RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 CLSTN3Q9BQT9 956 aa4.77□□□□□ -1.65
CTNNA1-212ENST00000518919 ADGRE3Q9BY15 652 aa4.77□□□□□ -1.65
CTNNA1-212ENST00000518919 FRMD8Q9BZ67 464 aaPredicted RBP4.77□□□□□ -1.65
CTNNA1-212ENST00000518919 SFXN1Q9H9B4 322 aa4.77□□□□□ -1.65
CTNNA1-212ENST00000518919 UGT1A7Q9HAW7 530 aa4.77□□□□□ -1.65
CTNNA1-212ENST00000518919 UGT1A10Q9HAW8 530 aa4.77□□□□□ -1.65
CTNNA1-212ENST00000518919 UGT1A8Q9HAW9 530 aa4.77□□□□□ -1.65
CTNNA1-212ENST00000518919 NMUR1Q9HB89 426 aa4.77□□□□□ -1.65
CTNNA1-212ENST00000518919 RGS18Q9NS28 235 aa4.77□□□□□ -1.65
CTNNA1-212ENST00000518919 ABCF3Q9NUQ8 709 aa4.77□□□□□ -1.65
CTNNA1-212ENST00000518919 TBC1D13Q9NVG8 400 aa4.77□□□□□ -1.65
CTNNA1-212ENST00000518919 HCFC1R1Q9NWW0 138 aa4.77□□□□□ -1.65
CTNNA1-212ENST00000518919 DDIT4Q9NX09 232 aa4.77□□□□□ -1.65
CTNNA1-212ENST00000518919 MARCH5Q9NX47 278 aa4.77□□□□□ -1.65
CTNNA1-212ENST00000518919 ARHGEF38Q9NXL2 777 aa4.77□□□□□ -1.65
CTNNA1-212ENST00000518919 DLL3Q9NYJ7 618 aa4.77□□□□□ -1.65
CTNNA1-212ENST00000518919 NKIRAS1Q9NYS0 192 aa4.77□□□□□ -1.65
CTNNA1-212ENST00000518919 SENP1Q9P0U3 644 aa4.77□□□□□ -1.65
CTNNA1-212ENST00000518919 SLC17A7Q9P2U7 560 aa4.77□□□□□ -1.65
CTNNA1-212ENST00000518919 SLC17A6Q9P2U8 582 aa4.77□□□□□ -1.65
CTNNA1-212ENST00000518919 RPS6KA6Q9UK32 745 aa4.77□□□□□ -1.65
CTNNA1-212ENST00000518919 FZD4Q9ULV1 537 aa4.77□□□□□ -1.65
CTNNA1-212ENST00000518919 CORO1CQ9ULV4 474 aaPredicted RBP4.77□□□□□ -1.65
CTNNA1-212ENST00000518919 PCDHGB4Q9UN71 923 aa4.77□□□□□ -1.65
CTNNA1-212ENST00000518919 B3GNT3Q9Y2A9 372 aa4.77□□□□□ -1.65
CTNNA1-212ENST00000518919 PRG3Q9Y2Y8 225 aaPredicted RBP4.77□□□□□ -1.65
CTNNA1-212ENST00000518919 KCNE2Q9Y6J6 123 aa4.77□□□□□ -1.65
CTNNA1-212ENST00000518919 ADAMTS20P59510 1910 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 LOC100996750A0A140TA64 210 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 C16orf96A6NNT2 1141 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 AGAP14A8MT82 685 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 KCNK1O00180 336 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 CAPN9O14815 690 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 LDLRAD4O15165 306 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 MSI1O43347 362 aaKnown RBP4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 KIAA0754O94854 1291 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 VNN2O95498 520 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 APOEP02649 317 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 CHRM4P08173 479 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 GSTA2P09210 222 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 EGR2P11161 476 aaPredicted RBP4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 CD72P21854 359 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 RPA3P35244 121 aaPredicted RBP4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 HADHAP40939 763 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 MSH2P43246 934 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 MTNR1AP48039 350 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 HCAR3P49019 387 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 PLXNA3P51805 1871 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 EEFSECP57772 596 aaKnown RBP4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 CRADDP78560 199 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 CFHR3Q02985 330 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 SLC18A2Q05940 514 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 PPIDQ08752 370 aaKnown RBP4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 AP1B1Q10567 949 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 MED22Q15528 200 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 SLC39A12Q504Y0 691 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 LACTB2Q53H82 288 aaPredicted RBP4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 ABHD17BQ5VST6 288 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 GKAP1Q5VSY0 366 aaPredicted RBP4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 SDHAF4Q5VUM1 108 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 BSPRYQ5W0U4 402 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 LAIR1Q6GTX8 287 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 SLC30A6Q6NXT4 461 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 MTFR2Q6P444 385 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 ANKRD16Q6P6B7 361 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 TMEM81Q6P7N7 255 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 LRRC8BQ6P9F7 803 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 SLC24A5Q71RS6 500 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 MARK2Q7KZI7 788 aaKnown RBP4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 SPATA21Q7Z572 469 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 SPATA2LQ8IUW3 424 aaPredicted RBP4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 C1orf210Q8IVY1 113 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 ARHGAP12Q8IWW6 846 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 PALM2Q8IXS6 379 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 KLHDC8BQ8IXV7 354 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 COLGALT1Q8NBJ5 622 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 GSDMBQ8TAX9 411 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 URGCPQ8TCY9 931 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 RAET1EQ8TD07 263 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 DYDC1Q8WWB3 177 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 ARNTL2Q8WYA1 636 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 CASP10Q92851 521 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 HDAC11Q96DB2 347 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 LRRC39Q96DD0 335 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 PERPQ96FX8 193 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 RMDN2Q96LZ7 410 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 GLT1D1Q96MS3 346 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 PGLYRP2Q96PD5 576 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 SMC6Q96SB8 1091 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 CYTH2Q99418 400 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 EBNA1BP2Q99848 306 aaKnown RBP4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 ABHD14AQ9BUJ0 271 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 BDH2Q9BUT1 245 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 MLPHQ9BV36 600 aaPredicted RBP4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 KRTAP4-6Q9BYQ5 205 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 TRIM2Q9C040 744 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 NSRP1Q9H0G5 558 aaKnown RBP4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 TKTL2Q9H0I9 626 aa4.76□□□□□ -1.65
CTNNA1-212ENST00000518919 GBA3Q9H227 469 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms