RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 DQX1Q8TE96 717 aaKnown RBP3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 MZB1Q8WU39 189 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 GGHQ92820 318 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 SNAPC3Q92966 411 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 NCLNQ969V3 563 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 KIAA1143Q96AT1 154 aaPredicted RBP3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 NAF1Q96HR8 494 aaKnown RBP3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 KIRREL1Q96J84 757 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 DCAF5Q96JK2 942 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 ANKRD27Q96NW4 1050 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 RASL10BQ96S79 203 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 C11orf70Q9BRQ4 267 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 TRMOQ9BU70 441 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 FTHL17Q9BXU8 183 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 ALOXE3Q9BYJ1 711 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 WWTR1Q9GZV5 400 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 DPAGT1Q9H3H5 408 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 MAGIXQ9H6Y5 334 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 COG4Q9H9E3 785 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 UPF2Q9HAU5 1272 aaKnown RBP3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 MBNL3Q9NUK0 354 aaKnown RBP3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 CISD1Q9NZ45 108 aaKnown RBP3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 VPS54Q9P1Q0 977 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 TXNDC16Q9P2K2 825 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 SLC9A2Q9UBY0 812 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 SH2B3Q9UQQ2 575 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 NIP7Q9Y221 180 aaKnown RBP eCLIP3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 GMEB1Q9Y692 573 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 IL16Q14005 1332 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 SPATA31A6Q5VVP1 1343 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 EMSYQ7Z589 1322 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 A0A0U1RQS6 177 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 NEMP2A6NFY4 417 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 ZNF879B4DU55 563 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 SUPT3HB4E1H0 165 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 PRSS46E5RG02 174 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 ALOX15BO15296 676 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 AKR7A2O43488 359 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 ECE2O60344 883 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 CIDEAO60543 219 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 MOCS2O96007 188 aaPredicted RBP3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 CSTAP01040 98 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 TGFB1P01137 390 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 CSF2P04141 144 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 RNASE1P07998 156 aaKnown RBP3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 NUDT17P0C025 328 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 STAG3L1P0CL83 205 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 CYP2D6P10635 497 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 ODC1P11926 461 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 APEHP13798 732 aaKnown RBP3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 GNSP15586 552 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 HRH2P25021 359 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 CHMLP26374 656 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 GMPRP36959 345 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 GPR12P47775 334 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 SLC11A1P49279 550 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 FNTAP49354 379 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 CEBPDP49716 269 aaPredicted RBP3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 SCNN1GP51170 649 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 RABGGTBP53611 331 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 NXPH1P58417 271 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 CBX1P83916 185 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 CCZ1BP86790 482 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 CCZ1P86791 482 aaPredicted RBP3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 MESP2Q0VG99 397 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 BST1Q10588 318 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 VEZF1Q14119 521 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 TRIP10Q15642 601 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 SSX2Q16385 188 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 DECR1Q16698 335 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 ANKRD55Q3KP44 614 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 GPAT3Q53EU6 434 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 MPPE1Q53F39 396 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 XKR3Q5GH77 459 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 C10orf120Q5SQS8 335 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 AGAP6Q5VW22 663 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 AAGABQ6PD74 315 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 ZNF474Q6S9Z5 364 aaPredicted RBP3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 OLFML1Q6UWY5 402 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 SYT10Q6XYQ8 523 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 TECPR1Q7Z6L1 1165 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 TMPRSS11BQ86T26 416 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 BIVMQ86UB2 503 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 COMTD1Q86VU5 262 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 TTC9BQ8N6N2 239 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 LINC00469Q8N7U9 141 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 MCPH1Q8NEM0 835 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 C17orf47Q8NEP4 570 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 OR9K2Q8NGE7 335 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 OR52N4Q8NGI2 321 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 MYCBPAPQ8TBZ2 947 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 PNPT1Q8TCS8 783 aaKnown RBP3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 SLC2A14Q8TDB8 520 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 ADAMTS14Q8WXS8 1223 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 HAS2Q92819 552 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 BOD1Q96IK1 185 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 BPIFA3Q9BQP9 254 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 NUP58Q9BVL2 599 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 TRMT61BQ9BVS5 477 aaKnown RBP3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 CCDC94Q9BW85 323 aaPredicted RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms