RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 NSMCE4AQ9NXX6 385 aa5.65□□□□□ -1.5
SCARNA6.1-201ENST00000516989 NINJ2Q9NZG7 142 aa5.65□□□□□ -1.5
SCARNA6.1-201ENST00000516989 H2AFY2Q9P0M6 372 aaPredicted RBP5.65□□□□□ -1.5
SCARNA6.1-201ENST00000516989 ZNF624Q9P2J8 865 aaPredicted RBP5.65□□□□□ -1.5
SCARNA6.1-201ENST00000516989 GALPQ9UBC7 116 aa5.65□□□□□ -1.5
SCARNA6.1-201ENST00000516989 CBLCQ9ULV8 474 aa5.65□□□□□ -1.5
SCARNA6.1-201ENST00000516989 ASF1AQ9Y294 204 aa5.65□□□□□ -1.5
SCARNA6.1-201ENST00000516989 COMMD10Q9Y6G5 202 aa5.65□□□□□ -1.5
SCARNA6.1-201ENST00000516989 RNF215Q9Y6U7 377 aa5.65□□□□□ -1.5
SCARNA6.1-201ENST00000516989 COLEC10Q9Y6Z7 277 aa5.65□□□□□ -1.5
SCARNA6.1-201ENST00000516989 U3KQA8 63 aa5.65□□□□□ -1.5
SCARNA6.1-201ENST00000516989 U3KQE9 123 aa5.65□□□□□ -1.5
SCARNA6.1-201ENST00000516989 EPG5Q9HCE0 2579 aa5.65□□□□□ -1.51
SCARNA6.1-201ENST00000516989 MYLKQ15746 1914 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 CNOT1A5YKK6 2376 aaKnown RBP5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 CEP250Q9BV73 2442 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 A0A087WUV0 522 aaPredicted RBP5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 PRAMEF33A0A0G2JMD5 474 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 SLC5A10A0PJK1 596 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 C7orf72A4D263 438 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 A6NCN8 305 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 B4GAT1O43505 415 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 NUDT21O43809 227 aaKnown RBP5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 GPC4O75487 556 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 FAM155BO75949 473 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 F13BP05160 661 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 RPLP0P05388 317 aaKnown RBP5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 GP1BAP07359 652 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 MTHFD1P11586 935 aaKnown RBP5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 CDK4P11802 303 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 JUPP14923 745 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 PNLIPP16233 465 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 MCM3P25205 808 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 AOAHP28039 575 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 SPRP35270 261 aaPredicted RBP5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 SKIV2L2P42285 1042 aaKnown RBP5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 MSH2P43246 934 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 FASLGP48023 281 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 ACADVLP49748 655 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 CLCN7P51798 805 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 SLC12A2P55011 1212 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 ADARP55265 1226 aaKnown RBP5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 OR1D5P58170 312 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 VSNL1P62760 191 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 RPL11P62913 178 aaKnown RBP5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 CCL7P80098 99 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 PRKG2Q13237 762 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 ILKQ13418 452 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 MLC1Q15049 377 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 UAP1Q16222 522 aaPredicted RBP5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 ACSBG2Q5FVE4 666 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 PLEKHS1Q5SXH7 462 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 RBM20Q5T481 1227 aaKnown RBP5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 N4BP2L1Q5TBK1 243 aaPredicted RBP5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 GRTP1Q5TC63 336 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 HECTD2Q5U5R9 776 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 NKAIN2Q5VXU1 208 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 CAPRIN2Q6IMN6 1127 aaKnown RBP5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 DUS1LQ6P1R4 473 aaKnown RBP5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 TTC23LQ6PF05 361 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 TMEM26Q6ZUK4 368 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 TRMT10CQ7L0Y3 403 aaKnown RBP5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 GLRX5Q86SX6 157 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 SLC26A11Q86WA9 606 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 VRK3Q8IV63 474 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 CHCHD4Q8N4Q1 142 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 ZBTB2Q8N680 514 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 AVL9Q8NBF6 648 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 SIDT2Q8NBJ9 832 aaKnown RBP5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 PMM1Q92871 262 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 ELMO2Q96JJ3 720 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 RMDN2Q96LZ7 410 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 FOPNLQ96NB1 174 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 CYTH2Q99418 400 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 GPR21Q99679 349 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 CPNE1Q99829 537 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 JAM3Q9BX67 310 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 TBC1D10AQ9BXI6 508 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 PARD6BQ9BYG5 372 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 OR52A5Q9H2C5 316 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 CDIP1Q9H305 208 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 LRRN3Q9H3W5 708 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 SLC40A1Q9NP59 571 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 POT1Q9NUX5 634 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 TAS2R13Q9NYV9 303 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 TRMT6Q9UJA5 497 aaKnown RBP5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 FBXL7Q9UJT9 491 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 SLC39A10Q9ULF5 831 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 TDRKHQ9Y2W6 561 aaKnown RBP5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 DHRS7Q9Y394 339 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 PCDHGA1Q9Y5H4 931 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 PSAT1Q9Y617 370 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 IKBKGQ9Y6K9 419 aa5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 KMT2BQ9UMN6 2715 aaPredicted RBP5.64□□□□□ -1.51
SCARNA6.1-201ENST00000516989 ARHGEF17Q96PE2 2063 aaPredicted RBP5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 ZFHX4Q86UP3 3567 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 A0A1W2PQM1 296 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 PRR19A6NJB7 356 aa5.63□□□□□ -1.51
SCARNA6.1-201ENST00000516989 FAM159BA6NKW6 160 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms