RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 PRICKLE2Q7Z3G6 844 aa12.31□□□□□ -0.44
TRAPPC4-205ENST00000525079 MAATS1Q7Z4T9 603 aa12.31□□□□□ -0.44
TRAPPC4-205ENST00000525079 ZBED8Q8IZ13 594 aa12.31□□□□□ -0.44
TRAPPC4-205ENST00000525079 DTWD1Q8N5C7 304 aa12.31□□□□□ -0.44
TRAPPC4-205ENST00000525079 METTL27Q8N6F8 245 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC4-205ENST00000525079 FBXO15Q8NCQ5 510 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC4-205ENST00000525079 BBOF1Q8ND07 529 aa12.31□□□□□ -0.44
TRAPPC4-205ENST00000525079 C9orf43Q8TAL5 461 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC4-205ENST00000525079 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC4-205ENST00000525079 LINGO1Q96FE5 620 aa12.31□□□□□ -0.44
TRAPPC4-205ENST00000525079 OLFM1Q99784 485 aa12.31□□□□□ -0.44
TRAPPC4-205ENST00000525079 DPH2Q9BQC3 489 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC4-205ENST00000525079 TRIM55Q9BYV6 548 aa12.31□□□□□ -0.44
TRAPPC4-205ENST00000525079 MRPS30Q9NP92 439 aaKnown RBP12.31□□□□□ -0.44
TRAPPC4-205ENST00000525079 IFT80Q9P2H3 777 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC4-205ENST00000525079 TLK1Q9UKI8 766 aa12.31□□□□□ -0.44
TRAPPC4-205ENST00000525079 SRPK3Q9UPE1 567 aa12.31□□□□□ -0.44
TRAPPC4-205ENST00000525079 PDE10AQ9Y233 779 aa12.31□□□□□ -0.44
TRAPPC4-205ENST00000525079 PSAT1Q9Y617 370 aa12.31□□□□□ -0.44
TRAPPC4-205ENST00000525079 PCM1Q15154 2024 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 CFAP46Q8IYW2 2715 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 ZNF839A8K0R7 811 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 E7ESA3 106 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 CNOT3O75175 753 aaKnown RBP12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 MED26O95402 600 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 IMPA1P29218 277 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 OTX2P32243 289 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 HSD17B2P37059 387 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 SKIV2L2P42285 1042 aaKnown RBP12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 GCGRP47871 477 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 RGS4P49798 205 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 CCL11P51671 97 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 PMS2P54278 862 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 MGAT5Q09328 741 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 CALCOCO2Q13137 446 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 PDAP1Q13442 181 aaKnown RBP12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 GRM7Q14831 915 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 TRADDQ15628 312 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 NKAIN1Q4KMZ8 207 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 THEMIS2Q5TEJ8 643 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 ICE2Q659A1 982 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 MBOAT1Q6ZNC8 495 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 STRA8Q7Z7C7 330 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 PALM2Q8IXS6 379 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 MYO1HQ8N1T3 1032 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 TTC29Q8NA56 475 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 PROKR1Q8TCW9 393 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 MCOLN3Q8TDD5 553 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 ADAMTS17Q8TE56 1095 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 THAP4Q8WY91 577 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 SEC14L1Q92503 715 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 ALKBH8Q96BT7 664 aaKnown RBP12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 C16orf45Q96MC5 204 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 SYNPO2LQ9H987 977 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 SAYSD1Q9NPB0 183 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 SLC22A11Q9NSA0 550 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 CUTCQ9NTM9 273 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 GRHL1Q9NZI5 618 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 WHRNQ9P202 907 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 TUBD1Q9UJT1 453 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 VWA7Q9Y334 891 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 PTRH2Q9Y3E5 179 aaKnown RBP12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 KLK4Q9Y5K2 254 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 FER1L5A0AVI2 2057 aa12.3□□□□□ -0.44
TRAPPC4-205ENST00000525079 SMG1Q96Q15 3661 aaKnown RBP12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 CCDC88CQ9P219 2028 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 IGKV1-8A0A0C4DH67 115 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 OR2A25A4D2G3 310 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 H0YGG7 62 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 EIF3FO00303 357 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 SRPX2O60687 465 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 RFPL1O75677 317 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 KLF7O75840 302 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 C8GP07360 202 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 ITGAXP20702 1163 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 FDXRP22570 491 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 SSTR1P30872 391 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 OR1D4P47884 311 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 ARSFP54793 590 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 IL2P60568 153 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 ARF3P61204 181 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 PRDX1Q06830 199 aaKnown RBP12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 PHKG1Q16816 387 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 TCTE1Q5JU00 501 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 DUPD1Q68J44 220 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 FAM45BPQ6NSW5 357 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 RNF44Q7L0R7 432 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 ADCK2Q7Z695 626 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 GALNT7Q86SF2 657 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 PAQR7Q86WK9 346 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 PLD3Q8IV08 490 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 LRRC56Q8IYG6 542 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 FAM45AQ8TCE6 357 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 PYROXD1Q8WU10 500 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 ZNF285Q96NJ3 590 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 ZFYVE21Q9BQ24 234 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 PLCD4Q9BRC7 762 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 TRIM4Q9C037 500 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 ATG10Q9H0Y0 220 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 ING2Q9H160 280 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms