RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 RFLNBQ8N5W9 214 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 AADATQ8N5Z0 425 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 ESX1Q8N693 406 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 C12orf29Q8N999 325 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 ANKRD52Q8NB46 1076 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 NAXEQ8NCW5 288 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 ZNF397Q8NF99 534 aaPredicted RBP3.2□□□□□ -1.9
VPS13B-209ENST00000521559 OR8K1Q8NGG5 319 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 LILRB1Q8NHL6 650 aaPredicted RBP3.2□□□□□ -1.9
VPS13B-209ENST00000521559 UBA3Q8TBC4 463 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 SLC2A14Q8TDB8 520 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 ZNF606Q8WXB4 792 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 SYN2Q92777 582 aaPredicted RBP3.2□□□□□ -1.9
VPS13B-209ENST00000521559 MYLPFQ96A32 169 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 ZNF707Q96C28 371 aaPredicted RBP3.2□□□□□ -1.9
VPS13B-209ENST00000521559 SMARCD1Q96GM5 515 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 MPP4Q96JB8 637 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 SPATA17Q96L03 361 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 CEP295NLQ96MC4 621 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 PPM1MQ96MI6 270 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 SLITRK1Q96PX8 696 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 SPAG5Q96R06 1193 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 KCNK16Q96T55 309 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 MED10Q9BTT4 135 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 DUSP16Q9BY84 665 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 GPR88Q9GZN0 384 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 S1PR5Q9H228 398 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 LHX5Q9H2C1 402 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 CLK4Q9HAZ1 481 aaKnown RBP3.2□□□□□ -1.9
VPS13B-209ENST00000521559 CSNK1G1Q9HCP0 422 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 COMMD8Q9NX08 183 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 IL37Q9NZH6 218 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 AIPL1Q9NZN9 384 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 OR6C3Q9NZP0 311 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 YIPF1Q9Y548 306 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 ASB3Q9Y575 518 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 TCHHQ07283 1943 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 LOXHD1Q8IVV2 1947 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 SCN5AQ14524 2016 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 NOTCH4Q99466 2003 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 SIP14410 1827 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 SAA2-SAA4A0A096LPE2 208 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 ARHGAP10A1A4S6 786 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 TYW5A2RUC4 315 aaKnown RBP3.19□□□□□ -1.9
VPS13B-209ENST00000521559 MAGEA13PA6NCF6 341 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 LRRC53A6NM62 1247 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 HHLA1C9JL84 531 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 F8VP50 259 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 EBAG9O00559 213 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 ZNF197O14709 1029 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 XPO1O14980 1071 aaKnown RBP3.19□□□□□ -1.9
VPS13B-209ENST00000521559 CCL16O15467 120 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 BUB3O43684 328 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 SLC25A17O43808 307 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 TBX10O75333 385 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 RFPL2O75678 378 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 BEST1O76090 585 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 ADCY5O95622 1261 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 FGF19O95750 216 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 CALCAP01258 141 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 GYPCP04921 128 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 F7P08709 466 aaPredicted RBP3.19□□□□□ -1.9
VPS13B-209ENST00000521559 TPM1P09493 284 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 PNMA6AP0CW24 399 aaPredicted RBP3.19□□□□□ -1.9
VPS13B-209ENST00000521559 CSH1P0DML2 217 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 CSH2P0DML3 217 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 PCNAP12004 261 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 CYP11B1P15538 503 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 HMGA1P17096 107 aaKnown RBP3.19□□□□□ -1.9
VPS13B-209ENST00000521559 PTPN2P17706 415 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 ATF6P18850 670 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 TNFAIP3P21580 790 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 KCNA5P22460 613 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 ANXA13P27216 316 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 HNRNPH3P31942 346 aaKnown RBP3.19□□□□□ -1.9
VPS13B-209ENST00000521559 CASP14P31944 242 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 CDH5P33151 784 aaPredicted RBP3.19□□□□□ -1.9
VPS13B-209ENST00000521559 KRT9P35527 623 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 PRKCIP41743 596 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 MTHFRP42898 656 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 PTPN9P43378 593 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 RPL34P49207 117 aaKnown RBP3.19□□□□□ -1.9
VPS13B-209ENST00000521559 TUBP50607 506 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 BLKP51451 505 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 HDAC4P56524 1084 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 MAP3K7CLP57077 242 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 SLC8A3P57103 927 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 YWHAZP63104 245 aaKnown RBP3.19□□□□□ -1.9
VPS13B-209ENST00000521559 CDR2Q01850 454 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.19□□□□□ -1.9
VPS13B-209ENST00000521559 BST2Q10589 180 aaKnown RBP3.19□□□□□ -1.9
VPS13B-209ENST00000521559 FOXD4Q12950 439 aaPredicted RBP3.19□□□□□ -1.9
VPS13B-209ENST00000521559 MYBPHQ13203 477 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 NAA25Q14CX7 972 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 VEPH1Q14D04 833 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 GOLGA7BQ2TAP0 167 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 RARS2Q5T160 578 aaKnown RBP3.19□□□□□ -1.9
VPS13B-209ENST00000521559 SDHAF4Q5VUM1 108 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 CES5AQ6NT32 575 aa3.19□□□□□ -1.9
VPS13B-209ENST00000521559 RETSATQ6NUM9 610 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms