RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 DAPK2Q9UIK4 370 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 JRKLQ9Y4A0 524 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 A0A1W2PPW3 197 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 SDR42E2A6NKP2 422 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 FAM72CH0Y354 149 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 PLOD2O00469 737 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 PRAF2O60831 178 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 PGLSO95336 258 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 PIGNO95427 931 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 GSRP00390 522 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 PRSS1P07477 247 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 EEF2P13639 858 aaKnown RBP4.2□□□□□ -1.74
C11orf88-204ENST00000529661 IRF2P14316 349 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 LBPP18428 481 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 JAK1P23458 1154 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 MNDAP41218 407 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 RPL21P46778 160 aaKnown RBP4.2□□□□□ -1.74
C11orf88-204ENST00000529661 NR2C2P49116 596 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 LINC01547P58512 204 aaPredicted RBP4.2□□□□□ -1.74
C11orf88-204ENST00000529661 LGALS3BPQ08380 585 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 PTGISQ16647 500 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 MRGPRG-AS1Q2M3A8 158 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 ZNF674Q2M3X9 581 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 CTU2Q2VPK5 515 aaKnown RBP4.2□□□□□ -1.74
C11orf88-204ENST00000529661 LBHQ53QV2 105 aaPredicted RBP4.2□□□□□ -1.74
C11orf88-204ENST00000529661 FAM72AQ5TYM5 149 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 SUSD4Q5VX71 490 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 FAM72DQ6L9T8 149 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 PLBD1Q6P4A8 553 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 ZSCAN30Q86W11 494 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 FAM72BQ86X60 149 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 RASGEF1AQ8N9B8 481 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 UXS1Q8NBZ7 420 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 DBF4BQ8NFT6 615 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 OR2T12Q8NG77 320 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 CTCFLQ8NI51 663 aaPredicted RBP4.2□□□□□ -1.74
C11orf88-204ENST00000529661 ZNF473Q8WTR7 871 aaKnown RBP4.2□□□□□ -1.74
C11orf88-204ENST00000529661 FBXO17Q96EF6 278 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 THOC1Q96FV9 657 aaKnown RBP4.2□□□□□ -1.74
C11orf88-204ENST00000529661 FAM71F1Q96KD3 344 aaPredicted RBP4.2□□□□□ -1.74
C11orf88-204ENST00000529661 TRAF4Q9BUZ4 470 aaPredicted RBP4.2□□□□□ -1.74
C11orf88-204ENST00000529661 UTP14AQ9BVJ6 771 aaKnown RBP4.2□□□□□ -1.74
C11orf88-204ENST00000529661 ZNF350Q9GZX5 532 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 S1PR5Q9H228 398 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 TUFT1Q9NNX1 390 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 IL1RAPL2Q9NP60 686 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 A4GALTQ9NPC4 353 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 SLC7A7Q9UM01 511 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 SNX5Q9Y5X3 404 aa4.2□□□□□ -1.74
C11orf88-204ENST00000529661 LRRD1A4D1F6 860 aa4.19□□□□□ -1.74
C11orf88-204ENST00000529661 YDJCA8MPS7 323 aa4.19□□□□□ -1.74
C11orf88-204ENST00000529661 FGF5P12034 268 aa4.19□□□□□ -1.74
C11orf88-204ENST00000529661 MYL6BP14649 208 aa4.19□□□□□ -1.74
C11orf88-204ENST00000529661 PDX1P52945 283 aa4.19□□□□□ -1.74
C11orf88-204ENST00000529661 B3GALT5-AS1P59052 145 aa4.19□□□□□ -1.74
C11orf88-204ENST00000529661 ASIC1P78348 528 aa4.19□□□□□ -1.74
C11orf88-204ENST00000529661 ILF2Q12905 390 aaKnown RBP4.19□□□□□ -1.74
C11orf88-204ENST00000529661 RBM39Q14498 530 aaKnown RBP4.19□□□□□ -1.74
C11orf88-204ENST00000529661 ODF4Q2M2E3 257 aa4.19□□□□□ -1.74
C11orf88-204ENST00000529661 KBTBD12Q3ZCT8 623 aa4.19□□□□□ -1.74
C11orf88-204ENST00000529661 LCE1EQ5T753 118 aa4.19□□□□□ -1.74
C11orf88-204ENST00000529661 CYB5D1Q6P9G0 228 aa4.19□□□□□ -1.74
C11orf88-204ENST00000529661 ANKRD33Q7Z3H0 272 aa4.19□□□□□ -1.74
C11orf88-204ENST00000529661 KLHDC8BQ8IXV7 354 aa4.19□□□□□ -1.74
C11orf88-204ENST00000529661 SYCP3Q8IZU3 236 aa4.19□□□□□ -1.74
C11orf88-204ENST00000529661 RYBPQ8N488 228 aaPredicted RBP4.19□□□□□ -1.74
C11orf88-204ENST00000529661 C10orf53Q8N6V4 93 aa4.19□□□□□ -1.74
C11orf88-204ENST00000529661 MAPKAPK5-AS1Q8N8E1 139 aa4.19□□□□□ -1.74
C11orf88-204ENST00000529661 OR11H4Q8NGC9 324 aa4.19□□□□□ -1.74
C11orf88-204ENST00000529661 OR4K1Q8NGD4 311 aa4.19□□□□□ -1.74
C11orf88-204ENST00000529661 RIT1Q92963 219 aa4.19□□□□□ -1.74
C11orf88-204ENST00000529661 SGF29Q96ES7 293 aa4.19□□□□□ -1.74
C11orf88-204ENST00000529661 BSCL2Q96G97 398 aaPredicted RBP4.19□□□□□ -1.74
C11orf88-204ENST00000529661 FAM20AQ96MK3 541 aa4.19□□□□□ -1.74
C11orf88-204ENST00000529661 MIS12Q9H081 205 aa4.19□□□□□ -1.74
C11orf88-204ENST00000529661 UPF2Q9HAU5 1272 aaKnown RBP4.19□□□□□ -1.74
C11orf88-204ENST00000529661 SCRT2Q9NQ03 307 aa4.19□□□□□ -1.74
C11orf88-204ENST00000529661 ABCB8Q9NUT2 735 aa4.19□□□□□ -1.74
C11orf88-204ENST00000529661 CWC25Q9NXE8 425 aaPredicted RBP4.19□□□□□ -1.74
C11orf88-204ENST00000529661 ZDHHC2Q9UIJ5 367 aa4.19□□□□□ -1.74
C11orf88-204ENST00000529661 TCF19Q9Y242 345 aa4.19□□□□□ -1.74
C11orf88-204ENST00000529661 TMED3Q9Y3Q3 217 aa4.19□□□□□ -1.74
C11orf88-204ENST00000529661 A0A1W2PN81 502 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 CYSRT1A8MQ03 144 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 SLC33A1O00400 549 aaPredicted RBP4.18□□□□□ -1.74
C11orf88-204ENST00000529661 FLRT2O43155 660 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 ST8SIA3O43173 380 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 PRKNO60260 465 aaPredicted RBP4.18□□□□□ -1.74
C11orf88-204ENST00000529661 PRKRAO75569 313 aaKnown RBP4.18□□□□□ -1.74
C11orf88-204ENST00000529661 ANKRD34CP0C6C1 535 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 CFC1BP0CG36 223 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 CFC1P0CG37 223 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 EPHA2P29317 976 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 CHRNA7P36544 502 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 GLIPR1P48060 266 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 VAMP7P51809 220 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 STX1BP61266 288 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 RASGEF1BQ0VAM2 473 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 PPP2R5CQ13362 524 aa4.18□□□□□ -1.74
C11orf88-204ENST00000529661 CCDC92Q53HC0 331 aaPredicted RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms