aaPredicted RBP7.46□□□□□ -1.22
CTNND1-223ENST00000529986 COL21A1Q96P44 957 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 FTHL17Q9BXU8 183 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 ERVK-18Q9QC07 812 aa7.46□□□□□ -1.22
CTNND1-223ENST00000529986 H3BNH8 94 aa7.45□□□□□ -1.22
CTNND1-223ENST00000529986 NIPSNAP2O75323 286 aa7.45□□□□□ -1.22
CTNND1-223ENST00000529986 OXSR1O95747 527 aaPredicted RBP7.45□□□□□ -1.22
CTNND1-223ENST00000529986 DLDP09622 509 aaKnown RBP7.45□□□□□ -1.22
CTNND1-223ENST00000529986 CKMT1AP12532 417 aa7.45□□□□□ -1.22
CTNND1-223ENST00000529986 PTX3P26022 381 aaPredicted RBP7.45□□□□□ -1.22
CTNND1-223ENST00000529986 HADHBP55084 474 aaKnown RBP7.45□□□□□ -1.22
CTNND1-223ENST00000529986 NFKB2Q00653 900 aa7.45□□□□□ -1.22
CTNND1-223ENST00000529986 CCDC58Q4VC31 144 aa7.45□□□□□ -1.22
CTNND1-223ENST00000529986 PABPC1LQ4VXU2 614 aaKnown RBP7.45□□□□□ -1.22
CTNND1-223ENST00000529986 MON1AQ86VX9 555 aa7.45□□□□□ -1.22
CTNND1-223ENST00000529986 LRRC52Q8N7C0 313 aa7.45□□□□□ -1.22
CTNND1-223ENST00000529986 GLB1L3Q8NCI6 653 aaPredicted RBP7.45□□□□□ -1.22
CTNND1-223ENST00000529986 SLC35G5Q96KT7 338 aa7.45□□□□□ -1.22
CTNND1-223ENST00000529986 THG1LQ9NWX6 298 aaKnown RBP7.45□□□□□ -1.22
CTNND1-223ENST00000529986 UBQLN2Q9UHD9 624 aa7.45□□□□□ -1.22
CTNND1-223ENST00000529986 TRAV19A0A0A6YYK7 116 aa7.45□□□□□ -1.22
CTNND1-223ENST00000529986 ADAMTS3O15072 1205 aa7.45□□□□□ -1.22
CTNND1-223ENST00000529986 ATG13O75143 517 aa7.45□□□□□ -1.22
CTNND1-223ENST00000529986 RNASEH2AO75792 299 aaKnown RBP7.45□□□□□ -1.22
CTNND1-223ENST00000529986 CAPN15O75808 1086 aa7.45□□□□□ -1.22
CTNND1-223ENST00000529986 ZNF14P17017 642 aaPredicted RBP7.45□□□□□ -1.22
CTNND1-223ENST00000529986 TUBG1P23258 451 aa7.45□□□□□ -1.22
CTNND1-223ENST00000529986 ACVR2AP27037 513 aa7.45□□□□□ -1.22
CTNND1-223ENST00000529986 MLLT10P55197 1068 aa7.45□□□□□ -1.22
CTNND1-223ENST00000529986 PPP1R3AQ16821 1122 aa7.45□□□□□ -1.22
CTNND1-223ENST00000529986 MBLAC2Q68D91 279 aa7.45□□□□□ -1.22
CTNND1-223ENST00000529986 MTFR2Q6P444 385 aa7.45□□□□□ -1.22
CTNND1-223ENST00000529986 LRRC69Q6ZNQ3 347 aa7.45□□□□□ -1.22
CTNND1-223ENST00000529986 VTCN1Q7Z7D3 282 aa7.45□□□□□ -1.22
CTNND1-223ENST00000529986 TAC4Q86UU9 113 aa7.45□□□□□ -1.22
CTNND1-223ENST00000529986 FAM124AQ86V42 546 aa7.45□□□□□ -1.22
CTNND1-223ENST00000529986 ZNF676Q8N7Q3 588 aa7.45□□□□□ -1.22
CTNND1-223ENST00000529986 OR8S1Q8NH09 359 aa7.45□□□□□ -1.22
CTNND1-223ENST00000529986 SLC35B2Q8TB61 432 aa7.45□□□□□ -1.22
CTNND1-223ENST00000529986 ZCCHC10Q8TBK6 192 aa7.45□□□□□ -1.22
CTNND1-223ENST00000529986 CASTOR1Q8WTX7 329 aa7.45□□□□□ -1.22
CTNND1-223ENST00000529986 CCDC107Q8WV48 283 aa7.45□□□□□ -1.22
CTNND1-223ENST00000529986 HEPHQ9BQS7 1158 aa7.45□□□□□ -1.22
CTNND1-223ENST00000529986 C1QTNF7Q9BXJ2 289 aa7.45□□□□□ -1.22
CTNND1-223ENST00000529986 PPIL3Q9H2H8 161 aaKnown RBP7.45□□□□□ -1.22
CTNND1-223ENST00000529986 RRAGCQ9HB90 399 aa7.45□□□□□ -1.22
CTNND1-223ENST00000529986 PAK1IP1Q9NWT1 392 aaPredicted RBP7.45□□□□□ -1.22
CTNND1-223ENST00000529986 TAS2R9Q9NYW1 312 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms