RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 RUVBL1Q9Y265 456 aaKnown RBP14.9□□□□□ -0.02
USH1C-207ENST00000527720 WNT6Q9Y6F9 365 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 SLC5A10A0PJK1 596 aa14.89□□□□□ -0.03
USH1C-207ENST00000527720 EVPLLA8MZ36 301 aa14.89□□□□□ -0.03
USH1C-207ENST00000527720 PRKD3O94806 890 aa14.89□□□□□ -0.03
USH1C-207ENST00000527720 BMPR1AP36894 532 aa14.89□□□□□ -0.03
USH1C-207ENST00000527720 XKR6Q5GH73 641 aa14.89□□□□□ -0.03
USH1C-207ENST00000527720 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.89□□□□□ -0.03
USH1C-207ENST00000527720 GRHL2Q6ISB3 625 aa14.89□□□□□ -0.03
USH1C-207ENST00000527720 LIPIQ6XZB0 460 aa14.89□□□□□ -0.03
USH1C-207ENST00000527720 EID3Q8N140 333 aa14.89□□□□□ -0.03
USH1C-207ENST00000527720 ZCCHC7Q8N3Z6 543 aaKnown RBP14.89□□□□□ -0.03
USH1C-207ENST00000527720 KIAA1958Q8N8K9 716 aa14.89□□□□□ -0.03
USH1C-207ENST00000527720 NAT16Q8N8M0 369 aa14.89□□□□□ -0.03
USH1C-207ENST00000527720 PJA1Q8NG27 643 aa14.89□□□□□ -0.03
USH1C-207ENST00000527720 RBM4BQ9BQ04 359 aaKnown RBP14.89□□□□□ -0.03
USH1C-207ENST00000527720 INPP5KQ9BT40 448 aa14.89□□□□□ -0.03
USH1C-207ENST00000527720 RBM4Q9BWF3 364 aaKnown RBP14.89□□□□□ -0.03
USH1C-207ENST00000527720 OSBPL10Q9BXB5 764 aa14.89□□□□□ -0.03
USH1C-207ENST00000527720 FAM120CQ9NX05 1096 aaKnown RBP14.89□□□□□ -0.03
USH1C-207ENST00000527720 TSPAN6O43657 245 aa14.89□□□□□ -0.03
USH1C-207ENST00000527720 FGBP02675 491 aa14.89□□□□□ -0.03
USH1C-207ENST00000527720 ELFN1P0C7U0 828 aa14.89□□□□□ -0.03
USH1C-207ENST00000527720 HLCSP50747 726 aa14.89□□□□□ -0.03
USH1C-207ENST00000527720 CBX2Q14781 532 aaPredicted RBP14.89□□□□□ -0.03
USH1C-207ENST00000527720 DUOXA1Q1HG43 343 aa14.89□□□□□ -0.03
USH1C-207ENST00000527720 SLC44A4Q53GD3 710 aa14.89□□□□□ -0.03
USH1C-207ENST00000527720 AGTRAPQ6RW13 159 aa14.89□□□□□ -0.03
USH1C-207ENST00000527720 SYT12Q8IV01 421 aa14.89□□□□□ -0.03
USH1C-207ENST00000527720 PGBD3Q8N328 593 aa14.89□□□□□ -0.03
USH1C-207ENST00000527720 RASGEF1AQ8N9B8 481 aa14.89□□□□□ -0.03
USH1C-207ENST00000527720 OR8J2Q8NGG1 315 aa14.89□□□□□ -0.03
USH1C-207ENST00000527720 SORCS1Q8WY21 1168 aa14.89□□□□□ -0.03
USH1C-207ENST00000527720 DTNBP1Q96EV8 351 aa14.89□□□□□ -0.03
USH1C-207ENST00000527720 FOPNLQ96NB1 174 aa14.89□□□□□ -0.03
USH1C-207ENST00000527720 HPS4Q9NQG7 708 aa14.89□□□□□ -0.03
USH1C-207ENST00000527720 DDX18Q9NVP1 670 aaKnown RBP14.89□□□□□ -0.03
USH1C-207ENST00000527720 STOX2Q9P2F5 926 aaPredicted RBP14.89□□□□□ -0.03
USH1C-207ENST00000527720 PCM1Q15154 2024 aa14.88□□□□□ -0.03
USH1C-207ENST00000527720 GNGT2O14610 69 aa14.88□□□□□ -0.03
USH1C-207ENST00000527720 ZNF197O14709 1029 aa14.88□□□□□ -0.03
USH1C-207ENST00000527720 CCNDBP1O95273 360 aa14.88□□□□□ -0.03
USH1C-207ENST00000527720 CD22P20273 847 aa14.88□□□□□ -0.03
USH1C-207ENST00000527720 RPL10P27635 214 aaKnown RBP14.88□□□□□ -0.03
USH1C-207ENST00000527720 CTNNB1P35222 781 aa14.88□□□□□ -0.03
USH1C-207ENST00000527720 HTRA3P83110 453 aa14.88□□□□□ -0.03
USH1C-207ENST00000527720 PPP2R2BQ00005 443 aa14.88□□□□□ -0.03
USH1C-207ENST00000527720 UBE3AQ05086 875 aa14.88□□□□□ -0.03
USH1C-207ENST00000527720 TMEM115Q12893 351 aaPredicted RBP14.88□□□□□ -0.03
USH1C-207ENST00000527720 SLC22A15Q8IZD6 547 aa14.88□□□□□ -0.03
USH1C-207ENST00000527720 TERB1Q8NA31 727 aa14.88□□□□□ -0.03
USH1C-207ENST00000527720 FBXO15Q8NCQ5 510 aaPredicted RBP14.88□□□□□ -0.03
USH1C-207ENST00000527720 OR56A3Q8NH54 315 aa14.88□□□□□ -0.03
USH1C-207ENST00000527720 OR5K1Q8NHB7 308 aa14.88□□□□□ -0.03
USH1C-207ENST00000527720 NETO1Q8TDF5 533 aa14.88□□□□□ -0.03
USH1C-207ENST00000527720 POF1BQ8WVV4 589 aa14.88□□□□□ -0.03
USH1C-207ENST00000527720 MYLIPQ8WY64 445 aa14.88□□□□□ -0.03
USH1C-207ENST00000527720 TBC1D20Q96BZ9 403 aa14.88□□□□□ -0.03
USH1C-207ENST00000527720 AP2M1Q96CW1 435 aa14.88□□□□□ -0.03
USH1C-207ENST00000527720 PYURFQ96I23 114 aa14.88□□□□□ -0.03
USH1C-207ENST00000527720 RAD9AQ99638 391 aa14.88□□□□□ -0.03
USH1C-207ENST00000527720 NPLQ9BXD5 320 aaPredicted RBP14.88□□□□□ -0.03
USH1C-207ENST00000527720 THG1LQ9NWX6 298 aaKnown RBP14.88□□□□□ -0.03
USH1C-207ENST00000527720 SAMD4AQ9UPU9 718 aaKnown RBP14.88□□□□□ -0.03
USH1C-207ENST00000527720 DENND4AQ7Z401 1863 aa14.88□□□□□ -0.03
USH1C-207ENST00000527720 TMEM202A6NGA9 273 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 MYO1DO94832 1006 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 SERPINA1P01009 418 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 CISD3P0C7P0 127 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 CDKN2CP42773 168 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 DGKGP49619 791 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 CCR3P51677 355 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 CTSCP53634 463 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 PNLIPRP1P54315 467 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 BIRC2Q13490 618 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 DOC2AQ14183 400 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 E2F2Q14209 437 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 DHCR24Q15392 516 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 OR4F3Q6IEY1 312 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 ERICH5Q6P6B1 374 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 ANKRD46Q86W74 232 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 SPPL3Q8TCT6 385 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 C11orf24Q96F05 449 aaPredicted RBP14.87□□□□□ -0.03
USH1C-207ENST00000527720 EGLN2Q96KS0 407 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 MUS81Q96NY9 551 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 GPRC5BQ9NZH0 403 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 NUP214P35658 2090 aaPredicted RBP14.87□□□□□ -0.03
USH1C-207ENST00000527720 E7EQ34 232 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 GSNP06396 782 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 POU2F2P09086 479 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 PCSK6P29122 969 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 MAGEA2P43356 314 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 ASMTP46597 345 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 ST8SIA6P61647 398 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 ACOX1Q15067 660 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 RBM48Q5RL73 367 aaKnown RBP14.87□□□□□ -0.03
USH1C-207ENST00000527720 DOK6Q6PKX4 331 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 NLRP8Q86W28 1048 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 ZNF555Q8NEP9 628 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 ZNF420Q8TAQ5 688 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms