RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 C16orf52Q8NHV5 167 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 FIBINQ8TAL6 211 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 ACTRT1Q8TDG2 376 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 CSGALNACT1Q8TDX6 532 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 RSC1A1Q92681 617 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 P3H4Q92791 437 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 ATP2A3Q93084 1043 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 COQ8BQ96D53 544 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 MS4A14Q96JA4 679 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 CSPG4P5Q96PW8 444 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 XPO6Q96QU8 1125 aaKnown RBP4.47□□□□□ -1.69
USP48-211ENST00000526044 NAP1L3Q99457 506 aaPredicted RBP4.47□□□□□ -1.69
USP48-211ENST00000526044 BARD1Q99728 777 aaKnown RBP4.47□□□□□ -1.69
USP48-211ENST00000526044 ZNF670Q9BS34 389 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 GATA5Q9BWX5 397 aaPredicted RBP4.47□□□□□ -1.69
USP48-211ENST00000526044 BBS2Q9BXC9 721 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 AP1M1Q9BXS5 423 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 EBF3Q9H4W6 596 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 ECT2Q9H8V3 914 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 HOMER3Q9NSC5 361 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 TMEM248Q9NWD8 314 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 TRNAU1APQ9NX07 287 aaKnown RBP4.47□□□□□ -1.69
USP48-211ENST00000526044 ACAD8Q9UKU7 415 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 TRANK1O15050 2925 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 KIF26AQ9ULI4 1882 aaPredicted RBP4.47□□□□□ -1.69
USP48-211ENST00000526044 DOCK4Q8N1I0 1966 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 TCF20Q9UGU0 1960 aaKnown RBP4.47□□□□□ -1.69
USP48-211ENST00000526044 DOCK8Q8NF50 2099 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 hCG_1818297A0A087WSY0 165 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 LOC105369274A0A096LPK9 316 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 LOC102723532A0A0G2JNH3 316 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 A0A1B0GVM2 712 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 ILVBLA1L0T0 632 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 NEDD8-MDP1E9PL57 170 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 NCAM2O15394 837 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 NKX2-8O15522 239 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 TMCC2O75069 709 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 LUC7L3O95232 432 aaKnown RBP4.46□□□□□ -1.7
USP48-211ENST00000526044 FGGP02679 453 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 RHOCP08134 193 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 ARSAP15289 507 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 TGM2P21980 687 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 HOXD9P28356 352 aaPredicted RBP4.46□□□□□ -1.7
USP48-211ENST00000526044 AKT1P31749 480 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 PTGER1P34995 402 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 SERPINB6P35237 376 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 THBS4P35443 961 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 GRK6P43250 576 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 RAD52P43351 418 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 CPA2P48052 419 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 NR2C2P49116 596 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 NDST2P52849 883 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 SLC12A2P55011 1212 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 VCPP55072 806 aaKnown RBP4.46□□□□□ -1.7
USP48-211ENST00000526044 POLE2P56282 527 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 YBEYP58557 167 aaPredicted RBP4.46□□□□□ -1.7
USP48-211ENST00000526044 DYNLT1P63172 113 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 TDGQ13569 410 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 SLC12A1Q13621 1099 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 CDH18Q13634 790 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 DPYSQ14117 519 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 PAFAH1B3Q15102 231 aaKnown RBP4.46□□□□□ -1.7
USP48-211ENST00000526044 PFKFB4Q16877 469 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 C10orf25Q5T742 122 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 RETSATQ6NUM9 610 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 BBS12Q6ZW61 710 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 CHST9Q7L1S5 443 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 ANKS1BQ7Z6G8 1248 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 SETD3Q86TU7 594 aaPredicted RBP4.46□□□□□ -1.7
USP48-211ENST00000526044 NLRP14Q86W24 1093 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 MFN1Q8IWA4 741 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 OR4N4Q8N0Y3 316 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 NDUFAF2Q8N183 169 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 UMODL1-AS1Q8N2C9 162 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 PQLC3Q8N755 202 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 PLD5Q8N7P1 536 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 NANOGP1Q8N7R0 232 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 NKAIN3Q8N8D7 197 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 CCNYQ8ND76 341 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 STYXQ8WUJ0 223 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 EXOC4Q96A65 974 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 FAF2Q96CS3 445 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 REXO5Q96IC2 774 aaKnown RBP4.46□□□□□ -1.7
USP48-211ENST00000526044 CAPZA3Q96KX2 299 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 PRICKLE1Q96MT3 831 aaPredicted RBP4.46□□□□□ -1.7
USP48-211ENST00000526044 SLC2A11Q9BYW1 496 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 FRMD8P1Q9BZ68 369 aaPredicted RBP4.46□□□□□ -1.7
USP48-211ENST00000526044 SLC39A8Q9C0K1 460 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 SPRTNQ9H040 489 aaPredicted RBP4.46□□□□□ -1.7
USP48-211ENST00000526044 MAGEH1Q9H213 219 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 C8orf33Q9H7E9 229 aaPredicted RBP4.46□□□□□ -1.7
USP48-211ENST00000526044 MLXIPLQ9NP71 852 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 TRPV5Q9NQA5 729 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 HPS4Q9NQG7 708 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 TMEM184CQ9NVA4 438 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 ETNK2Q9NVF9 386 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 PLK2Q9NYY3 685 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 GTSE1Q9NYZ3 720 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 DEC1Q9P2X7 70 aa4.46□□□□□ -1.7
USP48-211ENST00000526044 TTC7AQ9ULT0 858 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms