RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 FNDC11Q9BVV2 318 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 GATA5Q9BWX5 397 aaPredicted RBP3.85□□□□□ -1.79
SKP1-209ENST00000522552 IDI2Q9BXS1 227 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 SLC39A8Q9C0K1 460 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 WWTR1Q9GZV5 400 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 SNX25Q9H3E2 840 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 DPAGT1Q9H3H5 408 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 KCNK12Q9HB15 430 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 CDH20Q9HBT6 801 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 MRPL17Q9NRX2 175 aaKnown RBP3.85□□□□□ -1.79
SKP1-209ENST00000522552 ACSS1Q9NUB1 689 aaPredicted RBP3.85□□□□□ -1.79
SKP1-209ENST00000522552 RHCGQ9UBD6 479 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 STK39Q9UEW8 545 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 B3GALT5Q9Y2C3 310 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 ADGRA2Q96PE1 1338 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.84□□□□□ -1.79
SKP1-209ENST00000522552 A0A1W2PPK0 400 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 TMEM200CA6NKL6 621 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 EIF4E1BA6NMX2 242 aaKnown RBP3.84□□□□□ -1.79
SKP1-209ENST00000522552 ANKRD30BLA7E2S9 258 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 A8MUI8 341 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 VWC2LB2RUY7 222 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 SPECC1L-ADORA2AF8WAN1 911 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 PSMD3O43242 534 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 ECE2O60344 883 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 OR10H2O60403 315 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 CDC14BO60729 498 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 OR4F21O95013 312 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 POP4O95707 220 aaKnown RBP3.84□□□□□ -1.79
SKP1-209ENST00000522552 PROS1P07225 676 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 NUDT17P0C025 328 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 C1QTNF9P0C862 333 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 RRASP10301 218 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 CEBPBP17676 345 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 S1PR1P21453 382 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 PRKACBP22694 351 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 CDC25AP30304 524 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 CHRNA5P30532 468 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 HIBADHP31937 336 aaKnown RBP3.84□□□□□ -1.79
SKP1-209ENST00000522552 DLSTP36957 453 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 HSD17B3P37058 310 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 RGS4P49798 205 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 NUDT6P53370 316 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 CYP4F2P78329 520 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 MVPQ14764 893 aaKnown RBP3.84□□□□□ -1.79
SKP1-209ENST00000522552 PRKD1Q15139 912 aaPredicted RBP3.84□□□□□ -1.79
SKP1-209ENST00000522552 ACKR1Q16570 336 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 DECR1Q16698 335 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 CLPPQ16740 277 aaPredicted RBP3.84□□□□□ -1.79
SKP1-209ENST00000522552 MPPE1Q53F39 396 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 RNASE12Q5GAN4 147 aaKnown RBP3.84□□□□□ -1.79
SKP1-209ENST00000522552 AGAP6Q5VW22 663 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 TAF3Q5VWG9 929 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 C18orf63Q68DL7 685 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 AAGABQ6PD74 315 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 ZNF517Q6ZMY9 492 aaPredicted RBP3.84□□□□□ -1.79
SKP1-209ENST00000522552 SLC16A9Q7RTY1 509 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 PALM2Q8IXS6 379 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 OFCC1Q8IZS5 231 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 FAM9CQ8IZT9 166 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 MCPH1Q8NEM0 835 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 BPIFCQ8NFQ6 507 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 RP9Q8TA86 221 aaKnown RBP3.84□□□□□ -1.79
SKP1-209ENST00000522552 PIGBQ92521 554 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 DPF1Q92782 380 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 OSTF1Q92882 214 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 ISG20Q96AZ6 181 aaKnown RBP3.84□□□□□ -1.79
SKP1-209ENST00000522552 EFHD2Q96C19 240 aaPredicted RBP3.84□□□□□ -1.79
SKP1-209ENST00000522552 CDK19Q9BWU1 502 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 MRPL37Q9BZE1 423 aaKnown RBP3.84□□□□□ -1.79
SKP1-209ENST00000522552 TMEM39BQ9GZU3 492 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 MAGT1Q9H0U3 335 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 DPEP3Q9H4B8 488 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 MED20Q9H944 212 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 CALHM2Q9HA72 323 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 HINT3Q9NQE9 182 aaKnown RBP3.84□□□□□ -1.79
SKP1-209ENST00000522552 OSER1Q9NX31 292 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 SLC9A2Q9UBY0 812 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 CRLS1Q9UJA2 301 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 OAZ3Q9UMX2 235 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 CHST2Q9Y4C5 530 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 RNF114Q9Y508 228 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 DISP3Q9P2K9 1392 aa3.84□□□□□ -1.79
SKP1-209ENST00000522552 KIF16BQ96L93 1317 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 A0A096LPK6 155 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 PIPSLA2A3N6 862 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 ARHGEF35A5YM69 484 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 BECN2A8MW95 431 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 ZNF879B4DU55 563 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 TMEM189-UBE2V1I3L0A0 370 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 J3QR06 171 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 ALOX15BO15296 676 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 GMNNO75496 209 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 RPS6KA4O75676 772 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 GSRP00390 522 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 KRT14P02533 472 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 IVLP07476 585 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 OR8G3PP0DMU2 310 aa3.84□□□□□ -1.8
SKP1-209ENST00000522552 SAGP10523 405 aaPredicted RBP3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms