RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 SLC38A9Q8NBW4 561 aa8.72□□□□□ -1.01
CMTM1-210ENST00000528441 OR2L3Q8NG85 312 aa8.72□□□□□ -1.01
CMTM1-210ENST00000528441 MCOLN3Q8TDD5 553 aa8.72□□□□□ -1.01
CMTM1-210ENST00000528441 ZNF592Q92610 1267 aa8.72□□□□□ -1.01
CMTM1-210ENST00000528441 LINGO1Q96FE5 620 aa8.72□□□□□ -1.01
CMTM1-210ENST00000528441 SIGLEC10Q96LC7 697 aa8.72□□□□□ -1.01
CMTM1-210ENST00000528441 PKP4Q99569 1192 aa8.72□□□□□ -1.01
CMTM1-210ENST00000528441 AARSD1Q9BTE6 412 aaKnown RBP8.72□□□□□ -1.01
CMTM1-210ENST00000528441 DHRS4Q9BTZ2 278 aa8.72□□□□□ -1.01
CMTM1-210ENST00000528441 CUTCQ9NTM9 273 aa8.72□□□□□ -1.01
CMTM1-210ENST00000528441 GALPQ9UBC7 116 aa8.72□□□□□ -1.01
CMTM1-210ENST00000528441 TUBD1Q9UJT1 453 aa8.72□□□□□ -1.01
CMTM1-210ENST00000528441 CDC23Q9UJX2 597 aa8.72□□□□□ -1.01
CMTM1-210ENST00000528441 TLK1Q9UKI8 766 aa8.72□□□□□ -1.01
CMTM1-210ENST00000528441 TCFL5Q9UL49 500 aa8.72□□□□□ -1.01
CMTM1-210ENST00000528441 UTP11Q9Y3A2 253 aaKnown RBP8.72□□□□□ -1.01
CMTM1-210ENST00000528441 NEU2Q9Y3R4 380 aa8.72□□□□□ -1.01
CMTM1-210ENST00000528441 PCDHGA6Q9Y5G7 932 aa8.72□□□□□ -1.01
CMTM1-210ENST00000528441 KCNMB2Q9Y691 235 aa8.72□□□□□ -1.01
CMTM1-210ENST00000528441 MAU2Q9Y6X3 613 aa8.72□□□□□ -1.01
CMTM1-210ENST00000528441 SNRNP200O75643 2136 aaKnown RBP8.72□□□□□ -1.01
CMTM1-210ENST00000528441 A0A1B0GX78 115 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 ZIC2O95409 532 aaPredicted RBP8.71□□□□□ -1.02
CMTM1-210ENST00000528441 ANXA5P08758 320 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 TPBGLP0DKB5 382 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 RORAP35398 523 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 GRK3P35626 688 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 CLCN7P51798 805 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 PGDP52209 483 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 PMS2P54278 862 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 OCA2Q04671 838 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 CKAP4Q07065 602 aaKnown RBP8.71□□□□□ -1.02
CMTM1-210ENST00000528441 ATP1A4Q13733 1029 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 RBBP7Q16576 425 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 NKAIN1Q4KMZ8 207 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 CRTC2Q53ET0 693 aaPredicted RBP8.71□□□□□ -1.02
CMTM1-210ENST00000528441 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.71□□□□□ -1.02
CMTM1-210ENST00000528441 WASHC2DQ5SRD0 308 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 MFSD4BQ5TF39 518 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 LCN10Q6JVE6 187 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 FAM45BPQ6NSW5 357 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 RHBDD2Q6NTF9 364 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 FAM198BQ6UWH4 519 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 NEK10Q6ZWH5 1172 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 CREG2Q8IUH2 290 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 ZBED8Q8IZ13 594 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 DNAJC22Q8N4W6 341 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 CLEC1AQ8NC01 280 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 C2CD4AQ8NCU7 369 aaPredicted RBP8.71□□□□□ -1.02
CMTM1-210ENST00000528441 FBXO36Q8NEA4 188 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 FAM45AQ8TCE6 357 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 CD200R1Q8TD46 325 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 CDKL2Q92772 493 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 ZUFSPQ96AP4 578 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 VPS50Q96JG6 964 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 FER1L6-AS2Q96M78 137 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 PWWP2AQ96N64 755 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 SLC30A3Q99726 388 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 ZFYVE21Q9BQ24 234 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 DPH7Q9BTV6 452 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 ING2Q9H160 280 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 SOX17Q9H6I2 414 aaPredicted RBP8.71□□□□□ -1.02
CMTM1-210ENST00000528441 SAYSD1Q9NPB0 183 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 CCDC177Q9NQR7 707 aaPredicted RBP8.71□□□□□ -1.02
CMTM1-210ENST00000528441 SLC17A6Q9P2U8 582 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 DHRS7Q9Y394 339 aa8.71□□□□□ -1.02
CMTM1-210ENST00000528441 HYKKA2RU49 373 aa8.7□□□□□ -1.02
CMTM1-210ENST00000528441 FAM187AA6NFU0 413 aa8.7□□□□□ -1.02
CMTM1-210ENST00000528441 TARM1B6A8C7 271 aa8.7□□□□□ -1.02
CMTM1-210ENST00000528441 DSCR3O14972 297 aa8.7□□□□□ -1.02
CMTM1-210ENST00000528441 PRPF4O43172 522 aaKnown RBP eCLIP8.7□□□□□ -1.02
CMTM1-210ENST00000528441 HCRTR1O43613 425 aa8.7□□□□□ -1.02
CMTM1-210ENST00000528441 PSIP1O75475 530 aaKnown RBP8.7□□□□□ -1.02
CMTM1-210ENST00000528441 SEC31AO94979 1220 aaKnown RBP8.7□□□□□ -1.02
CMTM1-210ENST00000528441 MATN4O95460 622 aa8.7□□□□□ -1.02
CMTM1-210ENST00000528441 GUCA1CO95843 209 aa8.7□□□□□ -1.02
CMTM1-210ENST00000528441 SERPIND1P05546 499 aa8.7□□□□□ -1.02
CMTM1-210ENST00000528441 C8GP07360 202 aa8.7□□□□□ -1.02
CMTM1-210ENST00000528441 CTSBP07858 339 aa8.7□□□□□ -1.02
CMTM1-210ENST00000528441 MSL3P1P0C860 447 aa8.7□□□□□ -1.02
CMTM1-210ENST00000528441 ITGAXP20702 1163 aa8.7□□□□□ -1.02
CMTM1-210ENST00000528441 FBLP22087 321 aaKnown RBP8.7□□□□□ -1.02
CMTM1-210ENST00000528441 SKIV2L2P42285 1042 aaKnown RBP8.7□□□□□ -1.02
CMTM1-210ENST00000528441 MAGEA3P43357 314 aa8.7□□□□□ -1.02
CMTM1-210ENST00000528441 OR1D4P47884 311 aa8.7□□□□□ -1.02
CMTM1-210ENST00000528441 IL2P60568 153 aa8.7□□□□□ -1.02
CMTM1-210ENST00000528441 KLRB1Q12918 225 aa8.7□□□□□ -1.02
CMTM1-210ENST00000528441 GRB7Q14451 532 aa8.7□□□□□ -1.02
CMTM1-210ENST00000528441 ARHGAP19Q14CB8 494 aa8.7□□□□□ -1.02
CMTM1-210ENST00000528441 NDUFA9Q16795 377 aa8.7□□□□□ -1.02
CMTM1-210ENST00000528441 MUM1Q2TAK8 710 aa8.7□□□□□ -1.02
CMTM1-210ENST00000528441 MSS51Q4VC12 460 aa8.7□□□□□ -1.02
CMTM1-210ENST00000528441 RBM20Q5T481 1227 aaKnown RBP8.7□□□□□ -1.02
CMTM1-210ENST00000528441 HECTD2Q5U5R9 776 aa8.7□□□□□ -1.02
CMTM1-210ENST00000528441 YOD1Q5VVQ6 348 aaPredicted RBP8.7□□□□□ -1.02
CMTM1-210ENST00000528441 PRAMEF13Q5VWM6 474 aa8.7□□□□□ -1.02
CMTM1-210ENST00000528441 ICE2Q659A1 982 aa8.7□□□□□ -1.02
CMTM1-210ENST00000528441 FCRL6Q6DN72 434 aa8.7□□□□□ -1.02
CMTM1-210ENST00000528441 ZNF549Q6P9A3 640 aa8.7□□□□□ -1.02
CMTM1-210ENST00000528441 SHISA6Q6ZSJ9 500 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms