RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 FARSAQ9Y285 508 aaKnown RBP12.76□□□□□ -0.37
VEGFA-219ENST00000518824 MTO1Q9Y2Z2 717 aaKnown RBP12.76□□□□□ -0.37
VEGFA-219ENST00000518824 KLK4Q9Y5K2 254 aa12.76□□□□□ -0.37
VEGFA-219ENST00000518824 TCRBV9S1A1TA0A576 114 aa12.75□□□□□ -0.37
VEGFA-219ENST00000518824 C21orf140B9A014 251 aa12.75□□□□□ -0.37
VEGFA-219ENST00000518824 EIF3HO15372 352 aaKnown RBP eCLIP12.75□□□□□ -0.375e-6■□□□□ 8.9
VEGFA-219ENST00000518824 ZBTB14O43829 449 aa12.75□□□□□ -0.37
VEGFA-219ENST00000518824 STATHP02808 62 aa12.75□□□□□ -0.37
VEGFA-219ENST00000518824 KLK3P07288 261 aaPredicted RBP12.75□□□□□ -0.37
VEGFA-219ENST00000518824 RPA3P35244 121 aaPredicted RBP12.75□□□□□ -0.37
VEGFA-219ENST00000518824 VSX2P58304 361 aaPredicted RBP12.75□□□□□ -0.37
VEGFA-219ENST00000518824 CKAP4Q07065 602 aaKnown RBP12.75□□□□□ -0.37
VEGFA-219ENST00000518824 PDAP1Q13442 181 aaKnown RBP12.75□□□□□ -0.37
VEGFA-219ENST00000518824 ARHGAP19Q14CB8 494 aa12.75□□□□□ -0.37
VEGFA-219ENST00000518824 EFTUD2Q15029 972 aaKnown RBP eCLIP12.75□□□□□ -0.374e-10■■■■■ 38.6
VEGFA-219ENST00000518824 WHAMMP3Q1A5X7 153 aa12.75□□□□□ -0.37
VEGFA-219ENST00000518824 ICE2Q659A1 982 aa12.75□□□□□ -0.37
VEGFA-219ENST00000518824 ZNF425Q6IV72 752 aa12.75□□□□□ -0.37
VEGFA-219ENST00000518824 FAM45BPQ6NSW5 357 aa12.75□□□□□ -0.37
VEGFA-219ENST00000518824 RHBDD2Q6NTF9 364 aa12.75□□□□□ -0.37
VEGFA-219ENST00000518824 UGT3A1Q6NUS8 523 aa12.75□□□□□ -0.37
VEGFA-219ENST00000518824 C8orf74Q6P047 294 aa12.75□□□□□ -0.37
VEGFA-219ENST00000518824 RNF44Q7L0R7 432 aa12.75□□□□□ -0.37
VEGFA-219ENST00000518824 PLD3Q8IV08 490 aa12.75□□□□□ -0.37
VEGFA-219ENST00000518824 PALM2Q8IXS6 379 aa12.75□□□□□ -0.37
VEGFA-219ENST00000518824 RAB42Q8N4Z0 105 aa12.75□□□□□ -0.37
VEGFA-219ENST00000518824 METTL27Q8N6F8 245 aaPredicted RBP12.75□□□□□ -0.37
VEGFA-219ENST00000518824 LSM14AQ8ND56 463 aaKnown RBP12.75□□□□□ -0.37
VEGFA-219ENST00000518824 FAM45AQ8TCE6 357 aa12.75□□□□□ -0.37
VEGFA-219ENST00000518824 ANKRD49Q8WVL7 239 aa12.75□□□□□ -0.37
VEGFA-219ENST00000518824 WBP1Q96G27 269 aa12.75□□□□□ -0.37
VEGFA-219ENST00000518824 VPS39Q96JC1 886 aa12.75□□□□□ -0.37
VEGFA-219ENST00000518824 ZNF285Q96NJ3 590 aa12.75□□□□□ -0.37
VEGFA-219ENST00000518824 SLC7A5P2Q9GIP4 190 aa12.75□□□□□ -0.37
VEGFA-219ENST00000518824 RAB17Q9H0T7 212 aa12.75□□□□□ -0.37
VEGFA-219ENST00000518824 ATG10Q9H0Y0 220 aa12.75□□□□□ -0.37
VEGFA-219ENST00000518824 LRRC4CQ9HCJ2 640 aa12.75□□□□□ -0.37
VEGFA-219ENST00000518824 MRPS30Q9NP92 439 aaKnown RBP12.75□□□□□ -0.37
VEGFA-219ENST00000518824 MED13Q9UHV7 2174 aa12.75□□□□□ -0.37
VEGFA-219ENST00000518824 KCND3Q9UK17 655 aa12.75□□□□□ -0.37
VEGFA-219ENST00000518824 FAM159BA6NKW6 160 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 TARM1B6A8C7 271 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 K7EM74 188 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 TK2O00142 265 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 EIF3FO00303 357 aaPredicted RBP12.74□□□□□ -0.37
VEGFA-219ENST00000518824 CDC7O00311 574 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 DNAJB5O75953 348 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 ZNF37AP17032 561 aaPredicted RBP12.74□□□□□ -0.37
VEGFA-219ENST00000518824 CMPK1P30085 196 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 MAGEA4P43358 317 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 RGS4P49798 205 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 POLE2P56282 527 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 IL2P60568 153 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 TBPL1P62380 186 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 GUCY2DQ02846 1103 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 PRDX1Q06830 199 aaKnown RBP12.74□□□□□ -0.37
VEGFA-219ENST00000518824 CHAF1BQ13112 559 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 WASHC2DQ5SRD0 308 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 CPZQ66K79 652 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 TLDC1Q6P9B6 456 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 BORAQ6PGQ7 559 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 C3orf62Q6ZUJ4 267 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 SLC26A11Q86WA9 606 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 PAQR7Q86WK9 346 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 SHISA5Q8N114 240 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 MYO1HQ8N1T3 1032 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 SPATA6LQ8N4H0 392 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 ADAMTS17Q8TE56 1095 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 SEC14L1Q92503 715 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 ZUFSPQ96AP4 578 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 ALKBH8Q96BT7 664 aaKnown RBP12.74□□□□□ -0.37
VEGFA-219ENST00000518824 MED8Q96G25 268 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 SELENOSQ9BQE4 189 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 PLCD4Q9BRC7 762 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 ARHGAP9Q9BRR9 750 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 TRIM55Q9BYV6 548 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 RHOJQ9H4E5 214 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 PARVBQ9HBI1 364 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 INTS7Q9NVH2 962 aaKnown RBP12.74□□□□□ -0.37
VEGFA-219ENST00000518824 TCFL5Q9UL49 500 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 KCNMB2Q9Y691 235 aa12.74□□□□□ -0.37
VEGFA-219ENST00000518824 TNRC6AQ8NDV7 1962 aaKnown RBP12.73□□□□□ -0.37
VEGFA-219ENST00000518824 NPEPPSL1A6NEC2 478 aa12.73□□□□□ -0.37
VEGFA-219ENST00000518824 EIF4E1BA6NMX2 242 aaKnown RBP12.73□□□□□ -0.37
VEGFA-219ENST00000518824 H0YGG7 62 aa12.73□□□□□ -0.37
VEGFA-219ENST00000518824 MASP2O00187 686 aa12.73□□□□□ -0.37
VEGFA-219ENST00000518824 HAT1O14929 419 aa12.73□□□□□ -0.37
VEGFA-219ENST00000518824 P2RX6O15547 441 aa12.73□□□□□ -0.37
VEGFA-219ENST00000518824 PHGDHO43175 533 aaKnown RBP12.73□□□□□ -0.37
VEGFA-219ENST00000518824 KLF7O75840 302 aaPredicted RBP12.73□□□□□ -0.37
VEGFA-219ENST00000518824 FKBP9O95302 570 aa12.73□□□□□ -0.37
VEGFA-219ENST00000518824 WISP3O95389 354 aaPredicted RBP12.73□□□□□ -0.37
VEGFA-219ENST00000518824 GUCA1CO95843 209 aa12.73□□□□□ -0.37
VEGFA-219ENST00000518824 EIF2S1P05198 315 aaKnown RBP12.73□□□□□ -0.37
VEGFA-219ENST00000518824 C8GP07360 202 aa12.73□□□□□ -0.37
VEGFA-219ENST00000518824 RAB40ALP0C0E4 278 aa12.73□□□□□ -0.37
VEGFA-219ENST00000518824 NR1D1P20393 614 aa12.73□□□□□ -0.37
VEGFA-219ENST00000518824 ALAS2P22557 587 aa12.73□□□□□ -0.37
VEGFA-219ENST00000518824 OR1D4P47884 311 aa12.73□□□□□ -0.37
VEGFA-219ENST00000518824 ARF3P61204 181 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms