RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 SOX11P35716 441 aa11.02□□□□□ -0.65
CMTM1-211ENST00000528484 MARCKSL1P49006 195 aa11.02□□□□□ -0.65
CMTM1-211ENST00000528484 EEF1A2Q05639 463 aaKnown RBP11.02□□□□□ -0.65
CMTM1-211ENST00000528484 SPA17Q15506 151 aa11.02□□□□□ -0.65
CMTM1-211ENST00000528484 FASTKD1Q53R41 847 aaKnown RBP11.02□□□□□ -0.65
CMTM1-211ENST00000528484 ATG9BQ674R7 924 aa11.02□□□□□ -0.65
CMTM1-211ENST00000528484 FAAH2Q6GMR7 532 aa11.02□□□□□ -0.65
CMTM1-211ENST00000528484 LMNTD1Q8N9Z9 388 aa11.02□□□□□ -0.65
CMTM1-211ENST00000528484 OR6P1Q8NGX9 317 aa11.02□□□□□ -0.65
CMTM1-211ENST00000528484 RAD51AP1Q96B01 352 aa11.02□□□□□ -0.65
CMTM1-211ENST00000528484 MVB12AQ96EY5 273 aa11.02□□□□□ -0.65
CMTM1-211ENST00000528484 CALR3Q96L12 384 aaKnown RBP11.02□□□□□ -0.65
CMTM1-211ENST00000528484 ZNF285Q96NJ3 590 aa11.02□□□□□ -0.65
CMTM1-211ENST00000528484 TAAR6Q96RI8 345 aa11.02□□□□□ -0.65
CMTM1-211ENST00000528484 RNF32Q9H0A6 362 aa11.02□□□□□ -0.65
CMTM1-211ENST00000528484 GPAMQ9HCL2 828 aa11.02□□□□□ -0.65
CMTM1-211ENST00000528484 ENAMQ9NRM1 1142 aa11.02□□□□□ -0.65
CMTM1-211ENST00000528484 UTP6Q9NYH9 597 aaKnown RBP11.02□□□□□ -0.65
CMTM1-211ENST00000528484 TRPC4Q9UBN4 977 aa11.02□□□□□ -0.65
CMTM1-211ENST00000528484 A0A0J9YVX5 310 aa11.01□□□□□ -0.65
CMTM1-211ENST00000528484 CCDC162PA2VCL2 907 aa11.01□□□□□ -0.65
CMTM1-211ENST00000528484 OR5H15A6NDH6 313 aa11.01□□□□□ -0.65
CMTM1-211ENST00000528484 IDSB3KWA1 339 aa11.01□□□□□ -0.65
CMTM1-211ENST00000528484 KPNA5O15131 536 aa11.01□□□□□ -0.65
CMTM1-211ENST00000528484 SLC19A2O60779 497 aa11.01□□□□□ -0.65
CMTM1-211ENST00000528484 PHF2O75151 1096 aa11.01□□□□□ -0.65
CMTM1-211ENST00000528484 KRT38O76015 456 aa11.01□□□□□ -0.65
CMTM1-211ENST00000528484 F10P00742 488 aa11.01□□□□□ -0.65
CMTM1-211ENST00000528484 COX6A1P12074 109 aa11.01□□□□□ -0.65
CMTM1-211ENST00000528484 FOXN2P32314 431 aa11.01□□□□□ -0.65
CMTM1-211ENST00000528484 CTNNA1P35221 906 aaKnown RBP11.01□□□□□ -0.65
CMTM1-211ENST00000528484 PTPN7P35236 360 aa11.01□□□□□ -0.65
CMTM1-211ENST00000528484 CCNFP41002 786 aa11.01□□□□□ -0.65
CMTM1-211ENST00000528484 NAP1L1P55209 391 aaKnown RBP11.01□□□□□ -0.65
CMTM1-211ENST00000528484 RWDD2BP57060 319 aa11.01□□□□□ -0.65
CMTM1-211ENST00000528484 PRAMEP78395 509 aa11.01□□□□□ -0.65
CMTM1-211ENST00000528484 ZNF33BQ06732 778 aa11.01□□□□□ -0.65
CMTM1-211ENST00000528484 HIBCHQ6NVY1 386 aaPredicted RBP11.01□□□□□ -0.65
CMTM1-211ENST00000528484 EID3Q8N140 333 aa11.01□□□□□ -0.65
CMTM1-211ENST00000528484 METTL21AQ8WXB1 218 aa11.01□□□□□ -0.65
CMTM1-211ENST00000528484 KRT35Q92764 455 aa11.01□□□□□ -0.65
CMTM1-211ENST00000528484 IL17FQ96PD4 163 aa11.01□□□□□ -0.65
CMTM1-211ENST00000528484 PANX3Q96QZ0 392 aa11.01□□□□□ -0.65
CMTM1-211ENST00000528484 MIPEPQ99797 713 aa11.01□□□□□ -0.65
CMTM1-211ENST00000528484 FAM118BQ9BPY3 351 aa11.01□□□□□ -0.65
CMTM1-211ENST00000528484 ZFYVE21Q9BQ24 234 aa11.01□□□□□ -0.65
CMTM1-211ENST00000528484 CARD6Q9BX69 1037 aa11.01□□□□□ -0.65
CMTM1-211ENST00000528484 CIDEBQ9UHD4 219 aa11.01□□□□□ -0.65
CMTM1-211ENST00000528484 HIVEP1P15822 2718 aa11.01□□□□□ -0.65
CMTM1-211ENST00000528484 PCNX1Q96RV3 2341 aa11.01□□□□□ -0.65
CMTM1-211ENST00000528484 IGHV1-45A0A0A0MS14 117 aa11□□□□□ -0.65
CMTM1-211ENST00000528484 RCCD1A6NED2 376 aa11□□□□□ -0.65
CMTM1-211ENST00000528484 MROH6A6NGR9 719 aa11□□□□□ -0.65
CMTM1-211ENST00000528484 OR51F1A6NGY5 319 aa11□□□□□ -0.65
CMTM1-211ENST00000528484 OR1I1O60431 355 aa11□□□□□ -0.65
CMTM1-211ENST00000528484 IPO7O95373 1038 aaKnown RBP11□□□□□ -0.65
CMTM1-211ENST00000528484 CLDN14O95500 239 aa11□□□□□ -0.65
CMTM1-211ENST00000528484 WDPCPO95876 746 aa11□□□□□ -0.65
CMTM1-211ENST00000528484 GOT2P00505 430 aaKnown RBP11□□□□□ -0.65
CMTM1-211ENST00000528484 CMPK1P30085 196 aa11□□□□□ -0.65
CMTM1-211ENST00000528484 CCR7P32248 378 aa11□□□□□ -0.65
CMTM1-211ENST00000528484 EMP3P54852 163 aa11□□□□□ -0.65
CMTM1-211ENST00000528484 CDH17Q12864 832 aa11□□□□□ -0.65
CMTM1-211ENST00000528484 DSG2Q14126 1118 aa11□□□□□ -0.65
CMTM1-211ENST00000528484 CCDC38Q502W7 563 aa11□□□□□ -0.65
CMTM1-211ENST00000528484 KCTD11Q693B1 232 aa11□□□□□ -0.65
CMTM1-211ENST00000528484 PTRHD1Q6GMV3 140 aaKnown RBP11□□□□□ -0.65
CMTM1-211ENST00000528484 PPP1R21Q6ZMI0 780 aa11□□□□□ -0.65
CMTM1-211ENST00000528484 CEP97Q8IW35 865 aa11□□□□□ -0.65
CMTM1-211ENST00000528484 FAM71DQ8N9W8 422 aa11□□□□□ -0.65
CMTM1-211ENST00000528484 OR4L1Q8NH43 312 aa11□□□□□ -0.65
CMTM1-211ENST00000528484 HDAC10Q969S8 669 aa11□□□□□ -0.65
CMTM1-211ENST00000528484 RERGQ96A58 199 aaPredicted RBP11□□□□□ -0.65
CMTM1-211ENST00000528484 MTFMTQ96DP5 389 aaKnown RBP11□□□□□ -0.65
CMTM1-211ENST00000528484 TUBB6Q9BUF5 446 aa11□□□□□ -0.65
CMTM1-211ENST00000528484 TRIM8Q9BZR9 551 aa11□□□□□ -0.65
CMTM1-211ENST00000528484 MKKSQ9NPJ1 570 aaPredicted RBP11□□□□□ -0.65
CMTM1-211ENST00000528484 PIH1D1Q9NWS0 290 aaKnown RBP11□□□□□ -0.65
CMTM1-211ENST00000528484 STMN3Q9NZ72 180 aa11□□□□□ -0.65
CMTM1-211ENST00000528484 C19orf25Q9UFG5 118 aaPredicted RBP11□□□□□ -0.65
CMTM1-211ENST00000528484 GNPTGQ9UJJ9 305 aa11□□□□□ -0.65
CMTM1-211ENST00000528484 TTC7AQ9ULT0 858 aaPredicted RBP11□□□□□ -0.65
CMTM1-211ENST00000528484 PCDHA3Q9Y5H8 950 aa11□□□□□ -0.65
CMTM1-211ENST00000528484 IGLV3-12A0A075B6K2 115 aa10.99□□□□□ -0.65
CMTM1-211ENST00000528484 A0A1W2PQ72 361 aa10.99□□□□□ -0.65
CMTM1-211ENST00000528484 ERI2A8K979 691 aaKnown RBP10.99□□□□□ -0.65
CMTM1-211ENST00000528484 AKR1B15C9JRZ8 316 aaPredicted RBP10.99□□□□□ -0.65
CMTM1-211ENST00000528484 E7EVH7 732 aa10.99□□□□□ -0.65
CMTM1-211ENST00000528484 FAM227AF5H4B4 570 aa10.99□□□□□ -0.65
CMTM1-211ENST00000528484 TXNDC9O14530 226 aa10.99□□□□□ -0.65
CMTM1-211ENST00000528484 FANCGO15287 622 aa10.99□□□□□ -0.65
CMTM1-211ENST00000528484 TTI1O43156 1089 aa10.99□□□□□ -0.65
CMTM1-211ENST00000528484 CTSVO60911 334 aa10.99□□□□□ -0.65
CMTM1-211ENST00000528484 GPC4O75487 556 aa10.99□□□□□ -0.65
CMTM1-211ENST00000528484 TTPAP49638 278 aa10.99□□□□□ -0.65
CMTM1-211ENST00000528484 KRTCAP3Q53RY4 240 aa10.99□□□□□ -0.65
CMTM1-211ENST00000528484 ZNF766Q5HY98 468 aa10.99□□□□□ -0.65
CMTM1-211ENST00000528484 GARNL3Q5VVW2 1013 aa10.99□□□□□ -0.65
CMTM1-211ENST00000528484 FRMPD2BQ6IN97 320 aa10.99□□□□□ -0.65
CMTM1-211ENST00000528484 NEK10Q6ZWH5 1172 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms