RNA–Protein interactions for RNA: ENST00000522006.5

LAMA4-219, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-219ENST00000522006 ATP5A1P25705 553 aaKnown RBP11.13□□□□□ -0.63
LAMA4-219ENST00000522006 FLT3LGP49771 235 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 OR12D2P58182 307 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 S100A10P60903 97 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 FOXM1Q08050 763 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 ARFRP1Q13795 201 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 GPR68Q15743 365 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 SPAG16Q8N0X2 631 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 PNLDC1Q8NA58 520 aaKnown RBP11.13□□□□□ -0.63
LAMA4-219ENST00000522006 NCSTNQ92542 709 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 KLRG1Q96E93 195 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 FXYD6Q9H0Q3 95 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 TREM1Q9NP99 234 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 DNAJB4Q9UDY4 337 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 CLIC1O00299 241 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 SMAD9O15198 467 aaKnown RBP11.13□□□□□ -0.63
LAMA4-219ENST00000522006 UNGP13051 313 aaPredicted RBP11.13□□□□□ -0.63
LAMA4-219ENST00000522006 CKMT2P17540 419 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 CTSOP43234 321 aaPredicted RBP11.13□□□□□ -0.63
LAMA4-219ENST00000522006 CDH15P55291 814 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 RPP38P78345 283 aaKnown RBP11.13□□□□□ -0.63
LAMA4-219ENST00000522006 HMGCS1Q01581 520 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 SP2Q02086 613 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 DPYSL2Q16555 572 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 OGFRL1Q5TC84 451 aaPredicted RBP11.13□□□□□ -0.63
LAMA4-219ENST00000522006 LRRC69Q6ZNQ3 347 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 SLC22A17Q8WUG5 538 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 CANT1Q8WVQ1 401 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 CCDC120Q96HB5 630 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 ZNF641Q96N77 438 aaPredicted RBP11.13□□□□□ -0.63
LAMA4-219ENST00000522006 COL21A1Q96P44 957 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 TNFRSF10DQ9UBN6 386 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 VPS29Q9UBQ0 182 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 IL36AQ9UHA7 158 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 ERVK-11Q9UQG0 969 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 PCDHGB1Q9Y5G3 927 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 NEMP2A6NFY4 417 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 YJEFN3A6XGL0 299 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 SLC31A1O15431 190 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 RPP14O95059 124 aaKnown RBP11.13□□□□□ -0.63
LAMA4-219ENST00000522006 ARPC4P59998 168 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 SLC3A1Q07837 685 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 RFTN1Q14699 578 aaPredicted RBP11.13□□□□□ -0.63
LAMA4-219ENST00000522006 PAQR3Q6TCH7 311 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 PRSS55Q6UWB4 352 aaPredicted RBP11.13□□□□□ -0.63
LAMA4-219ENST00000522006 NUDT13Q86X67 352 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 NPAS4Q8IUM7 802 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 YIPF7Q8N8F6 280 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 C17orf50Q8WW18 174 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 ZNF471Q9BX82 626 aaPredicted RBP11.13□□□□□ -0.63
LAMA4-219ENST00000522006 ADAP2Q9NPF8 381 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 C14orf105Q9NVL8 296 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 ABI3Q9P2A4 366 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 ADGRB1O14514 1584 aa11.13□□□□□ -0.63
LAMA4-219ENST00000522006 ZNF878C9JN71 531 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 NIPSNAP2O75323 286 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 HMGN1P05114 100 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 SNHG28P0DPA3 235 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 PTPN2P17706 415 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 XRCC1P18887 633 aaPredicted RBP11.12□□□□□ -0.63
LAMA4-219ENST00000522006 GAD2Q05329 585 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 PCBP2Q15366 365 aaKnown RBP eCLIP11.12□□□□□ -0.63
LAMA4-219ENST00000522006 RBM20Q5T481 1227 aaKnown RBP11.12□□□□□ -0.63
LAMA4-219ENST00000522006 OR4F3Q6IEY1 312 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 RAB12Q6IQ22 244 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 SLC2A7Q6PXP3 512 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 ZNF517Q6ZMY9 492 aaPredicted RBP11.12□□□□□ -0.63
LAMA4-219ENST00000522006 AMZ2Q86W34 360 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 PACRGLQ8N7B6 248 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 NIPA2Q8N8Q9 360 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 NFKBIDQ8NI38 313 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 RIT1Q92963 219 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 FCRL5Q96RD9 977 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 SIX2Q9NPC8 291 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 MKLN1Q9UL63 735 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 NDRG2Q9UN36 371 aaKnown RBP11.12□□□□□ -0.63
LAMA4-219ENST00000522006 CMAHPQ9Y471 501 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.12□□□□□ -0.63
LAMA4-219ENST00000522006 A0A0G2JPF8 293 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 HNRNPCL3B7ZW38 293 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 VNN1O95497 513 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 YES1P07947 543 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 HNRNPCL4P0DMR1 293 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 CXCR1P25024 350 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 SLC6A9P48067 706 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 DUOXA1Q1HG43 343 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 SPIN4Q56A73 249 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 CARD16Q5EG05 197 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 HDDC3Q8N4P3 179 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 ZNF527Q8NB42 609 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 TTLQ8NG68 377 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 CYTH4Q9UIA0 394 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 TLR6Q9Y2C9 796 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 DUXAA6NLW8 204 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 A8MT66 165 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 M0R036 132 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 NCBP2-AS2Q69YL0 99 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 PAQR7Q86WK9 346 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 CEP97Q8IW35 865 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 FOXRED2Q8IWF2 684 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms