RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 SMG1Q96Q15 3661 aaKnown RBP16.8■□□□□ 0.28
NR1H3-228ENST00000525441 PABPN1LA6NDY0 278 aaKnown RBP16.8■□□□□ 0.28
NR1H3-228ENST00000525441 EIF3HO15372 352 aaKnown RBP eCLIP16.8■□□□□ 0.28
NR1H3-228ENST00000525441 SLC16A5O15375 505 aa16.8■□□□□ 0.28
NR1H3-228ENST00000525441 CAPN1P07384 714 aa16.8■□□□□ 0.28
NR1H3-228ENST00000525441 CDKN2DP55273 166 aa16.8■□□□□ 0.28
NR1H3-228ENST00000525441 IL2P60568 153 aa16.8■□□□□ 0.28
NR1H3-228ENST00000525441 ABATP80404 500 aa16.8■□□□□ 0.28
NR1H3-228ENST00000525441 TIAL1Q01085 375 aaKnown RBP eCLIP16.8■□□□□ 0.28
NR1H3-228ENST00000525441 ILF2Q12905 390 aaKnown RBP16.8■□□□□ 0.28
NR1H3-228ENST00000525441 HECTD2Q5U5R9 776 aa16.8■□□□□ 0.28
NR1H3-228ENST00000525441 DUPD1Q68J44 220 aa16.8■□□□□ 0.28
NR1H3-228ENST00000525441 PAQR3Q6TCH7 311 aa16.8■□□□□ 0.28
NR1H3-228ENST00000525441 SUSD1Q6UWL2 747 aa16.8■□□□□ 0.28
NR1H3-228ENST00000525441 C9orf43Q8TAL5 461 aaPredicted RBP16.8■□□□□ 0.28
NR1H3-228ENST00000525441 PYROXD1Q8WU10 500 aa16.8■□□□□ 0.28
NR1H3-228ENST00000525441 EEF1AKMT1Q8WVE0 214 aa16.8■□□□□ 0.28
NR1H3-228ENST00000525441 LINGO1Q96FE5 620 aa16.8■□□□□ 0.28
NR1H3-228ENST00000525441 DPH7Q9BTV6 452 aa16.8■□□□□ 0.28
NR1H3-228ENST00000525441 ENAMQ9NRM1 1142 aa16.8■□□□□ 0.28
NR1H3-228ENST00000525441 IFT80Q9P2H3 777 aaPredicted RBP16.8■□□□□ 0.28
NR1H3-228ENST00000525441 SLC17A6Q9P2U8 582 aa16.8■□□□□ 0.28
NR1H3-228ENST00000525441 DHCR7Q9UBM7 475 aaKnown RBP16.8■□□□□ 0.28
NR1H3-228ENST00000525441 NDOR1Q9UHB4 597 aa16.8■□□□□ 0.28
NR1H3-228ENST00000525441 TAC3Q9UHF0 121 aa16.8■□□□□ 0.28
NR1H3-228ENST00000525441 ZNF462Q96JM2 2506 aa16.79■□□□□ 0.28
NR1H3-228ENST00000525441 CFAP46Q8IYW2 2715 aa16.79■□□□□ 0.28
NR1H3-228ENST00000525441 OR2A25A4D2G3 310 aa16.79■□□□□ 0.28
NR1H3-228ENST00000525441 E7ENX8 843 aa16.79■□□□□ 0.28
NR1H3-228ENST00000525441 MKRN2OSH3BPM6 223 aa16.79■□□□□ 0.28
NR1H3-228ENST00000525441 CTSVO60911 334 aa16.79■□□□□ 0.28
NR1H3-228ENST00000525441 RFPL1O75677 317 aa16.79■□□□□ 0.28
NR1H3-228ENST00000525441 CTSBP07858 339 aa16.79■□□□□ 0.28
NR1H3-228ENST00000525441 PIM1P11309 404 aaPredicted RBP16.79■□□□□ 0.28
NR1H3-228ENST00000525441 ALAS2P22557 587 aa16.79■□□□□ 0.28
NR1H3-228ENST00000525441 PMS2P54278 862 aa16.79■□□□□ 0.28
NR1H3-228ENST00000525441 VSX2P58304 361 aaPredicted RBP16.79■□□□□ 0.28
NR1H3-228ENST00000525441 CAV1Q03135 178 aa16.79■□□□□ 0.28
NR1H3-228ENST00000525441 TAP2Q03519 686 aa16.79■□□□□ 0.28
NR1H3-228ENST00000525441 PRDX1Q06830 199 aaKnown RBP16.79■□□□□ 0.28
NR1H3-228ENST00000525441 IL10RAQ13651 578 aa16.79■□□□□ 0.28
NR1H3-228ENST00000525441 FASTKD3Q14CZ7 662 aaKnown RBP16.79■□□□□ 0.28
NR1H3-228ENST00000525441 FAM214AQ32MH5 1076 aa16.79■□□□□ 0.28
NR1H3-228ENST00000525441 NKAIN1Q4KMZ8 207 aa16.79■□□□□ 0.28
NR1H3-228ENST00000525441 THEMIS2Q5TEJ8 643 aa16.79■□□□□ 0.28
NR1H3-228ENST00000525441 MLIPQ5VWP3 458 aa16.79■□□□□ 0.28
NR1H3-228ENST00000525441 ICE2Q659A1 982 aa16.79■□□□□ 0.28
NR1H3-228ENST00000525441 RNF44Q7L0R7 432 aa16.79■□□□□ 0.28
NR1H3-228ENST00000525441 ZNF572Q7Z3I7 529 aaPredicted RBP16.79■□□□□ 0.28
NR1H3-228ENST00000525441 SLC26A11Q86WA9 606 aa16.79■□□□□ 0.28
NR1H3-228ENST00000525441 APLFQ8IW19 511 aaPredicted RBP16.79■□□□□ 0.28
NR1H3-228ENST00000525441 CCDC138Q96M89 665 aa16.79■□□□□ 0.28
NR1H3-228ENST00000525441 ZNF285Q96NJ3 590 aa16.79■□□□□ 0.28
NR1H3-228ENST00000525441 ZFYVE21Q9BQ24 234 aa16.79■□□□□ 0.28
NR1H3-228ENST00000525441 PLCD4Q9BRC7 762 aa16.79■□□□□ 0.28
NR1H3-228ENST00000525441 PARVBQ9HBI1 364 aa16.79■□□□□ 0.28
NR1H3-228ENST00000525441 SAYSD1Q9NPB0 183 aa16.79■□□□□ 0.28
NR1H3-228ENST00000525441 MOCS1Q9NZB8 636 aa16.79■□□□□ 0.28
NR1H3-228ENST00000525441 A0A0J9YVX5 310 aa16.78■□□□□ 0.28
NR1H3-228ENST00000525441 A0A1B0GX78 115 aa16.78■□□□□ 0.28
NR1H3-228ENST00000525441 HIST1H2AGP0C0S8 130 aaPredicted RBP16.78■□□□□ 0.28
NR1H3-228ENST00000525441 HIST1H2ADP20671 130 aa16.78■□□□□ 0.28
NR1H3-228ENST00000525441 FDXRP22570 491 aa16.78■□□□□ 0.28
NR1H3-228ENST00000525441 IMPA1P29218 277 aa16.78■□□□□ 0.28
NR1H3-228ENST00000525441 WASHC2DQ5SRD0 308 aa16.78■□□□□ 0.28
NR1H3-228ENST00000525441 TTLL10Q6ZVT0 673 aa16.78■□□□□ 0.28
NR1H3-228ENST00000525441 STRA8Q7Z7C7 330 aa16.78■□□□□ 0.28
NR1H3-228ENST00000525441 RAB43Q86YS6 212 aa16.78■□□□□ 0.28
NR1H3-228ENST00000525441 PPFIBP2Q8ND30 876 aa16.78■□□□□ 0.28
NR1H3-228ENST00000525441 CDKL2Q92772 493 aa16.78■□□□□ 0.28
NR1H3-228ENST00000525441 HIST1H2AHQ96KK5 128 aa16.78■□□□□ 0.28
NR1H3-228ENST00000525441 C16orf45Q96MC5 204 aaPredicted RBP16.78■□□□□ 0.28
NR1H3-228ENST00000525441 HIST1H2AJQ99878 128 aa16.78■□□□□ 0.28
NR1H3-228ENST00000525441 H2AFJQ9BTM1 129 aa16.78■□□□□ 0.28
NR1H3-228ENST00000525441 PCBD2Q9H0N5 130 aa16.78■□□□□ 0.28
NR1H3-228ENST00000525441 SLC6A20Q9NP91 592 aa16.78■□□□□ 0.28
NR1H3-228ENST00000525441 CCDC177Q9NQR7 707 aaPredicted RBP16.78■□□□□ 0.28
NR1H3-228ENST00000525441 CUTCQ9NTM9 273 aa16.78■□□□□ 0.28
NR1H3-228ENST00000525441 ABCF3Q9NUQ8 709 aa16.78■□□□□ 0.28
NR1H3-228ENST00000525441 CDC23Q9UJX2 597 aa16.78■□□□□ 0.28
NR1H3-228ENST00000525441 PDE10AQ9Y233 779 aa16.78■□□□□ 0.28
NR1H3-228ENST00000525441 FITM1A5D6W6 292 aa16.77■□□□□ 0.28
NR1H3-228ENST00000525441 DSCR3O14972 297 aa16.77■□□□□ 0.28
NR1H3-228ENST00000525441 FOLR3P41439 243 aa16.77■□□□□ 0.28
NR1H3-228ENST00000525441 GCGRP47871 477 aa16.77■□□□□ 0.28
NR1H3-228ENST00000525441 NFKB2Q00653 900 aa16.77■□□□□ 0.28
NR1H3-228ENST00000525441 SPNS2Q8IVW8 549 aa16.77■□□□□ 0.28
NR1H3-228ENST00000525441 ADAMTS17Q8TE56 1095 aa16.77■□□□□ 0.28
NR1H3-228ENST00000525441 ABHD17AQ96GS6 310 aa16.77■□□□□ 0.28
NR1H3-228ENST00000525441 IP6K3Q96PC2 410 aa16.77■□□□□ 0.28
NR1H3-228ENST00000525441 TRIM54Q9BYV2 358 aa16.77■□□□□ 0.28
NR1H3-228ENST00000525441 PHACTR1Q9C0D0 580 aa16.77■□□□□ 0.28
NR1H3-228ENST00000525441 GRHL1Q9NZI5 618 aa16.77■□□□□ 0.28
NR1H3-228ENST00000525441 STOX2Q9P2F5 926 aaPredicted RBP16.77■□□□□ 0.28
NR1H3-228ENST00000525441 ADAMTS6Q9UKP5 1117 aa16.77■□□□□ 0.28
NR1H3-228ENST00000525441 PTRH2Q9Y3E5 179 aaKnown RBP16.77■□□□□ 0.28
NR1H3-228ENST00000525441 PCM1Q15154 2024 aa16.76■□□□□ 0.27
NR1H3-228ENST00000525441 HYKKA2RU49 373 aa16.76■□□□□ 0.27
NR1H3-228ENST00000525441 URI1O94763 535 aaPredicted RBP16.76■□□□□ 0.27
NR1H3-228ENST00000525441 TUBB4AP04350 444 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms