RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 OR9A1PQ8NGU1 263 aa11.16□□□□□ -0.62
CCDC90B-210ENST00000528149 DENND1AQ8TEH3 1009 aa11.16□□□□□ -0.62
CCDC90B-210ENST00000528149 RAD51AP1Q96B01 352 aa11.16□□□□□ -0.62
CCDC90B-210ENST00000528149 AHCYL2Q96HN2 611 aaKnown RBP11.16□□□□□ -0.62
CCDC90B-210ENST00000528149 SCYL1Q96KG9 808 aa11.16□□□□□ -0.62
CCDC90B-210ENST00000528149 MENTQ9BUN1 341 aa11.16□□□□□ -0.62
CCDC90B-210ENST00000528149 SLC12A9Q9BXP2 914 aa11.16□□□□□ -0.62
CCDC90B-210ENST00000528149 SRMSQ9H3Y6 488 aa11.16□□□□□ -0.62
CCDC90B-210ENST00000528149 PARVBQ9HBI1 364 aa11.16□□□□□ -0.62
CCDC90B-210ENST00000528149 NMRAL1Q9HBL8 299 aa11.16□□□□□ -0.62
CCDC90B-210ENST00000528149 OCIAD1Q9NX40 245 aa11.16□□□□□ -0.62
CCDC90B-210ENST00000528149 FOXJ2Q9P0K8 574 aa11.16□□□□□ -0.62
CCDC90B-210ENST00000528149 RNF112Q9ULX5 631 aa11.16□□□□□ -0.62
CCDC90B-210ENST00000528149 GSAPA4D1B5 854 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 PABPN1LA6NDY0 278 aaKnown RBP11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 OR5K3A6NET4 321 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 NCF1BA6NI72 391 aaPredicted RBP11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 NCF1CA8MVU1 366 aaPredicted RBP11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 SUPT3HB4E1H0 165 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 BTN3A3O00478 584 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 SUPT3HO75486 399 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 SLC16A8O95907 504 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 NCF1P14598 390 aaPredicted RBP11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 POLR2CP19387 275 aaPredicted RBP11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 POU3F2P20265 443 aaPredicted RBP11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 PSMB5P28074 263 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 PEBP1P30086 187 aaKnown RBP11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 SHMT2P34897 504 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 SLC26A3P40879 764 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 RAB28P51157 221 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 GPLD1P80108 840 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 ZFP36L1Q07352 338 aaKnown RBP11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 TSTA3Q13630 321 aaPredicted RBP11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 FASTKQ14296 549 aaKnown RBP11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 TECRLQ5HYJ1 363 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 IRGCQ6NXR0 463 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 KLC3Q6P597 504 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 AMIGO1Q86WK6 493 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 OOSP2Q86WS3 158 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 ADGRF3Q8IZF5 1079 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 LINC01555Q8NAE3 123 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 FBXO15Q8NCQ5 510 aaPredicted RBP11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 MAGEC3Q8TD91 643 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 MCOLN3Q8TDD5 553 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 ACMSDQ8TDX5 336 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 ZFPM2Q8WW38 1151 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 ANKRD7Q92527 254 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 NCSTNQ92542 709 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 KIAA1191Q96A73 305 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 CABS1Q96KC9 395 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 TSNARE1Q96NA8 513 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 GPR78Q96P69 363 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 EGFL8Q99944 293 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 RAB11FIP5Q9BXF6 653 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 TFB2MQ9H5Q4 396 aaKnown RBP11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 APMAPQ9HDC9 416 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 GEMIN8Q9NWZ8 242 aaKnown RBP11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 ARL15Q9NXU5 204 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 SPATA7Q9P0W8 599 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 STOX2Q9P2F5 926 aaPredicted RBP11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 XPR1Q9UBH6 696 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 PISDQ9UG56 409 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 LOXL2Q9Y4K0 774 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 OARD1Q9Y530 152 aa11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 RP1L1Q8IWN7 2480 aaPredicted RBP11.15□□□□□ -0.62
CCDC90B-210ENST00000528149 CELSR2Q9HCU4 2923 aa11.15□□□□□ -0.63
CCDC90B-210ENST00000528149 ZFHX3Q15911 3703 aa11.14□□□□□ -0.63
CCDC90B-210ENST00000528149 SPTBP11277 2137 aa11.14□□□□□ -0.63
CCDC90B-210ENST00000528149 SETD2Q9BYW2 2564 aaPredicted RBP11.14□□□□□ -0.63
CCDC90B-210ENST00000528149 UBXN8O00124 270 aa11.14□□□□□ -0.63
CCDC90B-210ENST00000528149 KDM1AO60341 852 aa11.14□□□□□ -0.63
CCDC90B-210ENST00000528149 PRAMEF10O60809 474 aa11.14□□□□□ -0.63
CCDC90B-210ENST00000528149 KERAO60938 352 aa11.14□□□□□ -0.63
CCDC90B-210ENST00000528149 SASH3O75995 380 aa11.14□□□□□ -0.63
CCDC90B-210ENST00000528149 CHRM5P08912 532 aaPredicted RBP11.14□□□□□ -0.63
CCDC90B-210ENST00000528149 ENO2P09104 434 aaPredicted RBP11.14□□□□□ -0.63
CCDC90B-210ENST00000528149 THRAP10827 490 aa11.14□□□□□ -0.63
CCDC90B-210ENST00000528149 ERGP11308 486 aa11.14□□□□□ -0.63
CCDC90B-210ENST00000528149 KRT4P19013 534 aa11.14□□□□□ -0.63
CCDC90B-210ENST00000528149 IMPA1P29218 277 aa11.14□□□□□ -0.63
CCDC90B-210ENST00000528149 PNLIPRP1P54315 467 aa11.14□□□□□ -0.63
CCDC90B-210ENST00000528149 CYP4F2P78329 520 aa11.14□□□□□ -0.63
CCDC90B-210ENST00000528149 TGFBIQ15582 683 aa11.14□□□□□ -0.63
CCDC90B-210ENST00000528149 TSNAXIP1Q2TAA8 658 aa11.14□□□□□ -0.63
CCDC90B-210ENST00000528149 C18orf21Q32NC0 220 aaPredicted RBP11.14□□□□□ -0.63
CCDC90B-210ENST00000528149 FBXO48Q5FWF7 155 aa11.14□□□□□ -0.63
CCDC90B-210ENST00000528149 ANKS6Q68DC2 871 aa11.14□□□□□ -0.63
CCDC90B-210ENST00000528149 ARMC6Q6NXE6 501 aa11.14□□□□□ -0.63
CCDC90B-210ENST00000528149 C16orf46Q6P387 395 aa11.14□□□□□ -0.63
CCDC90B-210ENST00000528149 FAM92BQ6ZTR7 304 aa11.14□□□□□ -0.63
CCDC90B-210ENST00000528149 SH2D5Q6ZV89 423 aa11.14□□□□□ -0.63
CCDC90B-210ENST00000528149 HDXQ7Z353 690 aa11.14□□□□□ -0.63
CCDC90B-210ENST00000528149 ISCA2Q86U28 154 aa11.14□□□□□ -0.63
CCDC90B-210ENST00000528149 TRIM73Q86UV7 250 aa11.14□□□□□ -0.63
CCDC90B-210ENST00000528149 GPSM1Q86YR5 675 aa11.14□□□□□ -0.63
CCDC90B-210ENST00000528149 FAM20CQ8IXL6 584 aa11.14□□□□□ -0.63
CCDC90B-210ENST00000528149 SYTL1Q8IYJ3 562 aa11.14□□□□□ -0.63
CCDC90B-210ENST00000528149 RAB42Q8N4Z0 105 aa11.14□□□□□ -0.63
CCDC90B-210ENST00000528149 OR2L8Q8NGY9 312 aa11.14□□□□□ -0.63
CCDC90B-210ENST00000528149 ZNF480Q8WV37 535 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms