RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 DUX3Q96PT4 197 aa5.42□□□□□ -1.54
CPNE3-206ENST00000523469 MYADMQ96S97 322 aa5.42□□□□□ -1.54
CPNE3-206ENST00000523469 LMF2Q9BU23 707 aaKnown RBP5.42□□□□□ -1.54
CPNE3-206ENST00000523469 PELI2Q9HAT8 420 aa5.42□□□□□ -1.54
CPNE3-206ENST00000523469 EQTNQ9NQ60 294 aa5.42□□□□□ -1.54
CPNE3-206ENST00000523469 OSER1Q9NX31 292 aa5.42□□□□□ -1.54
CPNE3-206ENST00000523469 FAM169AQ9Y6X4 670 aa5.42□□□□□ -1.54
CPNE3-206ENST00000523469 FLT1P17948 1338 aa5.42□□□□□ -1.54
CPNE3-206ENST00000523469 VCANP13611 3396 aa5.42□□□□□ -1.54
CPNE3-206ENST00000523469 SPTBN5Q9NRC6 3674 aaKnown RBP5.41□□□□□ -1.54
CPNE3-206ENST00000523469 LAMA3Q16787 3333 aa5.41□□□□□ -1.54
CPNE3-206ENST00000523469 SYNDIG1LA6NDD5 238 aa5.41□□□□□ -1.54
CPNE3-206ENST00000523469 CLIC2O15247 247 aa5.41□□□□□ -1.54
CPNE3-206ENST00000523469 PLGP00747 810 aaPredicted RBP5.41□□□□□ -1.54
CPNE3-206ENST00000523469 ABCB1P08183 1280 aaPredicted RBP5.41□□□□□ -1.54
CPNE3-206ENST00000523469 AKR1B1P15121 316 aa5.41□□□□□ -1.54
CPNE3-206ENST00000523469 TCEA1P23193 301 aaKnown RBP5.41□□□□□ -1.54
CPNE3-206ENST00000523469 RAD52P43351 418 aa5.41□□□□□ -1.54
CPNE3-206ENST00000523469 GLIPR1P48060 266 aa5.41□□□□□ -1.54
CPNE3-206ENST00000523469 CDH13P55290 713 aa5.41□□□□□ -1.54
CPNE3-206ENST00000523469 FKBP1BP68106 108 aa5.41□□□□□ -1.54
CPNE3-206ENST00000523469 TUBB4BP68371 445 aa5.41□□□□□ -1.54
CPNE3-206ENST00000523469 UBXN2AP68543 259 aa5.41□□□□□ -1.54
CPNE3-206ENST00000523469 FOXP4Q8IVH2 680 aaPredicted RBP5.41□□□□□ -1.54
CPNE3-206ENST00000523469 POMGNT2Q8NAT1 580 aa5.41□□□□□ -1.54
CPNE3-206ENST00000523469 TSPAN14Q8NG11 270 aa5.41□□□□□ -1.54
CPNE3-206ENST00000523469 OLFM1Q99784 485 aa5.41□□□□□ -1.54
CPNE3-206ENST00000523469 RTP3Q9BQQ7 232 aa5.41□□□□□ -1.54
CPNE3-206ENST00000523469 RHNO1Q9BSD3 238 aa5.41□□□□□ -1.54
CPNE3-206ENST00000523469 VN1R1Q9GZP7 353 aa5.41□□□□□ -1.54
CPNE3-206ENST00000523469 OSGIN1Q9UJX0 560 aa5.41□□□□□ -1.54
CPNE3-206ENST00000523469 LAMB1P07942 1786 aa5.41□□□□□ -1.54
CPNE3-206ENST00000523469 ZSWIM8A7E2V4 1837 aa5.41□□□□□ -1.54
CPNE3-206ENST00000523469 HYKKA2RU49 373 aa5.4□□□□□ -1.54
CPNE3-206ENST00000523469 E9PI62 339 aa5.4□□□□□ -1.54
CPNE3-206ENST00000523469 AMBPP02760 352 aa5.4□□□□□ -1.54
CPNE3-206ENST00000523469 OR2T7P0C7T2 308 aa5.4□□□□□ -1.54
CPNE3-206ENST00000523469 SLC6A6P31641 620 aa5.4□□□□□ -1.54
CPNE3-206ENST00000523469 SLC9A3P48764 834 aa5.4□□□□□ -1.54
CPNE3-206ENST00000523469 SLC39A6Q13433 755 aa5.4□□□□□ -1.54
CPNE3-206ENST00000523469 TOMM20Q15388 145 aa5.4□□□□□ -1.54
CPNE3-206ENST00000523469 CORO6Q6QEF8 472 aa5.4□□□□□ -1.54
CPNE3-206ENST00000523469 TMPRSS11FQ6ZWK6 438 aa5.4□□□□□ -1.54
CPNE3-206ENST00000523469 MOB2Q70IA6 237 aa5.4□□□□□ -1.54
CPNE3-206ENST00000523469 ZNF554Q86TJ5 538 aa5.4□□□□□ -1.54
CPNE3-206ENST00000523469 COMMD2Q86X83 199 aa5.4□□□□□ -1.54
CPNE3-206ENST00000523469 FAM114A1Q8IWE2 563 aa5.4□□□□□ -1.54
CPNE3-206ENST00000523469 KLHDC8BQ8IXV7 354 aa5.4□□□□□ -1.54
CPNE3-206ENST00000523469 OR5M8Q8NGP6 311 aa5.4□□□□□ -1.54
CPNE3-206ENST00000523469 ZNF501Q96CX3 271 aaPredicted RBP5.4□□□□□ -1.54
CPNE3-206ENST00000523469 F2RL3Q96RI0 385 aa5.4□□□□□ -1.54
CPNE3-206ENST00000523469 TRAF4Q9BUZ4 470 aaPredicted RBP5.4□□□□□ -1.54
CPNE3-206ENST00000523469 CCDC106Q9BWC9 280 aa5.4□□□□□ -1.54
CPNE3-206ENST00000523469 DDX25Q9UHL0 483 aaKnown RBP5.4□□□□□ -1.54
CPNE3-206ENST00000523469 GAB2Q9UQC2 676 aa5.4□□□□□ -1.54
CPNE3-206ENST00000523469 RABGAP1Q9Y3P9 1069 aa5.4□□□□□ -1.54
CPNE3-206ENST00000523469 PIEZO1Q92508 2521 aa5.4□□□□□ -1.55
CPNE3-206ENST00000523469 SMCHD1A6NHR9 2005 aa5.4□□□□□ -1.55
CPNE3-206ENST00000523469 TCRBV21S2A2A0A5A6 115 aa5.39□□□□□ -1.55
CPNE3-206ENST00000523469 OR10H2O60403 315 aa5.39□□□□□ -1.55
CPNE3-206ENST00000523469 ERVK-10P10266 1014 aa5.39□□□□□ -1.55
CPNE3-206ENST00000523469 HOXC8P31273 242 aa5.39□□□□□ -1.55
CPNE3-206ENST00000523469 TNNT2P45379 298 aaPredicted RBP5.39□□□□□ -1.55
CPNE3-206ENST00000523469 CDH11P55287 796 aa5.39□□□□□ -1.55
CPNE3-206ENST00000523469 CX3CL1P78423 397 aa5.39□□□□□ -1.55
CPNE3-206ENST00000523469 CALD1Q05682 793 aaKnown RBP5.39□□□□□ -1.55
CPNE3-206ENST00000523469 RNASEH2BQ5TBB1 312 aaKnown RBP5.39□□□□□ -1.55
CPNE3-206ENST00000523469 MFSD4BQ5TF39 518 aa5.39□□□□□ -1.55
CPNE3-206ENST00000523469 NAA16Q6N069 864 aaPredicted RBP5.39□□□□□ -1.55
CPNE3-206ENST00000523469 CEP57L1Q8IYX8 460 aa5.39□□□□□ -1.55
CPNE3-206ENST00000523469 TTC5Q8N0Z6 440 aa5.39□□□□□ -1.55
CPNE3-206ENST00000523469 POGLUT1Q8NBL1 392 aa5.39□□□□□ -1.55
CPNE3-206ENST00000523469 CFAP61Q8NHU2 1237 aa5.39□□□□□ -1.55
CPNE3-206ENST00000523469 SPATA3Q8NHX4 192 aa5.39□□□□□ -1.55
CPNE3-206ENST00000523469 SLF1Q9BQI6 1058 aa5.39□□□□□ -1.55
CPNE3-206ENST00000523469 WNT5BQ9H1J7 359 aa5.39□□□□□ -1.55
CPNE3-206ENST00000523469 ARRDC1-AS1Q9H2J1 176 aa5.39□□□□□ -1.55
CPNE3-206ENST00000523469 TBC1D17Q9HA65 648 aa5.39□□□□□ -1.55
CPNE3-206ENST00000523469 ANKEF1Q9NU02 776 aa5.39□□□□□ -1.55
CPNE3-206ENST00000523469 DPP3Q9NY33 737 aa5.39□□□□□ -1.55
CPNE3-206ENST00000523469 IL17BQ9UHF5 180 aa5.39□□□□□ -1.55
CPNE3-206ENST00000523469 ANAPC2Q9UJX6 822 aa5.39□□□□□ -1.55
CPNE3-206ENST00000523469 TTLL3Q9Y4R7 772 aa5.39□□□□□ -1.55
CPNE3-206ENST00000523469 RIC1Q4ADV7 1423 aa5.39□□□□□ -1.55
CPNE3-206ENST00000523469 NCOR1O75376 2440 aa5.38□□□□□ -1.55
CPNE3-206ENST00000523469 GAPDHSO14556 408 aaPredicted RBP5.38□□□□□ -1.55
CPNE3-206ENST00000523469 SLC22A2O15244 555 aa5.38□□□□□ -1.55
CPNE3-206ENST00000523469 SOCS5O75159 536 aa5.38□□□□□ -1.55
CPNE3-206ENST00000523469 ADRB2P07550 413 aa5.38□□□□□ -1.55
CPNE3-206ENST00000523469 PFKFB1P16118 471 aa5.38□□□□□ -1.55
CPNE3-206ENST00000523469 IL11P20809 199 aa5.38□□□□□ -1.55
CPNE3-206ENST00000523469 DNASE1P24855 282 aa5.38□□□□□ -1.55
CPNE3-206ENST00000523469 NF2P35240 595 aa5.38□□□□□ -1.55
CPNE3-206ENST00000523469 TPD52P55327 224 aaPredicted RBP5.38□□□□□ -1.55
CPNE3-206ENST00000523469 SP3Q02447 781 aa5.38□□□□□ -1.55
CPNE3-206ENST00000523469 LGALS3BPQ08380 585 aa5.38□□□□□ -1.55
CPNE3-206ENST00000523469 RBM39Q14498 530 aaKnown RBP5.38□□□□□ -1.55
CPNE3-206ENST00000523469 LRIT3Q3SXY7 679 aa5.38□□□□□ -1.55
CPNE3-206ENST00000523469 ZNF449Q6P9G9 518 aa5.38□□□□□ -1.55
CPNE3-206ENST00000523469 ISCA2Q86U28 154 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms