RNA–Protein interactions for RNA: ENST00000523814.5

SPIDR-221, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-221ENST00000523814 IGFL2Q6UWQ7 119 aa16.05■□□□□ 0.16
SPIDR-221ENST00000523814 RNF44Q7L0R7 432 aa16.05■□□□□ 0.16
SPIDR-221ENST00000523814 CILP2Q8IUL8 1156 aa16.05■□□□□ 0.16
SPIDR-221ENST00000523814 LRRC8AQ8IWT6 810 aa16.05■□□□□ 0.16
SPIDR-221ENST00000523814 INPP5DQ92835 1189 aa16.05■□□□□ 0.16
SPIDR-221ENST00000523814 DPH7Q9BTV6 452 aa16.05■□□□□ 0.16
SPIDR-221ENST00000523814 ILKAPQ9H0C8 392 aaPredicted RBP16.05■□□□□ 0.16
SPIDR-221ENST00000523814 ZNF304Q9HCX3 659 aa16.05■□□□□ 0.16
SPIDR-221ENST00000523814 INTS10Q9NVR2 710 aaKnown RBP16.05■□□□□ 0.16
SPIDR-221ENST00000523814 MAP10Q9P2G4 905 aa16.05■□□□□ 0.16
SPIDR-221ENST00000523814 KLHL42Q9P2K6 505 aa16.05■□□□□ 0.16
SPIDR-221ENST00000523814 ZC3H7BQ9UGR2 993 aaKnown RBP16.05■□□□□ 0.16
SPIDR-221ENST00000523814 FAM169AQ9Y6X4 670 aa16.05■□□□□ 0.16
SPIDR-221ENST00000523814 ESPL1Q14674 2120 aa16.04■□□□□ 0.16
SPIDR-221ENST00000523814 A0A0J9YVX5 310 aa16.04■□□□□ 0.16
SPIDR-221ENST00000523814 FAM237BA0A1B0GVD1 139 aa16.04■□□□□ 0.16
SPIDR-221ENST00000523814 ARHGEF33A8MVX0 844 aa16.04■□□□□ 0.16
SPIDR-221ENST00000523814 MYO1CO00159 1063 aa16.04■□□□□ 0.16
SPIDR-221ENST00000523814 NRP2O60462 931 aa16.04■□□□□ 0.16
SPIDR-221ENST00000523814 DDAH2O95865 285 aa16.04■□□□□ 0.16
SPIDR-221ENST00000523814 MLNP12872 115 aa16.04■□□□□ 0.16
SPIDR-221ENST00000523814 PKMP14618 531 aaKnown RBP16.04■□□□□ 0.16
SPIDR-221ENST00000523814 PAMP19021 973 aa16.04■□□□□ 0.16
SPIDR-221ENST00000523814 ITGA3P26006 1051 aa16.04■□□□□ 0.16
SPIDR-221ENST00000523814 CMPK1P30085 196 aa16.04■□□□□ 0.16
SPIDR-221ENST00000523814 C4orf17Q53FE4 359 aa16.04■□□□□ 0.16
SPIDR-221ENST00000523814 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.04■□□□□ 0.16
SPIDR-221ENST00000523814 SHISA6Q6ZSJ9 500 aa16.04■□□□□ 0.16
SPIDR-221ENST00000523814 NEK10Q6ZWH5 1172 aa16.04■□□□□ 0.16
SPIDR-221ENST00000523814 DTWD1Q8N5C7 304 aa16.04■□□□□ 0.16
SPIDR-221ENST00000523814 MCUQ8NE86 351 aa16.04■□□□□ 0.16
SPIDR-221ENST00000523814 OR11G2Q8NGC1 345 aa16.04■□□□□ 0.16
SPIDR-221ENST00000523814 SMPDL3AQ92484 453 aa16.04■□□□□ 0.16
SPIDR-221ENST00000523814 FAM136AQ96C01 138 aa16.04■□□□□ 0.16
SPIDR-221ENST00000523814 VPS50Q96JG6 964 aa16.04■□□□□ 0.16
SPIDR-221ENST00000523814 ZFYVE21Q9BQ24 234 aa16.04■□□□□ 0.16
SPIDR-221ENST00000523814 SOX17Q9H6I2 414 aaPredicted RBP16.04■□□□□ 0.16
SPIDR-221ENST00000523814 FAM114A2Q9NRY5 505 aa16.04■□□□□ 0.16
SPIDR-221ENST00000523814 PLEKHB1Q9UF11 243 aaPredicted RBP16.04■□□□□ 0.16
SPIDR-221ENST00000523814 PCDHGA10Q9Y5H3 936 aa16.04■□□□□ 0.16
SPIDR-221ENST00000523814 MAU2Q9Y6X3 613 aa16.04■□□□□ 0.16
SPIDR-221ENST00000523814 WIPF3A6NGB9 483 aa16.03■□□□□ 0.16
SPIDR-221ENST00000523814 SDR42E2A6NKP2 422 aa16.03■□□□□ 0.16
SPIDR-221ENST00000523814 PHF2O75151 1096 aa16.03■□□□□ 0.16
SPIDR-221ENST00000523814 KRT14P02533 472 aa16.03■□□□□ 0.16
SPIDR-221ENST00000523814 HSD17B2P37059 387 aa16.03■□□□□ 0.16
SPIDR-221ENST00000523814 CLCN7P51798 805 aa16.03■□□□□ 0.16
SPIDR-221ENST00000523814 RELAQ04206 551 aa16.03■□□□□ 0.16
SPIDR-221ENST00000523814 OCA2Q04671 838 aa16.03■□□□□ 0.16
SPIDR-221ENST00000523814 NR6A1Q15406 480 aa16.03■□□□□ 0.16
SPIDR-221ENST00000523814 MUM1Q2TAK8 710 aa16.03■□□□□ 0.16
SPIDR-221ENST00000523814 PRTGQ2VWP7 1150 aa16.03■□□□□ 0.16
SPIDR-221ENST00000523814 KLHL38Q2WGJ6 581 aa16.03■□□□□ 0.16
SPIDR-221ENST00000523814 TUBB8Q3ZCM7 444 aa16.03■□□□□ 0.16
SPIDR-221ENST00000523814 AGAP7PQ5VUJ5 663 aa16.03■□□□□ 0.16
SPIDR-221ENST00000523814 ANKRD22Q5VYY1 191 aa16.03■□□□□ 0.16
SPIDR-221ENST00000523814 TTC27Q6P3X3 843 aa16.03■□□□□ 0.16
SPIDR-221ENST00000523814 CASC4Q6P4E1 433 aa16.03■□□□□ 0.16
SPIDR-221ENST00000523814 CUZD1Q86UP6 607 aa16.03■□□□□ 0.16
SPIDR-221ENST00000523814 METTL27Q8N6F8 245 aaPredicted RBP16.03■□□□□ 0.16
SPIDR-221ENST00000523814 PRR7Q8TB68 274 aa16.03■□□□□ 0.16
SPIDR-221ENST00000523814 STT3BQ8TCJ2 826 aa16.03■□□□□ 0.16
SPIDR-221ENST00000523814 AGAP4Q96P64 663 aa16.03■□□□□ 0.16
SPIDR-221ENST00000523814 PLCD4Q9BRC7 762 aa16.03■□□□□ 0.16
SPIDR-221ENST00000523814 TRIM56Q9BRZ2 755 aaKnown RBP16.03■□□□□ 0.16
SPIDR-221ENST00000523814 ACAT2Q9BWD1 397 aa16.03■□□□□ 0.16
SPIDR-221ENST00000523814 LHPPQ9H008 270 aa16.03■□□□□ 0.16
SPIDR-221ENST00000523814 ZNF282Q9UDV7 671 aaPredicted RBP16.03■□□□□ 0.16
SPIDR-221ENST00000523814 TSR3Q9UJK0 312 aaKnown RBP16.03■□□□□ 0.16
SPIDR-221ENST00000523814 COPG1Q9Y678 874 aaKnown RBP16.03■□□□□ 0.16
SPIDR-221ENST00000523814 IGLV3-12A0A075B6K2 115 aa16.02■□□□□ 0.16
SPIDR-221ENST00000523814 IGKV1-8A0A0C4DH67 115 aa16.02■□□□□ 0.16
SPIDR-221ENST00000523814 E5RI56 91 aa16.02■□□□□ 0.16
SPIDR-221ENST00000523814 H0YGG7 62 aa16.02■□□□□ 0.16
SPIDR-221ENST00000523814 ALOX12BO75342 701 aa16.02■□□□□ 0.16
SPIDR-221ENST00000523814 CATP04040 527 aaKnown RBP16.02■□□□□ 0.16
SPIDR-221ENST00000523814 EIF2S1P05198 315 aaKnown RBP16.02■□□□□ 0.16
SPIDR-221ENST00000523814 ZGLP1P0C6A0 271 aa16.02■□□□□ 0.16
SPIDR-221ENST00000523814 RPA3P35244 121 aaPredicted RBP16.02■□□□□ 0.16
SPIDR-221ENST00000523814 CARSP49589 748 aaKnown RBP16.02■□□□□ 0.16
SPIDR-221ENST00000523814 VPS41P49754 854 aa16.02■□□□□ 0.16
SPIDR-221ENST00000523814 TERF1P54274 439 aa16.02■□□□□ 0.16
SPIDR-221ENST00000523814 ARF3P61204 181 aaPredicted RBP16.02■□□□□ 0.16
SPIDR-221ENST00000523814 PRDX1Q06830 199 aaKnown RBP16.02■□□□□ 0.16
SPIDR-221ENST00000523814 KLC1Q07866 573 aa16.02■□□□□ 0.16
SPIDR-221ENST00000523814 RBBP7Q16576 425 aa16.02■□□□□ 0.16
SPIDR-221ENST00000523814 ATG9BQ674R7 924 aa16.02■□□□□ 0.16
SPIDR-221ENST00000523814 SUSD1Q6UWL2 747 aa16.02■□□□□ 0.16
SPIDR-221ENST00000523814 PAQR7Q86WK9 346 aa16.02■□□□□ 0.16
SPIDR-221ENST00000523814 REXO1L1PQ8IX06 675 aa16.02■□□□□ 0.16
SPIDR-221ENST00000523814 PARP9Q8IXQ6 854 aa16.02■□□□□ 0.16
SPIDR-221ENST00000523814 RASGEF1CQ8N431 466 aa16.02■□□□□ 0.16
SPIDR-221ENST00000523814 FBXO15Q8NCQ5 510 aaPredicted RBP16.02■□□□□ 0.16
SPIDR-221ENST00000523814 PPP4R1Q8TF05 950 aa16.02■□□□□ 0.16
SPIDR-221ENST00000523814 MIEF2Q96C03 454 aa16.02■□□□□ 0.16
SPIDR-221ENST00000523814 C10orf90Q96M02 699 aa16.02■□□□□ 0.16
SPIDR-221ENST00000523814 PKP4Q99569 1192 aa16.02■□□□□ 0.16
SPIDR-221ENST00000523814 WDR77Q9BQA1 342 aaPredicted RBP16.02■□□□□ 0.16
SPIDR-221ENST00000523814 XAB2Q9HCS7 855 aaKnown RBP16.02■□□□□ 0.16
SPIDR-221ENST00000523814 MRPS30Q9NP92 439 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms